Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 Y_RNA.328-201ENST00000365208 113 ntBASIC2.07□□□□□ -2.08
CLK3P49761 SNORA2.2-201ENST00000365473 135 ntBASIC2.07□□□□□ -2.08
CLK3P49761 RNU6-1189P-201ENST00000383958 107 ntBASIC2.07□□□□□ -2.08
CLK3P49761 RNU6-756P-201ENST00000383997 107 ntBASIC2.07□□□□□ -2.08
CLK3P49761 Y_RNA.549-201ENST00000384657 102 ntBASIC2.07□□□□□ -2.08
CLK3P49761 RNY4P30-201ENST00000410216 95 ntBASIC2.07□□□□□ -2.08
CLK3P49761 RNA5SP450-201ENST00000411206 102 ntBASIC2.07□□□□□ -2.08
CLK3P49761 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
CLK3P49761 SNORA59A-201ENST00000459326 152 ntBASIC2.07□□□□□ -2.08
CLK3P49761 AL163195.1-201ENST00000496941 348 ntBASIC2.07□□□□□ -2.08
CLK3P49761 RNU6-240P-201ENST00000516098 97 ntBASIC2.07□□□□□ -2.08
CLK3P49761 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
CLK3P49761 AC005786.1-201ENST00000588553 154 ntBASIC2.07□□□□□ -2.08
CLK3P49761 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.07□□□□□ -2.08
CLK3P49761 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
CLK3P49761 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLK3P49761 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLK3P49761 RNA5SP289-201ENST00000362332 137 ntBASIC2.06□□□□□ -2.08
CLK3P49761 SNORD68-201ENST00000363214 84 ntBASIC2.06□□□□□ -2.08
CLK3P49761 RNY4P6-201ENST00000363667 96 ntBASIC2.06□□□□□ -2.08
CLK3P49761 SNORD115-28-201ENST00000363931 81 ntBASIC2.06□□□□□ -2.08
CLK3P49761 snoU2-30.1-201ENST00000365012 70 ntBASIC2.06□□□□□ -2.08
CLK3P49761 Y_RNA.323-201ENST00000365157 109 ntBASIC2.06□□□□□ -2.08
CLK3P49761 RNA5SP37-201ENST00000365420 130 ntBASIC2.06□□□□□ -2.08
CLK3P49761 RNU6-905P-201ENST00000384434 107 ntBASIC2.06□□□□□ -2.08
CLK3P49761 SNRPGP14-201ENST00000435400 219 ntBASIC2.06□□□□□ -2.08
CLK3P49761 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.06□□□□□ -2.08
CLK3P49761 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.06□□□□□ -2.08
CLK3P49761 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
CLK3P49761 AL589743.1-201ENST00000551932 2712 ntBASIC2.06□□□□□ -2.08
CLK3P49761 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLK3P49761 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLK3P49761 RNU6-349P-201ENST00000362402 107 ntBASIC2.05□□□□□ -2.08
CLK3P49761 RNU6-1084P-201ENST00000362498 107 ntBASIC2.05□□□□□ -2.08
CLK3P49761 Y_RNA.37-201ENST00000362606 108 ntBASIC2.05□□□□□ -2.08
CLK3P49761 RNU6-268P-201ENST00000364174 107 ntBASIC2.05□□□□□ -2.08
CLK3P49761 Y_RNA.213-201ENST00000364178 111 ntBASIC2.05□□□□□ -2.08
CLK3P49761 Y_RNA.336-201ENST00000365307 109 ntBASIC2.05□□□□□ -2.08
CLK3P49761 Y_RNA.348-201ENST00000365403 103 ntBASIC2.05□□□□□ -2.08
CLK3P49761 RNU6-1014P-201ENST00000383940 103 ntBASIC2.05□□□□□ -2.08
CLK3P49761 SNORA51.5-201ENST00000384126 131 ntBASIC2.05□□□□□ -2.08
CLK3P49761 Y_RNA.547-201ENST00000384654 119 ntBASIC2.05□□□□□ -2.08
CLK3P49761 MIR221-201ENST00000385135 110 ntBASIC2.05□□□□□ -2.08
CLK3P49761 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CLK3P49761 SNORA48.3-201ENST00000391081 134 ntBASIC2.05□□□□□ -2.08
CLK3P49761 MIR1302-4-201ENST00000408701 150 ntBASIC2.05□□□□□ -2.08
CLK3P49761 RNU6-717P-201ENST00000459076 104 ntBASIC2.05□□□□□ -2.08
CLK3P49761 RNA5SP200-201ENST00000516360 103 ntBASIC2.05□□□□□ -2.08
CLK3P49761 RNU7-25P-201ENST00000516544 62 ntBASIC2.05□□□□□ -2.08
CLK3P49761 AP001318.4-201ENST00000616637 121 ntBASIC2.05□□□□□ -2.08
CLK3P49761 AL590808.1-201ENST00000618696 141 ntBASIC2.05□□□□□ -2.08
CLK3P49761 AL035470.1-201ENST00000622571 220 ntBASIC2.05□□□□□ -2.08
CLK3P49761 RNU6-690P-201ENST00000365242 106 ntBASIC2.04□□□□□ -2.08
CLK3P49761 RNU6-1113P-201ENST00000384348 107 ntBASIC2.04□□□□□ -2.08
CLK3P49761 MIR759-201ENST00000390224 91 ntBASIC2.04□□□□□ -2.08
CLK3P49761 RNA5SP482-201ENST00000391269 118 ntBASIC2.04□□□□□ -2.08
CLK3P49761 RNU2-40P-201ENST00000410833 196 ntBASIC2.04□□□□□ -2.08
CLK3P49761 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.04□□□□□ -2.08
CLK3P49761 RPL39P34-201ENST00000477141 156 ntBASIC2.04□□□□□ -2.08
CLK3P49761 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.04□□□□□ -2.08
CLK3P49761 RNY4P20-201ENST00000516678 93 ntBASIC2.04□□□□□ -2.08
CLK3P49761 RNU7-28P-201ENST00000516759 62 ntBASIC2.04□□□□□ -2.08
CLK3P49761 RNU7-70P-201ENST00000516941 66 ntBASIC2.04□□□□□ -2.08
CLK3P49761 U1.36-201ENST00000620684 176 ntBASIC2.04□□□□□ -2.08
CLK3P49761 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CLK3P49761 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLK3P49761 RNU6-862P-201ENST00000362804 105 ntBASIC2.03□□□□□ -2.08
CLK3P49761 SNORA63.5-201ENST00000363548 123 ntBASIC2.03□□□□□ -2.08
CLK3P49761 RNU6-640P-201ENST00000363693 105 ntBASIC2.03□□□□□ -2.08
CLK3P49761 Y_RNA.362-201ENST00000365518 110 ntBASIC2.03□□□□□ -2.08
CLK3P49761 SNORA11.4-201ENST00000408823 129 ntBASIC2.03□□□□□ -2.08
CLK3P49761 RNA5SP425-201ENST00000410336 112 ntBASIC2.03□□□□□ -2.08
CLK3P49761 AL356379.1-201ENST00000414105 126 ntBASIC2.03□□□□□ -2.08
CLK3P49761 AL445646.1-201ENST00000431784 216 ntBASIC2.03□□□□□ -2.08
CLK3P49761 HMGN2P32-201ENST00000444648 269 ntBASIC2.03□□□□□ -2.08
CLK3P49761 TRBV12-1-201ENST00000479785 344 ntBASIC2.03□□□□□ -2.08
CLK3P49761 SNORD45.4-201ENST00000516629 73 ntBASIC2.03□□□□□ -2.08
CLK3P49761 AC021443.1-201ENST00000604478 211 ntBASIC2.03□□□□□ -2.08
CLK3P49761 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CLK3P49761 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CLK3P49761 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CLK3P49761 RNU1-133P-201ENST00000364867 167 ntBASIC2.02□□□□□ -2.09
CLK3P49761 Y_RNA.440-201ENST00000384120 114 ntBASIC2.02□□□□□ -2.09
CLK3P49761 RNY1P6-201ENST00000384193 109 ntBASIC2.02□□□□□ -2.09
CLK3P49761 MIR17-201ENST00000385012 84 ntBASIC2.02□□□□□ -2.09
CLK3P49761 RNA5SP501-201ENST00000410990 112 ntBASIC2.02□□□□□ -2.09
CLK3P49761 AC087499.4-201ENST00000448505 178 ntBASIC2.02□□□□□ -2.09
CLK3P49761 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.02□□□□□ -2.09
CLK3P49761 IGKV3-31-201ENST00000523109 329 ntBASIC2.02□□□□□ -2.09
CLK3P49761 AC024614.2-201ENST00000577584 372 ntBASIC2.02□□□□□ -2.09
CLK3P49761 AC022513.1-201ENST00000624512 117 ntBASIC2.02□□□□□ -2.09
CLK3P49761 AC064859.1-201ENST00000624741 174 ntBASIC2.02□□□□□ -2.09
CLK3P49761 RNU6-414P-201ENST00000363705 104 ntBASIC2.01□□□□□ -2.09
CLK3P49761 RNA5SP160-201ENST00000364866 120 ntBASIC2.01□□□□□ -2.09
CLK3P49761 Y_RNA.298-201ENST00000364960 107 ntBASIC2.01□□□□□ -2.09
CLK3P49761 Y_RNA.544-201ENST00000384650 113 ntBASIC2.01□□□□□ -2.09
CLK3P49761 SNORA48.1-201ENST00000390879 135 ntBASIC2.01□□□□□ -2.09
CLK3P49761 RNU6-938P-201ENST00000411285 103 ntBASIC2.01□□□□□ -2.09
CLK3P49761 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.01□□□□□ -2.09
CLK3P49761 AC245047.3-201ENST00000429428 127 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms