Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 Y_RNA.412-201ENST00000384001 104 ntBASIC1.44□□□□□ -2.18
CENPAP49450 AC108059.2-201ENST00000434626 151 ntBASIC1.44□□□□□ -2.18
CENPAP49450 RNU6-693P-201ENST00000516134 107 ntBASIC1.44□□□□□ -2.18
CENPAP49450 RNU6-947P-201ENST00000516264 106 ntBASIC1.44□□□□□ -2.18
CENPAP49450 RNU7-25P-201ENST00000516544 62 ntBASIC1.44□□□□□ -2.18
CENPAP49450 RNU6-504P-201ENST00000516568 104 ntBASIC1.44□□□□□ -2.18
CENPAP49450 Y_RNA.700-201ENST00000516806 100 ntBASIC1.44□□□□□ -2.18
CENPAP49450 RNU6-1270P-201ENST00000517128 108 ntBASIC1.44□□□□□ -2.18
CENPAP49450 RNU6-794P-201ENST00000517261 64 ntBASIC1.44□□□□□ -2.18
CENPAP49450 AC072026.1-201ENST00000605023 201 ntBASIC1.44□□□□□ -2.18
CENPAP49450 U6.106-201ENST00000636360 105 ntBASIC1.44□□□□□ -2.18
CENPAP49450 RNU6-275P-201ENST00000364910 107 ntBASIC1.43□□□□□ -2.18
CENPAP49450 Y_RNA.435-201ENST00000384095 112 ntBASIC1.43□□□□□ -2.18
CENPAP49450 AL627390.1-201ENST00000396055 340 ntBASIC1.43□□□□□ -2.18
CENPAP49450 RNA5SP153-201ENST00000516498 76 ntBASIC1.43□□□□□ -2.18
CENPAP49450 RNU6-902P-201ENST00000517212 91 ntBASIC1.43□□□□□ -2.18
CENPAP49450 MIR6845-201ENST00000613182 61 ntBASIC1.43□□□□□ -2.18
CENPAP49450 AL121890.5-201ENST00000620848 304 ntBASIC1.43□□□□□ -2.18
CENPAP49450 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.43□□□□□ -2.18
CENPAP49450 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CENPAP49450 SNORD61-201ENST00000384252 73 ntBASIC1.42□□□□□ -2.18
CENPAP49450 Y_RNA.547-201ENST00000384654 119 ntBASIC1.42□□□□□ -2.18
CENPAP49450 RNU6-1219P-201ENST00000516143 112 ntBASIC1.42□□□□□ -2.18
CENPAP49450 RNU6-197P-201ENST00000516680 100 ntBASIC1.42□□□□□ -2.18
CENPAP49450 RNU6-182P-201ENST00000516970 105 ntBASIC1.42□□□□□ -2.18
CENPAP49450 GHRLOS.1-201ENST00000610995 70 ntBASIC1.42□□□□□ -2.18
CENPAP49450 MIR26B-201ENST00000362251 77 ntBASIC1.41□□□□□ -2.18
CENPAP49450 Y_RNA.75-201ENST00000362927 97 ntBASIC1.41□□□□□ -2.18
CENPAP49450 SNORD24-201ENST00000383884 75 ntBASIC1.41□□□□□ -2.18
CENPAP49450 Y_RNA.785-201ENST00000384290 109 ntBASIC1.41□□□□□ -2.18
CENPAP49450 SNORD41-201ENST00000386967 70 ntBASIC1.41□□□□□ -2.18
CENPAP49450 U8.17-201ENST00000391292 132 ntBASIC1.41□□□□□ -2.18
CENPAP49450 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.41□□□□□ -2.18
CENPAP49450 SNORD123-201ENST00000459473 70 ntBASIC1.41□□□□□ -2.18
CENPAP49450 RPL30P7-201ENST00000479312 323 ntBASIC1.41□□□□□ -2.18
CENPAP49450 RNU6-830P-201ENST00000516353 107 ntBASIC1.41□□□□□ -2.18
CENPAP49450 MRPS18CP4-201ENST00000535821 231 ntBASIC1.41□□□□□ -2.18
CENPAP49450 AP000942.3-201ENST00000603702 160 ntBASIC1.41□□□□□ -2.18
CENPAP49450 AL357312.1-201ENST00000603879 298 ntBASIC1.41□□□□□ -2.18
CENPAP49450 AC004792.1-201ENST00000614523 137 ntBASIC1.41□□□□□ -2.18
CENPAP49450 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
CENPAP49450 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
CENPAP49450 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
CENPAP49450 RNU4-43P-201ENST00000410628 137 ntBASIC1.4□□□□□ -2.19
CENPAP49450 AC006461.1-201ENST00000412637 326 ntBASIC1.4□□□□□ -2.19
CENPAP49450 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.4□□□□□ -2.19
CENPAP49450 RNU6-861P-201ENST00000516745 106 ntBASIC1.4□□□□□ -2.19
CENPAP49450 SNORA74.3-201ENST00000517108 154 ntBASIC1.4□□□□□ -2.19
CENPAP49450 RNU7-181P-201ENST00000517234 74 ntBASIC1.4□□□□□ -2.19
CENPAP49450 AL512310.8-201ENST00000550183 120 ntBASIC1.4□□□□□ -2.19
CENPAP49450 MIR3664-201ENST00000579074 99 ntBASIC1.4□□□□□ -2.19
CENPAP49450 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CENPAP49450 SNORD115-28-201ENST00000363931 81 ntBASIC1.39□□□□□ -2.19
CENPAP49450 RNU6-643P-201ENST00000384018 107 ntBASIC1.39□□□□□ -2.19
CENPAP49450 MIR520C-201ENST00000385005 87 ntBASIC1.39□□□□□ -2.19
CENPAP49450 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.39□□□□□ -2.19
CENPAP49450 RPL39P39-201ENST00000455840 151 ntBASIC1.39□□□□□ -2.19
CENPAP49450 RNU7-120P-201ENST00000459334 63 ntBASIC1.39□□□□□ -2.19
CENPAP49450 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.39□□□□□ -2.19
CENPAP49450 Y_RNA.676-201ENST00000516393 96 ntBASIC1.39□□□□□ -2.19
CENPAP49450 SNORD111.1-201ENST00000516421 86 ntBASIC1.39□□□□□ -2.19
CENPAP49450 RN7SKP88-201ENST00000516847 250 ntBASIC1.39□□□□□ -2.19
CENPAP49450 CYP3A52P-201ENST00000563326 91 ntBASIC1.39□□□□□ -2.19
CENPAP49450 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.39□□□□□ -2.19
CENPAP49450 MIR3683-201ENST00000580847 82 ntBASIC1.39□□□□□ -2.19
CENPAP49450 MIR3668-201ENST00000582138 75 ntBASIC1.39□□□□□ -2.19
CENPAP49450 BX248123.2-201ENST00000606318 124 ntBASIC1.39□□□□□ -2.19
CENPAP49450 7SK.8-201ENST00000612110 250 ntBASIC1.39□□□□□ -2.19
CENPAP49450 7SK.11-201ENST00000615477 250 ntBASIC1.39□□□□□ -2.19
CENPAP49450 7SK.13-201ENST00000622040 250 ntBASIC1.39□□□□□ -2.19
CENPAP49450 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CENPAP49450 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CENPAP49450 Y_RNA.66-201ENST00000362862 102 ntBASIC1.38□□□□□ -2.19
CENPAP49450 RNU6-888P-201ENST00000363010 101 ntBASIC1.38□□□□□ -2.19
CENPAP49450 Y_RNA.521-201ENST00000384560 114 ntBASIC1.38□□□□□ -2.19
CENPAP49450 MIR518F-201ENST00000384973 87 ntBASIC1.38□□□□□ -2.19
CENPAP49450 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CENPAP49450 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CENPAP49450 Y_RNA.662-201ENST00000516028 97 ntBASIC1.38□□□□□ -2.19
CENPAP49450 AC007751.1-201ENST00000529260 376 ntBASIC1.38□□□□□ -2.19
CENPAP49450 SNORD53B-201ENST00000577887 78 ntBASIC1.38□□□□□ -2.19
CENPAP49450 MIR378D2-201ENST00000580636 98 ntBASIC1.38□□□□□ -2.19
CENPAP49450 Y_RNA.23-201ENST00000362496 106 ntBASIC1.37□□□□□ -2.19
CENPAP49450 RNU6-312P-201ENST00000364629 107 ntBASIC1.37□□□□□ -2.19
CENPAP49450 SNORA1.2-201ENST00000365189 134 ntBASIC1.37□□□□□ -2.19
CENPAP49450 Y_RNA.357-201ENST00000365487 109 ntBASIC1.37□□□□□ -2.19
CENPAP49450 RNU6-1067P-201ENST00000384752 107 ntBASIC1.37□□□□□ -2.19
CENPAP49450 CYCSP49-201ENST00000420810 319 ntBASIC1.37□□□□□ -2.19
CENPAP49450 SEPT7P4-201ENST00000437076 306 ntBASIC1.37□□□□□ -2.19
CENPAP49450 RNU4-57P-201ENST00000515980 135 ntBASIC1.37□□□□□ -2.19
CENPAP49450 SNORD116-25-201ENST00000516517 92 ntBASIC1.37□□□□□ -2.19
CENPAP49450 RNU7-43P-201ENST00000516554 64 ntBASIC1.37□□□□□ -2.19
CENPAP49450 MIR4431-201ENST00000579990 94 ntBASIC1.37□□□□□ -2.19
CENPAP49450 MIR548AR-201ENST00000582191 57 ntBASIC1.37□□□□□ -2.19
CENPAP49450 AC097639.2-201ENST00000603159 172 ntBASIC1.37□□□□□ -2.19
CENPAP49450 RNU1-17P-201ENST00000363022 152 ntBASIC1.36□□□□□ -2.19
CENPAP49450 Y_RNA.241-201ENST00000364470 117 ntBASIC1.36□□□□□ -2.19
CENPAP49450 Y_RNA.370-201ENST00000365589 108 ntBASIC1.36□□□□□ -2.19
CENPAP49450 SNORD28B-201ENST00000390993 75 ntBASIC1.36□□□□□ -2.19
CENPAP49450 AC107297.1-201ENST00000459991 176 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 260.8 ms