Protein–RNA interactions for Protein: P48436

SOX9, Transcription factor SOX-9, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9P48436 MIR548AI-201ENST00000579940 88 ntBASIC2.34□□□□□ -2.03
SOX9P48436 AC067747.1-201ENST00000608026 250 ntBASIC2.34□□□□□ -2.03
SOX9P48436 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SOX9P48436 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SOX9P48436 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.33□□□□□ -2.04
SOX9P48436 RNU6-203P-201ENST00000384038 104 ntBASIC2.33□□□□□ -2.04
SOX9P48436 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
SOX9P48436 U8.17-201ENST00000391292 132 ntBASIC2.33□□□□□ -2.04
SOX9P48436 AL023284.1-201ENST00000403956 276 ntBASIC2.33□□□□□ -2.04
SOX9P48436 RNU4-57P-201ENST00000515980 135 ntBASIC2.33□□□□□ -2.04
SOX9P48436 RNU6-548P-201ENST00000517083 115 ntBASIC2.33□□□□□ -2.04
SOX9P48436 IGLV3-17-201ENST00000519099 244 ntBASIC2.33□□□□□ -2.04
SOX9P48436 MIR5007-201ENST00000583098 95 ntBASIC2.33□□□□□ -2.04
SOX9P48436 FAM106DP-201ENST00000586416 501 ntBASIC2.33□□□□□ -2.04
SOX9P48436 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.33□□□□□ -2.04
SOX9P48436 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.33□□□□□ -2.04
SOX9P48436 MIR21-201ENST00000362134 72 ntBASIC2.32□□□□□ -2.04
SOX9P48436 AL627390.1-201ENST00000396055 340 ntBASIC2.32□□□□□ -2.04
SOX9P48436 AC008267.6-201ENST00000441664 139 ntBASIC2.32□□□□□ -2.04
SOX9P48436 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.32□□□□□ -2.04
SOX9P48436 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SOX9P48436 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.32□□□□□ -2.04
SOX9P48436 RNA5SP259-201ENST00000365541 109 ntBASIC2.31□□□□□ -2.04
SOX9P48436 RNU6-439P-201ENST00000384188 106 ntBASIC2.31□□□□□ -2.04
SOX9P48436 MIR513A1-201ENST00000385138 129 ntBASIC2.31□□□□□ -2.04
SOX9P48436 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SOX9P48436 SNORA40.5-201ENST00000391061 128 ntBASIC2.31□□□□□ -2.04
SOX9P48436 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.31□□□□□ -2.04
SOX9P48436 AL603825.1-201ENST00000438481 80 ntBASIC2.31□□□□□ -2.04
SOX9P48436 RNU7-80P-201ENST00000459562 61 ntBASIC2.31□□□□□ -2.04
SOX9P48436 RNU6-322P-201ENST00000516010 103 ntBASIC2.31□□□□□ -2.04
SOX9P48436 RNU7-181P-201ENST00000517234 74 ntBASIC2.31□□□□□ -2.04
SOX9P48436 AC121758.2-201ENST00000553271 193 ntBASIC2.31□□□□□ -2.04
SOX9P48436 AC022254.1-201ENST00000567857 235 ntBASIC2.31□□□□□ -2.04
SOX9P48436 MIR8074-201ENST00000615081 81 ntBASIC2.31□□□□□ -2.04
SOX9P48436 AC106754.2-201ENST00000623006 233 ntBASIC2.31□□□□□ -2.04
SOX9P48436 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SOX9P48436 RNU6-457P-201ENST00000363999 107 ntBASIC2.3□□□□□ -2.04
SOX9P48436 Y_RNA.351-201ENST00000365436 96 ntBASIC2.3□□□□□ -2.04
SOX9P48436 Y_RNA.454-201ENST00000384224 113 ntBASIC2.3□□□□□ -2.04
SOX9P48436 RNU6-1067P-201ENST00000384752 107 ntBASIC2.3□□□□□ -2.04
SOX9P48436 RNA5SP247-201ENST00000411181 105 ntBASIC2.3□□□□□ -2.04
SOX9P48436 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.3□□□□□ -2.04
SOX9P48436 AL022345.2-201ENST00000606307 135 ntBASIC2.3□□□□□ -2.04
SOX9P48436 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-34-201ENST00000362441 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-12-201ENST00000362583 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-29-201ENST00000362834 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-9-201ENST00000362912 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-21-201ENST00000362963 81 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-14-201ENST00000363090 81 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-13-201ENST00000363358 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-41-201ENST00000363608 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-11-201ENST00000363616 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-5-201ENST00000363633 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-39-201ENST00000363694 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-4-201ENST00000363810 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-16-201ENST00000363887 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-6-201ENST00000363942 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-42-201ENST00000364273 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-15-201ENST00000364809 81 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-1-201ENST00000364961 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-26-201ENST00000365067 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-10-201ENST00000365073 81 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-43-201ENST00000365503 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-36-201ENST00000365629 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 Y_RNA.440-201ENST00000384120 114 ntBASIC2.29□□□□□ -2.04
SOX9P48436 RNU6-80P-201ENST00000384195 107 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SNORA27-201ENST00000384323 126 ntBASIC2.29□□□□□ -2.04
SOX9P48436 RNU6-22P-201ENST00000384355 107 ntBASIC2.29□□□□□ -2.04
SOX9P48436 MIR526A1-201ENST00000384897 85 ntBASIC2.29□□□□□ -2.04
SOX9P48436 RNU6-938P-201ENST00000411285 103 ntBASIC2.29□□□□□ -2.04
SOX9P48436 RNU6-313P-201ENST00000516317 112 ntBASIC2.29□□□□□ -2.04
SOX9P48436 RNU2-60P-201ENST00000517290 128 ntBASIC2.29□□□□□ -2.04
SOX9P48436 AC090821.2-201ENST00000523552 176 ntBASIC2.29□□□□□ -2.04
SOX9P48436 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.29□□□□□ -2.04
SOX9P48436 SNORD115-40-201ENST00000606510 82 ntBASIC2.29□□□□□ -2.04
SOX9P48436 MIR6895-201ENST00000613497 78 ntBASIC2.29□□□□□ -2.04
SOX9P48436 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SOX9P48436 RNU6-309P-201ENST00000364573 106 ntBASIC2.28□□□□□ -2.04
SOX9P48436 RNU1-133P-201ENST00000364867 167 ntBASIC2.28□□□□□ -2.04
SOX9P48436 Y_RNA.370-201ENST00000365589 108 ntBASIC2.28□□□□□ -2.04
SOX9P48436 SNORA70.7-201ENST00000384159 133 ntBASIC2.28□□□□□ -2.04
SOX9P48436 MIR194-1-201ENST00000384892 85 ntBASIC2.28□□□□□ -2.04
SOX9P48436 MIR548I2-201ENST00000408348 149 ntBASIC2.28□□□□□ -2.04
SOX9P48436 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.28□□□□□ -2.04
SOX9P48436 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.28□□□□□ -2.04
SOX9P48436 AL021397.1-201ENST00000451806 248 ntBASIC2.28□□□□□ -2.04
SOX9P48436 SCARNA15-202ENST00000516881 127 ntBASIC2.28□□□□□ -2.04
SOX9P48436 SNORA44.1-201ENST00000517031 108 ntBASIC2.28□□□□□ -2.04
SOX9P48436 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.28□□□□□ -2.04
SOX9P48436 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SOX9P48436 ZNF720P1-201ENST00000562403 1939 ntBASIC2.27□□□□□ -2.05
SOX9P48436 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SOX9P48436 MIR302B-201ENST00000362188 73 ntBASIC2.27□□□□□ -2.05
SOX9P48436 MIR342-201ENST00000362212 99 ntBASIC2.27□□□□□ -2.05
SOX9P48436 Y_RNA.71-201ENST00000362892 104 ntBASIC2.27□□□□□ -2.05
SOX9P48436 RNU6-647P-201ENST00000364243 107 ntBASIC2.27□□□□□ -2.05
SOX9P48436 MIR144-201ENST00000384886 86 ntBASIC2.27□□□□□ -2.05
SOX9P48436 RNU6-1154P-201ENST00000391001 104 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms