Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 Y_RNA.666-201ENST00000516187 112 ntBASIC1.47□□□□□ -2.17
TIMP3P35625 RNA5SP168-201ENST00000516642 112 ntBASIC1.47□□□□□ -2.17
TIMP3P35625 SNORA31.17-201ENST00000516953 127 ntBASIC1.47□□□□□ -2.17
TIMP3P35625 RNU6-1116P-201ENST00000517269 99 ntBASIC1.47□□□□□ -2.17
TIMP3P35625 AC120024.3-201ENST00000603167 156 ntBASIC1.47□□□□□ -2.17
TIMP3P35625 snoU13.31-201ENST00000607291 104 ntBASIC1.47□□□□□ -2.17
TIMP3P35625 MIRLET7C-201ENST00000362160 84 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 RNU6-661P-201ENST00000362409 107 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 Y_RNA.66-201ENST00000362862 102 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 RNU6-978P-201ENST00000364371 103 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 Y_RNA.336-201ENST00000365307 109 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 Y_RNA.343-201ENST00000365354 112 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 RNU6-597P-201ENST00000365620 102 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 MIR613-201ENST00000385248 95 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 MIR934-201ENST00000401241 83 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 MIR513C-201ENST00000401352 84 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 BTF3P4-201ENST00000418852 495 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 HMGN2P32-201ENST00000444648 269 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 CYCTP-201ENST00000504253 315 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 AC112693.2-201ENST00000556538 232 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 MIR548X2-201ENST00000579776 100 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 AC021506.2-201ENST00000612354 169 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 AC027279.3-201ENST00000625055 122 ntBASIC1.46□□□□□ -2.18
TIMP3P35625 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TIMP3P35625 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.45□□□□□ -2.18
TIMP3P35625 SNORD61-201ENST00000384252 73 ntBASIC1.45□□□□□ -2.18
TIMP3P35625 RNU6-424P-201ENST00000384367 105 ntBASIC1.45□□□□□ -2.18
TIMP3P35625 RNU6-360P-201ENST00000390944 104 ntBASIC1.45□□□□□ -2.18
TIMP3P35625 SNORA75.5-201ENST00000391291 81 ntBASIC1.45□□□□□ -2.18
TIMP3P35625 RNU6-588P-201ENST00000410281 105 ntBASIC1.45□□□□□ -2.18
TIMP3P35625 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.45□□□□□ -2.18
TIMP3P35625 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.45□□□□□ -2.18
TIMP3P35625 SNRPGP13-201ENST00000442212 177 ntBASIC1.45□□□□□ -2.18
TIMP3P35625 RNU7-12P-201ENST00000516030 62 ntBASIC1.45□□□□□ -2.18
TIMP3P35625 RNU6-693P-201ENST00000516134 107 ntBASIC1.45□□□□□ -2.18
TIMP3P35625 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.45□□□□□ -2.18
TIMP3P35625 MIR4713-201ENST00000582691 75 ntBASIC1.45□□□□□ -2.18
TIMP3P35625 AC006441.5-201ENST00000612680 209 ntBASIC1.45□□□□□ -2.18
TIMP3P35625 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TIMP3P35625 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TIMP3P35625 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TIMP3P35625 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.45□□□□□ -2.18
TIMP3P35625 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TIMP3P35625 RNU6-268P-201ENST00000364174 107 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 SNORD24-201ENST00000383884 75 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 Y_RNA.497-201ENST00000384447 98 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 RNU6-997P-201ENST00000384725 107 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 MIR891A-201ENST00000401237 79 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 RNU4-62P-201ENST00000410125 130 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 AP1B1P2-201ENST00000416196 106 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 RNU6-1053P-201ENST00000515930 101 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 SNORA25.12-201ENST00000516202 82 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 RNU6-1270P-201ENST00000517128 108 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.44□□□□□ -2.18
TIMP3P35625 MIR3198-2-201ENST00000577868 80 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 MIR4303-201ENST00000581299 66 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 AL512598.1-201ENST00000610158 273 ntBASIC1.44□□□□□ -2.18
TIMP3P35625 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
TIMP3P35625 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.43□□□□□ -2.18
TIMP3P35625 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TIMP3P35625 RNU6-888P-201ENST00000363010 101 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 RNU6-833P-201ENST00000363486 107 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 RNU6-704P-201ENST00000364162 103 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 RNU6-1082P-201ENST00000364574 107 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 SNORD50.2-201ENST00000365465 70 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 RNU6-1336P-201ENST00000383886 109 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 MIR569-201ENST00000385228 96 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.43□□□□□ -2.18
TIMP3P35625 AC099513.1-201ENST00000490423 301 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 RNU6-426P-201ENST00000516464 97 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 SNORA44.1-201ENST00000517031 108 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 RNU6-789P-201ENST00000517105 102 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.43□□□□□ -2.18
TIMP3P35625 AC090142.3-201ENST00000519012 385 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 AC007751.1-201ENST00000529260 376 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.43□□□□□ -2.18
TIMP3P35625 AP001485.1-201ENST00000604799 199 ntBASIC1.43□□□□□ -2.18
TIMP3P35625 SNORD48-201ENST00000364953 64 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 SNORA1-201ENST00000384107 130 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 SNORD38C-201ENST00000384381 69 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 Y_RNA.568-201ENST00000384742 113 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 MIR517C-201ENST00000385103 95 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 MIR548O-201ENST00000408583 114 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.42□□□□□ -2.18
TIMP3P35625 SNRPGP14-201ENST00000435400 219 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 TMSB4XP3-201ENST00000445144 114 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 PGBD4P5-201ENST00000445958 426 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 RNA5SP272-201ENST00000516095 111 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 Y_RNA.676-201ENST00000516393 96 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 SNORA18.4-201ENST00000516440 124 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 DNAJC19P9-201ENST00000555084 351 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 MIR3910-1-201ENST00000580936 111 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 MIR3129-201ENST00000581095 76 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 AL513423.1-201ENST00000621695 132 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 SNORD3E-202ENST00000627253 216 ntBASIC1.42□□□□□ -2.18
TIMP3P35625 MIR424-201ENST00000362227 98 ntBASIC1.41□□□□□ -2.18
TIMP3P35625 RNU6-60P-201ENST00000364792 103 ntBASIC1.41□□□□□ -2.18
TIMP3P35625 Y_RNA.542-201ENST00000384641 111 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms