Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SNORA79-201ENST00000408376 140 ntBASIC1.83□□□□□ -2.12
COL15A1P39059 PGBD4P5-201ENST00000445958 426 ntBASIC1.83□□□□□ -2.12
COL15A1P39059 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.83□□□□□ -2.12
COL15A1P39059 SNORD45.4-201ENST00000516629 73 ntBASIC1.83□□□□□ -2.12
COL15A1P39059 RNU6-1116P-201ENST00000517269 99 ntBASIC1.83□□□□□ -2.12
COL15A1P39059 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.83□□□□□ -2.12
COL15A1P39059 AC022254.1-201ENST00000567857 235 ntBASIC1.83□□□□□ -2.12
COL15A1P39059 AL513423.1-201ENST00000621695 132 ntBASIC1.83□□□□□ -2.12
COL15A1P39059 SNORD3E-202ENST00000627253 216 ntBASIC1.83□□□□□ -2.12
COL15A1P39059 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
COL15A1P39059 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL15A1P39059 SNORD50B-201ENST00000364995 70 ntBASIC1.82□□□□□ -2.12
COL15A1P39059 MIR891A-201ENST00000401237 79 ntBASIC1.82□□□□□ -2.12
COL15A1P39059 MIR1304-201ENST00000408243 91 ntBASIC1.82□□□□□ -2.12
COL15A1P39059 MIR1267-201ENST00000408723 78 ntBASIC1.82□□□□□ -2.12
COL15A1P39059 AC114811.1-201ENST00000507207 168 ntBASIC1.82□□□□□ -2.12
COL15A1P39059 Y_RNA.662-201ENST00000516028 97 ntBASIC1.82□□□□□ -2.12
COL15A1P39059 RNU6-1299P-201ENST00000516316 100 ntBASIC1.82□□□□□ -2.12
COL15A1P39059 RNU6-861P-201ENST00000516745 106 ntBASIC1.82□□□□□ -2.12
COL15A1P39059 AC109810.1-201ENST00000534066 224 ntBASIC1.82□□□□□ -2.12
COL15A1P39059 MIR4662B-201ENST00000579498 81 ntBASIC1.82□□□□□ -2.12
COL15A1P39059 AC108706.1-201ENST00000611053 297 ntBASIC1.82□□□□□ -2.12
COL15A1P39059 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.82□□□□□ -2.12
COL15A1P39059 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.82□□□□□ -2.12
COL15A1P39059 U8.1-201ENST00000362843 134 ntBASIC1.81□□□□□ -2.12
COL15A1P39059 RNU6-442P-201ENST00000383968 104 ntBASIC1.81□□□□□ -2.12
COL15A1P39059 Y_RNA.412-201ENST00000384001 104 ntBASIC1.81□□□□□ -2.12
COL15A1P39059 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
COL15A1P39059 RNU2-64P-201ENST00000411315 191 ntBASIC1.81□□□□□ -2.12
COL15A1P39059 HMGN2P32-201ENST00000444648 269 ntBASIC1.81□□□□□ -2.12
COL15A1P39059 AC099513.1-201ENST00000490423 301 ntBASIC1.81□□□□□ -2.12
COL15A1P39059 RNU6-1219P-201ENST00000516143 112 ntBASIC1.81□□□□□ -2.12
COL15A1P39059 SNORD77.4-201ENST00000516158 81 ntBASIC1.81□□□□□ -2.12
COL15A1P39059 RNU6-126P-201ENST00000516685 103 ntBASIC1.81□□□□□ -2.12
COL15A1P39059 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.81□□□□□ -2.12
COL15A1P39059 AC008507.4-201ENST00000585464 127 ntBASIC1.81□□□□□ -2.12
COL15A1P39059 AC098479.1-201ENST00000609225 154 ntBASIC1.81□□□□□ -2.12
COL15A1P39059 U6.106-201ENST00000636360 105 ntBASIC1.81□□□□□ -2.12
COL15A1P39059 MIR424-201ENST00000362227 98 ntBASIC1.8□□□□□ -2.12
COL15A1P39059 RNU6-275P-201ENST00000364910 107 ntBASIC1.8□□□□□ -2.12
COL15A1P39059 Y_RNA.432-201ENST00000384087 111 ntBASIC1.8□□□□□ -2.12
COL15A1P39059 MIR15B-201ENST00000385045 98 ntBASIC1.8□□□□□ -2.12
COL15A1P39059 RNU2-70P-201ENST00000410718 179 ntBASIC1.8□□□□□ -2.12
COL15A1P39059 RNU2-55P-201ENST00000411146 174 ntBASIC1.8□□□□□ -2.12
COL15A1P39059 JTBP1-201ENST00000441314 247 ntBASIC1.8□□□□□ -2.12
COL15A1P39059 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
COL15A1P39059 MIR4778-201ENST00000577635 80 ntBASIC1.8□□□□□ -2.12
COL15A1P39059 MIR8074-201ENST00000615081 81 ntBASIC1.8□□□□□ -2.12
COL15A1P39059 AC027279.3-201ENST00000625055 122 ntBASIC1.8□□□□□ -2.12
COL15A1P39059 MIRLET7C-201ENST00000362160 84 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 RNU6-1123P-201ENST00000362347 106 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 Y_RNA.75-201ENST00000362927 97 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 SNORD45.3-201ENST00000363836 72 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 RNU6-203P-201ENST00000384038 104 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 MIR30A-201ENST00000385092 71 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 MIR660-201ENST00000385235 97 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 SNORD72-201ENST00000390994 80 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 SNORA26-201ENST00000391286 122 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 RPL31P63-201ENST00000422565 375 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 SNRPGP8-201ENST00000454064 226 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 RNU6-561P-201ENST00000516222 102 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 MRPS18CP4-201ENST00000535821 231 ntBASIC1.79□□□□□ -2.12
COL15A1P39059 MIR96-201ENST00000362288 78 ntBASIC1.78□□□□□ -2.12
COL15A1P39059 RNU6-833P-201ENST00000363486 107 ntBASIC1.78□□□□□ -2.12
COL15A1P39059 Y_RNA.336-201ENST00000365307 109 ntBASIC1.78□□□□□ -2.12
COL15A1P39059 RNU6-1138P-201ENST00000365359 106 ntBASIC1.78□□□□□ -2.12
COL15A1P39059 AC093850.1-201ENST00000454121 251 ntBASIC1.78□□□□□ -2.12
COL15A1P39059 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.78□□□□□ -2.12
COL15A1P39059 AP000648.3-201ENST00000623539 4507 ntBASIC1.78□□□□□ -2.13
COL15A1P39059 Y_RNA.150-201ENST00000363562 102 ntBASIC1.77□□□□□ -2.13
COL15A1P39059 RNU6-682P-201ENST00000363843 106 ntBASIC1.77□□□□□ -2.13
COL15A1P39059 RNU6-312P-201ENST00000364629 107 ntBASIC1.77□□□□□ -2.13
COL15A1P39059 Y_RNA.357-201ENST00000365487 109 ntBASIC1.77□□□□□ -2.13
COL15A1P39059 AC008834.1-201ENST00000511612 175 ntBASIC1.77□□□□□ -2.13
COL15A1P39059 SUMO2P16-201ENST00000519475 264 ntBASIC1.77□□□□□ -2.13
COL15A1P39059 MIR6078-201ENST00000611069 100 ntBASIC1.77□□□□□ -2.13
COL15A1P39059 FTX_2.1-201ENST00000618816 94 ntBASIC1.77□□□□□ -2.13
COL15A1P39059 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL15A1P39059 Y_RNA.23-201ENST00000362496 106 ntBASIC1.76□□□□□ -2.13
COL15A1P39059 Y_RNA.68-201ENST00000362881 102 ntBASIC1.76□□□□□ -2.13
COL15A1P39059 Y_RNA.240-201ENST00000364469 95 ntBASIC1.76□□□□□ -2.13
COL15A1P39059 RNA5SP259-201ENST00000365541 109 ntBASIC1.76□□□□□ -2.13
COL15A1P39059 SNORD38C-201ENST00000384381 69 ntBASIC1.76□□□□□ -2.13
COL15A1P39059 Y_RNA.486-201ENST00000384398 107 ntBASIC1.76□□□□□ -2.13
COL15A1P39059 RN7SKP51-201ENST00000410781 304 ntBASIC1.76□□□□□ -2.13
COL15A1P39059 AC004223.1-201ENST00000479840 271 ntBASIC1.76□□□□□ -2.13
COL15A1P39059 RNU6-365P-201ENST00000517113 106 ntBASIC1.76□□□□□ -2.13
COL15A1P39059 MIR3198-2-201ENST00000577868 80 ntBASIC1.76□□□□□ -2.13
COL15A1P39059 MIR3660-201ENST00000584845 100 ntBASIC1.76□□□□□ -2.13
COL15A1P39059 Y_RNA.393-201ENST00000383936 102 ntBASIC1.75□□□□□ -2.13
COL15A1P39059 AC006461.1-201ENST00000412637 326 ntBASIC1.75□□□□□ -2.13
COL15A1P39059 SEPT7P4-201ENST00000437076 306 ntBASIC1.75□□□□□ -2.13
COL15A1P39059 RNA5SP476-201ENST00000516613 103 ntBASIC1.75□□□□□ -2.13
COL15A1P39059 RNU6-1223P-201ENST00000517124 104 ntBASIC1.75□□□□□ -2.13
COL15A1P39059 AC103810.8-201ENST00000607347 118 ntBASIC1.75□□□□□ -2.13
COL15A1P39059 RNU1-93P-201ENST00000364704 169 ntBASIC1.74□□□□□ -2.13
COL15A1P39059 RNU6-484P-201ENST00000384016 107 ntBASIC1.74□□□□□ -2.13
COL15A1P39059 MIR452-201ENST00000385020 85 ntBASIC1.74□□□□□ -2.13
COL15A1P39059 MIR513A1-201ENST00000385138 129 ntBASIC1.74□□□□□ -2.13
COL15A1P39059 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms