Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
CTPS1P17812 SNORA81.3-201ENST00000517283 198 ntBASIC1.48□□□□□ -2.17
CTPS1P17812 AC090049.2-201ENST00000550377 109 ntBASIC1.48□□□□□ -2.17
CTPS1P17812 FAM106DP-201ENST00000586416 501 ntBASIC1.48□□□□□ -2.17
CTPS1P17812 AP001485.1-201ENST00000604799 199 ntBASIC1.48□□□□□ -2.17
CTPS1P17812 AC072026.1-201ENST00000605023 201 ntBASIC1.48□□□□□ -2.17
CTPS1P17812 AC015726.2-201ENST00000620112 122 ntBASIC1.48□□□□□ -2.17
CTPS1P17812 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CTPS1P17812 Y_RNA.75-201ENST00000362927 97 ntBASIC1.47□□□□□ -2.17
CTPS1P17812 RNU6-275P-201ENST00000364910 107 ntBASIC1.47□□□□□ -2.17
CTPS1P17812 Y_RNA.412-201ENST00000384001 104 ntBASIC1.47□□□□□ -2.17
CTPS1P17812 RNU6-1065P-201ENST00000384513 106 ntBASIC1.47□□□□□ -2.17
CTPS1P17812 MIR15B-201ENST00000385045 98 ntBASIC1.47□□□□□ -2.17
CTPS1P17812 AL451046.2-201ENST00000403074 277 ntBASIC1.47□□□□□ -2.17
CTPS1P17812 SNORA79-201ENST00000408376 140 ntBASIC1.47□□□□□ -2.17
CTPS1P17812 SNX2P2-201ENST00000424553 323 ntBASIC1.47□□□□□ -2.17
CTPS1P17812 RNA5SP153-201ENST00000516498 76 ntBASIC1.47□□□□□ -2.17
CTPS1P17812 RNU6-922P-201ENST00000516753 99 ntBASIC1.47□□□□□ -2.17
CTPS1P17812 RNU6-365P-201ENST00000517113 106 ntBASIC1.47□□□□□ -2.17
CTPS1P17812 AC022559.1-201ENST00000520905 205 ntBASIC1.47□□□□□ -2.17
CTPS1P17812 Y_RNA.634-201ENST00000364811 113 ntBASIC1.46□□□□□ -2.18
CTPS1P17812 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
CTPS1P17812 MIR548O-201ENST00000408583 114 ntBASIC1.46□□□□□ -2.18
CTPS1P17812 RNU4-43P-201ENST00000410628 137 ntBASIC1.46□□□□□ -2.18
CTPS1P17812 SNRPGP13-201ENST00000442212 177 ntBASIC1.46□□□□□ -2.18
CTPS1P17812 RNU1-98P-201ENST00000458992 160 ntBASIC1.46□□□□□ -2.18
CTPS1P17812 Y_RNA.666-201ENST00000516187 112 ntBASIC1.46□□□□□ -2.18
CTPS1P17812 RNU6-197P-201ENST00000516680 100 ntBASIC1.46□□□□□ -2.18
CTPS1P17812 AL160236.1-201ENST00000556317 195 ntBASIC1.46□□□□□ -2.18
CTPS1P17812 AL513534.2-201ENST00000603836 250 ntBASIC1.46□□□□□ -2.18
CTPS1P17812 AL121890.5-201ENST00000620848 304 ntBASIC1.46□□□□□ -2.18
CTPS1P17812 U6.106-201ENST00000636360 105 ntBASIC1.46□□□□□ -2.18
CTPS1P17812 AL442644.1-201ENST00000454390 3105 ntBASIC1.45□□□□□ -2.18
CTPS1P17812 Y_RNA.91-201ENST00000363042 107 ntBASIC1.45□□□□□ -2.18
CTPS1P17812 RNU7-120P-201ENST00000459334 63 ntBASIC1.45□□□□□ -2.18
CTPS1P17812 RNU6-1219P-201ENST00000516143 112 ntBASIC1.45□□□□□ -2.18
CTPS1P17812 RNU7-25P-201ENST00000516544 62 ntBASIC1.45□□□□□ -2.18
CTPS1P17812 MRPS18CP4-201ENST00000535821 231 ntBASIC1.45□□□□□ -2.18
CTPS1P17812 AC097639.2-201ENST00000603159 172 ntBASIC1.45□□□□□ -2.18
CTPS1P17812 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.45□□□□□ -2.18
CTPS1P17812 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.44□□□□□ -2.18
CTPS1P17812 SNORD24-201ENST00000383884 75 ntBASIC1.44□□□□□ -2.18
CTPS1P17812 SNORD41-201ENST00000386967 70 ntBASIC1.44□□□□□ -2.18
CTPS1P17812 RNU6-830P-201ENST00000516353 107 ntBASIC1.44□□□□□ -2.18
CTPS1P17812 RNU6-504P-201ENST00000516568 104 ntBASIC1.44□□□□□ -2.18
CTPS1P17812 RNU1-92P-201ENST00000517017 135 ntBASIC1.44□□□□□ -2.18
CTPS1P17812 MIR3668-201ENST00000582138 75 ntBASIC1.44□□□□□ -2.18
CTPS1P17812 AC004792.1-201ENST00000614523 137 ntBASIC1.44□□□□□ -2.18
CTPS1P17812 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.44□□□□□ -2.18
CTPS1P17812 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CTPS1P17812 MIR378A-201ENST00000362177 66 ntBASIC1.43□□□□□ -2.18
CTPS1P17812 Y_RNA.66-201ENST00000362862 102 ntBASIC1.43□□□□□ -2.18
CTPS1P17812 BTF3P4-201ENST00000418852 495 ntBASIC1.43□□□□□ -2.18
CTPS1P17812 RPL30P7-201ENST00000479312 323 ntBASIC1.43□□□□□ -2.18
CTPS1P17812 SNORA18.7-201ENST00000516910 131 ntBASIC1.43□□□□□ -2.18
CTPS1P17812 RNU6-182P-201ENST00000516970 105 ntBASIC1.43□□□□□ -2.18
CTPS1P17812 RNU6-1270P-201ENST00000517128 108 ntBASIC1.43□□□□□ -2.18
CTPS1P17812 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CTPS1P17812 Y_RNA.23-201ENST00000362496 106 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 RNU6-888P-201ENST00000363010 101 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 Y_RNA.338-201ENST00000365320 114 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 RNU6-643P-201ENST00000384018 107 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 SNORD61-201ENST00000384252 73 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 Y_RNA.547-201ENST00000384654 119 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 MIR548A2-201ENST00000384956 97 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 RNU7-95P-201ENST00000459222 64 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 SNORD123-201ENST00000459473 70 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.42□□□□□ -2.18
CTPS1P17812 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.42□□□□□ -2.18
CTPS1P17812 RNU6-693P-201ENST00000516134 107 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 AL357312.1-201ENST00000603879 298 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 AL512598.1-201ENST00000610158 273 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 GHRLOS.1-201ENST00000610995 70 ntBASIC1.42□□□□□ -2.18
CTPS1P17812 ZNF209P-201ENST00000593450 2304 ntBASIC1.41□□□□□ -2.18
CTPS1P17812 RNU6-312P-201ENST00000364629 107 ntBASIC1.41□□□□□ -2.18
CTPS1P17812 MIR518F-201ENST00000384973 87 ntBASIC1.41□□□□□ -2.18
CTPS1P17812 SNORD111.1-201ENST00000516421 86 ntBASIC1.41□□□□□ -2.18
CTPS1P17812 RNU6-861P-201ENST00000516745 106 ntBASIC1.41□□□□□ -2.18
CTPS1P17812 SNORA74.3-201ENST00000517108 154 ntBASIC1.41□□□□□ -2.18
CTPS1P17812 AL512310.8-201ENST00000550183 120 ntBASIC1.41□□□□□ -2.18
CTPS1P17812 U8.1-201ENST00000362843 134 ntBASIC1.4□□□□□ -2.19
CTPS1P17812 RNU6-682P-201ENST00000363843 106 ntBASIC1.4□□□□□ -2.19
CTPS1P17812 SNORD115-28-201ENST00000363931 81 ntBASIC1.4□□□□□ -2.19
CTPS1P17812 Y_RNA.240-201ENST00000364469 95 ntBASIC1.4□□□□□ -2.19
CTPS1P17812 AC006461.1-201ENST00000412637 326 ntBASIC1.4□□□□□ -2.19
CTPS1P17812 RNU4-57P-201ENST00000515980 135 ntBASIC1.4□□□□□ -2.19
CTPS1P17812 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
CTPS1P17812 AC007751.1-201ENST00000529260 376 ntBASIC1.4□□□□□ -2.19
CTPS1P17812 MIR4431-201ENST00000579990 94 ntBASIC1.4□□□□□ -2.19
CTPS1P17812 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.4□□□□□ -2.19
CTPS1P17812 U8.17-201ENST00000391292 132 ntBASIC1.39□□□□□ -2.19
CTPS1P17812 RNU2-64P-201ENST00000411315 191 ntBASIC1.39□□□□□ -2.19
CTPS1P17812 AP1B1P2-201ENST00000416196 106 ntBASIC1.39□□□□□ -2.19
CTPS1P17812 SEPT7P4-201ENST00000437076 306 ntBASIC1.39□□□□□ -2.19
CTPS1P17812 AC108729.3-201ENST00000513484 108 ntBASIC1.39□□□□□ -2.19
CTPS1P17812 Y_RNA.662-201ENST00000516028 97 ntBASIC1.39□□□□□ -2.19
CTPS1P17812 MIR3664-201ENST00000579074 99 ntBASIC1.39□□□□□ -2.19
CTPS1P17812 MIR378D2-201ENST00000580636 98 ntBASIC1.39□□□□□ -2.19
CTPS1P17812 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CTPS1P17812 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms