Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 MIR5002-201ENST00000584713 97 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 AC069114.2-201ENST00000604699 304 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 MIR376A2-201ENST00000636782 80 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 SNORD68-201ENST00000363214 84 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 SNORD116-21-201ENST00000384507 92 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 MIR518F-201ENST00000384973 87 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 MIR548A1-201ENST00000385041 97 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 MIRLET7F2-201ENST00000385277 83 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 SNORD77.3-201ENST00000391113 65 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 AC063976.4-201ENST00000421971 163 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 SNRPGP13-201ENST00000442212 177 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 AL021397.1-201ENST00000451806 248 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 RNU6-1149P-201ENST00000516810 97 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 AC078899.2-201ENST00000595282 212 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 AC025166.1-201ENST00000612411 163 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 AL121890.5-201ENST00000620848 304 ntBASIC2.2□□□□□ -2.06
ITGB1P05556 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.2□□□□□ -2.06
ITGB1P05556 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
ITGB1P05556 RNU6-755P-201ENST00000364400 103 ntBASIC2.19□□□□□ -2.06
ITGB1P05556 RNU6-1019P-201ENST00000364424 107 ntBASIC2.19□□□□□ -2.06
ITGB1P05556 RNU6-1292P-201ENST00000383856 107 ntBASIC2.19□□□□□ -2.06
ITGB1P05556 MIR676-201ENST00000390702 67 ntBASIC2.19□□□□□ -2.06
ITGB1P05556 AC019129.1-201ENST00000403786 261 ntBASIC2.19□□□□□ -2.06
ITGB1P05556 AC245047.3-201ENST00000429428 127 ntBASIC2.19□□□□□ -2.06
ITGB1P05556 FTH1P12-201ENST00000432137 551 ntBASIC2.19□□□□□ -2.06
ITGB1P05556 MTATP6P21-201ENST00000440681 189 ntBASIC2.19□□□□□ -2.06
ITGB1P05556 SNRPGP19-201ENST00000603826 189 ntBASIC2.19□□□□□ -2.06
ITGB1P05556 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.19□□□□□ -2.06
ITGB1P05556 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
ITGB1P05556 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
ITGB1P05556 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
ITGB1P05556 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.18□□□□□ -2.06
ITGB1P05556 RNU11-3P-201ENST00000391111 133 ntBASIC2.18□□□□□ -2.06
ITGB1P05556 SNORA40.18-201ENST00000391200 128 ntBASIC2.18□□□□□ -2.06
ITGB1P05556 MIR1263-201ENST00000408324 86 ntBASIC2.18□□□□□ -2.06
ITGB1P05556 SCARNA15-202ENST00000516881 127 ntBASIC2.18□□□□□ -2.06
ITGB1P05556 AC084364.2-201ENST00000546924 395 ntBASIC2.18□□□□□ -2.06
ITGB1P05556 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.18□□□□□ -2.06
ITGB1P05556 MTND5P18-201ENST00000445624 1801 ntBASIC2.18□□□□□ -2.06
ITGB1P05556 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ITGB1P05556 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
ITGB1P05556 ICE2P2-201ENST00000483823 2787 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 U8.5-201ENST00000364528 136 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 RNU6-147P-201ENST00000383983 107 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 RNU4-52P-201ENST00000384209 138 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ITGB1P05556 SNORA48.1-201ENST00000390879 135 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 RNA5SP109-201ENST00000391010 116 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 Y_RNA.649-201ENST00000459077 103 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 RNA5SP233-201ENST00000459153 113 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 RNA5SP182-201ENST00000516064 82 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 Y_RNA.714-201ENST00000517065 90 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 MIR5094-201ENST00000578766 85 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 MIR3613-201ENST00000579844 87 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 MIR4762-201ENST00000585261 75 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 AC087685.1-201ENST00000587507 141 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 AC002984.1-201ENST00000591692 448 ntBASIC2.17□□□□□ -2.06
ITGB1P05556 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.17□□□□□ -2.06
ITGB1P05556 RNU6-1298P-201ENST00000362456 101 ntBASIC2.16□□□□□ -2.06
ITGB1P05556 Y_RNA.346-201ENST00000365385 112 ntBASIC2.16□□□□□ -2.06
ITGB1P05556 MIR802-201ENST00000390235 94 ntBASIC2.16□□□□□ -2.06
ITGB1P05556 MIR548O-201ENST00000408583 114 ntBASIC2.16□□□□□ -2.06
ITGB1P05556 AC069257.2-201ENST00000441819 155 ntBASIC2.16□□□□□ -2.06
ITGB1P05556 AC104435.1-201ENST00000483483 166 ntBASIC2.16□□□□□ -2.06
ITGB1P05556 RNU7-25P-201ENST00000516544 62 ntBASIC2.16□□□□□ -2.06
ITGB1P05556 MIR4498-201ENST00000577599 66 ntBASIC2.16□□□□□ -2.06
ITGB1P05556 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
ITGB1P05556 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ITGB1P05556 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
ITGB1P05556 RNU6-1084P-201ENST00000362498 107 ntBASIC2.15□□□□□ -2.07
ITGB1P05556 SNORA63D-201ENST00000364359 132 ntBASIC2.15□□□□□ -2.07
ITGB1P05556 Y_RNA.366-201ENST00000365540 102 ntBASIC2.15□□□□□ -2.07
ITGB1P05556 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
ITGB1P05556 SNORA17.3-201ENST00000391159 129 ntBASIC2.15□□□□□ -2.07
ITGB1P05556 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.15□□□□□ -2.07
ITGB1P05556 AC108667.1-201ENST00000428618 249 ntBASIC2.15□□□□□ -2.07
ITGB1P05556 CALM2P4-201ENST00000430810 426 ntBASIC2.15□□□□□ -2.07
ITGB1P05556 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.15□□□□□ -2.07
ITGB1P05556 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.15□□□□□ -2.07
ITGB1P05556 RNVU1-2-201ENST00000516326 135 ntBASIC2.15□□□□□ -2.07
ITGB1P05556 MIR5197-201ENST00000583721 112 ntBASIC2.15□□□□□ -2.07
ITGB1P05556 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ITGB1P05556 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ITGB1P05556 SNORD14E-201ENST00000364009 85 ntBASIC2.14□□□□□ -2.07
ITGB1P05556 RNA5SP482-201ENST00000391269 118 ntBASIC2.14□□□□□ -2.07
ITGB1P05556 AC108729.3-201ENST00000513484 108 ntBASIC2.14□□□□□ -2.07
ITGB1P05556 SNORA31.25-201ENST00000517242 134 ntBASIC2.14□□□□□ -2.07
ITGB1P05556 RNU2-19P-201ENST00000517288 84 ntBASIC2.14□□□□□ -2.07
ITGB1P05556 SUB1P4-201ENST00000566062 339 ntBASIC2.14□□□□□ -2.07
ITGB1P05556 MIR5089-201ENST00000580047 84 ntBASIC2.14□□□□□ -2.07
ITGB1P05556 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.14□□□□□ -2.07
ITGB1P05556 MIR8054-201ENST00000620877 86 ntBASIC2.14□□□□□ -2.07
ITGB1P05556 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ITGB1P05556 AC008555.8-201ENST00000623602 2168 ntBASIC2.13□□□□□ -2.07
ITGB1P05556 RNU6-268P-201ENST00000364174 107 ntBASIC2.13□□□□□ -2.07
ITGB1P05556 RNU6-442P-201ENST00000383968 104 ntBASIC2.13□□□□□ -2.07
ITGB1P05556 RNU6-880P-201ENST00000384526 107 ntBASIC2.13□□□□□ -2.07
ITGB1P05556 Y_RNA.528-201ENST00000384575 108 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 321.5 ms