Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CYCSP46-201ENST00000423569 204 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 USMG5P1-201ENST00000425964 177 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 EIF1P2-201ENST00000428233 350 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.62□□□□□ -2.67
HIST1H1DP16402 RNU7-55P-201ENST00000459426 62 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.62□□□□□ -2.67
HIST1H1DP16402 MIR5188-201ENST00000583467 113 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 AL158050.2-201ENST00000605336 568 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.63□□□□□ -2.67
HIST1H1DP16402 RNU1-141P-201ENST00000364623 158 ntBASIC-1.63□□□□□ -2.67
HIST1H1DP16402 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.63□□□□□ -2.67
HIST1H1DP16402 MIR587-201ENST00000384845 96 ntBASIC-1.63□□□□□ -2.67
HIST1H1DP16402 SNORA40.5-201ENST00000391061 128 ntBASIC-1.63□□□□□ -2.67
HIST1H1DP16402 RNU7-116P-201ENST00000516940 62 ntBASIC-1.63□□□□□ -2.67
HIST1H1DP16402 MIR4306-201ENST00000583390 91 ntBASIC-1.63□□□□□ -2.67
HIST1H1DP16402 AC092747.3-201ENST00000603769 301 ntBASIC-1.63□□□□□ -2.67
HIST1H1DP16402 AC073534.2-201ENST00000620377 381 ntBASIC-1.63□□□□□ -2.67
HIST1H1DP16402 AC091931.1-201ENST00000623488 728 ntBASIC-1.63□□□□□ -2.67
HIST1H1DP16402 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.64□□□□□ -2.67
HIST1H1DP16402 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.64□□□□□ -2.67
HIST1H1DP16402 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.64□□□□□ -2.67
HIST1H1DP16402 RNU6-949P-201ENST00000384040 107 ntBASIC-1.64□□□□□ -2.67
HIST1H1DP16402 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.64□□□□□ -2.67
HIST1H1DP16402 RNU6-601P-201ENST00000384540 107 ntBASIC-1.64□□□□□ -2.67
HIST1H1DP16402 RNU2-9P-201ENST00000410194 145 ntBASIC-1.64□□□□□ -2.67
HIST1H1DP16402 AC074085.1-201ENST00000413598 418 ntBASIC-1.64□□□□□ -2.67
HIST1H1DP16402 CHEK2P4-201ENST00000450340 246 ntBASIC-1.64□□□□□ -2.67
HIST1H1DP16402 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.64□□□□□ -2.67
HIST1H1DP16402 RNU7-187P-201ENST00000458985 68 ntBASIC-1.64□□□□□ -2.67
HIST1H1DP16402 RPS29P24-201ENST00000486345 171 ntBASIC-1.64□□□□□ -2.67
HIST1H1DP16402 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.64□□□□□ -2.67
HIST1H1DP16402 RNU6-282P-201ENST00000365357 103 ntBASIC-1.65□□□□□ -2.67
HIST1H1DP16402 MIR626-201ENST00000385032 94 ntBASIC-1.65□□□□□ -2.67
HIST1H1DP16402 MIR147A-201ENST00000385079 72 ntBASIC-1.65□□□□□ -2.67
HIST1H1DP16402 AL606923.1-201ENST00000406616 190 ntBASIC-1.65□□□□□ -2.67
HIST1H1DP16402 MIR548I3-201ENST00000408378 149 ntBASIC-1.65□□□□□ -2.67
HIST1H1DP16402 RNU6-938P-201ENST00000411285 103 ntBASIC-1.65□□□□□ -2.67
HIST1H1DP16402 MTCYBP8-201ENST00000422855 651 ntBASIC-1.65□□□□□ -2.67
HIST1H1DP16402 AC073415.1-201ENST00000449240 153 ntBASIC-1.65□□□□□ -2.67
HIST1H1DP16402 snoU13.11-201ENST00000459219 104 ntBASIC-1.65□□□□□ -2.67
HIST1H1DP16402 MIR5704-201ENST00000584029 77 ntBASIC-1.65□□□□□ -2.67
HIST1H1DP16402 MIR6086-201ENST00000638065 55 ntBASIC-1.65□□□□□ -2.67
HIST1H1DP16402 RNU4-66P-201ENST00000365199 138 ntBASIC-1.66□□□□□ -2.68
HIST1H1DP16402 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.66□□□□□ -2.68
HIST1H1DP16402 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.66□□□□□ -2.68
HIST1H1DP16402 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.66□□□□□ -2.68
HIST1H1DP16402 RNU6-154P-201ENST00000384306 106 ntBASIC-1.66□□□□□ -2.68
HIST1H1DP16402 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.66□□□□□ -2.68
HIST1H1DP16402 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.66□□□□□ -2.68
HIST1H1DP16402 SNORA26.6-201ENST00000391256 115 ntBASIC-1.66□□□□□ -2.68
HIST1H1DP16402 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.66□□□□□ -2.68
HIST1H1DP16402 AC145423.2-201ENST00000610631 239 ntBASIC-1.66□□□□□ -2.68
HIST1H1DP16402 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.67□□□□□ -2.68
HIST1H1DP16402 SNORD115-2-201ENST00000362842 82 ntBASIC-1.67□□□□□ -2.68
HIST1H1DP16402 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.67□□□□□ -2.68
HIST1H1DP16402 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.67□□□□□ -2.68
HIST1H1DP16402 MIR548O-201ENST00000408583 114 ntBASIC-1.67□□□□□ -2.68
HIST1H1DP16402 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.67□□□□□ -2.68
HIST1H1DP16402 snoU13.19-201ENST00000459148 104 ntBASIC-1.67□□□□□ -2.68
HIST1H1DP16402 MIR3165-201ENST00000579874 75 ntBASIC-1.67□□□□□ -2.68
HIST1H1DP16402 YWHAEP2-201ENST00000580066 112 ntBASIC-1.67□□□□□ -2.68
HIST1H1DP16402 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.67□□□□□ -2.68
HIST1H1DP16402 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.68□□□□□ -2.68
HIST1H1DP16402 SNORD24-201ENST00000383884 75 ntBASIC-1.68□□□□□ -2.68
HIST1H1DP16402 SNORA27-201ENST00000384323 126 ntBASIC-1.68□□□□□ -2.68
HIST1H1DP16402 ACA59.1-201ENST00000515966 143 ntBASIC-1.68□□□□□ -2.68
HIST1H1DP16402 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.68□□□□□ -2.68
HIST1H1DP16402 MIR3920-201ENST00000581751 86 ntBASIC-1.68□□□□□ -2.68
HIST1H1DP16402 AC022441.3-201ENST00000605737 136 ntBASIC-1.68□□□□□ -2.68
HIST1H1DP16402 MIR6717-201ENST00000622747 73 ntBASIC-1.68□□□□□ -2.68
HIST1H1DP16402 RNY1P16-201ENST00000363063 111 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 RNU6-653P-201ENST00000363074 106 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 RNU4-58P-201ENST00000363192 141 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 RNU6-181P-201ENST00000363225 107 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 RNU6-996P-201ENST00000365438 107 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.69□□□□□ -2.68
HIST1H1DP16402 MTND3P21-201ENST00000433774 331 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 FCF1P4-201ENST00000448326 183 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 SNORA40.9-201ENST00000515895 93 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 RNU6-445P-201ENST00000516949 107 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 RNY1P9-201ENST00000532431 109 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 MIR2681-201ENST00000581814 105 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 AC245884.10-201ENST00000597355 337 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 AP001506.1-201ENST00000615444 211 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 AC069503.3-201ENST00000618674 145 ntBASIC-1.69□□□□□ -2.68
HIST1H1DP16402 RNA5SP192-201ENST00000364404 120 ntBASIC-1.7□□□□□ -2.68
HIST1H1DP16402 RNU6-831P-201ENST00000384548 107 ntBASIC-1.7□□□□□ -2.68
HIST1H1DP16402 SNORD77.3-201ENST00000391113 65 ntBASIC-1.7□□□□□ -2.68
HIST1H1DP16402 MIR1278-201ENST00000408753 81 ntBASIC-1.7□□□□□ -2.68
HIST1H1DP16402 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.7□□□□□ -2.68
HIST1H1DP16402 RNU7-63P-201ENST00000459054 62 ntBASIC-1.7□□□□□ -2.68
HIST1H1DP16402 RNU7-45P-201ENST00000459460 63 ntBASIC-1.7□□□□□ -2.68
HIST1H1DP16402 AL158211.2-201ENST00000607282 395 ntBASIC-1.7□□□□□ -2.68
HIST1H1DP16402 AC008536.2-201ENST00000607284 349 ntBASIC-1.7□□□□□ -2.68
HIST1H1DP16402 AP000240.1-201ENST00000609910 452 ntBASIC-1.7□□□□□ -2.68
HIST1H1DP16402 AC011603.4-201ENST00000611325 277 ntBASIC-1.7□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms