Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MIR4529-201ENST00000578110 78 ntBASIC2.33□□□□□ -2.04
CHGBP05060 AC069114.2-201ENST00000604699 304 ntBASIC2.33□□□□□ -2.04
CHGBP05060 MIR8054-201ENST00000620877 86 ntBASIC2.33□□□□□ -2.04
CHGBP05060 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHGBP05060 Y_RNA.35-201ENST00000362601 101 ntBASIC2.32□□□□□ -2.04
CHGBP05060 RNU6-163P-201ENST00000384396 106 ntBASIC2.32□□□□□ -2.04
CHGBP05060 Y_RNA.547-201ENST00000384654 119 ntBASIC2.32□□□□□ -2.04
CHGBP05060 Y_RNA.649-201ENST00000459077 103 ntBASIC2.32□□□□□ -2.04
CHGBP05060 AC025033.1-201ENST00000463883 194 ntBASIC2.32□□□□□ -2.04
CHGBP05060 AC079804.2-201ENST00000490376 200 ntBASIC2.32□□□□□ -2.04
CHGBP05060 AC114811.1-201ENST00000507207 168 ntBASIC2.32□□□□□ -2.04
CHGBP05060 RNA5SP236-201ENST00000516169 116 ntBASIC2.32□□□□□ -2.04
CHGBP05060 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.32□□□□□ -2.04
CHGBP05060 AC005786.1-201ENST00000588553 154 ntBASIC2.32□□□□□ -2.04
CHGBP05060 AC002984.1-201ENST00000591692 448 ntBASIC2.32□□□□□ -2.04
CHGBP05060 MIR6845-201ENST00000613182 61 ntBASIC2.32□□□□□ -2.04
CHGBP05060 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.32□□□□□ -2.04
CHGBP05060 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHGBP05060 MTND5P18-201ENST00000445624 1801 ntBASIC2.31□□□□□ -2.04
CHGBP05060 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHGBP05060 Y_RNA.366-201ENST00000365540 102 ntBASIC2.31□□□□□ -2.04
CHGBP05060 RNU6-1189P-201ENST00000383958 107 ntBASIC2.31□□□□□ -2.04
CHGBP05060 RNU4-52P-201ENST00000384209 138 ntBASIC2.31□□□□□ -2.04
CHGBP05060 MIR29C-201ENST00000385231 88 ntBASIC2.31□□□□□ -2.04
CHGBP05060 HSPE1P9-201ENST00000440046 311 ntBASIC2.31□□□□□ -2.04
CHGBP05060 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.31□□□□□ -2.04
CHGBP05060 AC090255.1-201ENST00000495779 349 ntBASIC2.31□□□□□ -2.04
CHGBP05060 SNORD36C-201ENST00000516733 66 ntBASIC2.31□□□□□ -2.04
CHGBP05060 AC134878.1-201ENST00000619901 243 ntBASIC2.31□□□□□ -2.04
CHGBP05060 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CHGBP05060 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
CHGBP05060 SNORD115-28-201ENST00000363931 81 ntBASIC2.3□□□□□ -2.04
CHGBP05060 Y_RNA.346-201ENST00000365385 112 ntBASIC2.3□□□□□ -2.04
CHGBP05060 MIR9-3-201ENST00000385084 90 ntBASIC2.3□□□□□ -2.04
CHGBP05060 SNORA40.18-201ENST00000391200 128 ntBASIC2.3□□□□□ -2.04
CHGBP05060 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.3□□□□□ -2.04
CHGBP05060 RNU6-240P-201ENST00000516098 97 ntBASIC2.3□□□□□ -2.04
CHGBP05060 RNU6-589P-201ENST00000516485 107 ntBASIC2.3□□□□□ -2.04
CHGBP05060 SCARNA15-202ENST00000516881 127 ntBASIC2.3□□□□□ -2.04
CHGBP05060 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CHGBP05060 MIR5197-201ENST00000583721 112 ntBASIC2.3□□□□□ -2.04
CHGBP05060 MIR4762-201ENST00000585261 75 ntBASIC2.3□□□□□ -2.04
CHGBP05060 MIR6840-201ENST00000611937 71 ntBASIC2.3□□□□□ -2.04
CHGBP05060 MIR342-201ENST00000362212 99 ntBASIC2.29□□□□□ -2.04
CHGBP05060 Y_RNA.37-201ENST00000362606 108 ntBASIC2.29□□□□□ -2.04
CHGBP05060 RNU6-1019P-201ENST00000364424 107 ntBASIC2.29□□□□□ -2.04
CHGBP05060 U8.5-201ENST00000364528 136 ntBASIC2.29□□□□□ -2.04
CHGBP05060 RNA5SP138-201ENST00000365098 114 ntBASIC2.29□□□□□ -2.04
CHGBP05060 SNORA4.2-201ENST00000365313 147 ntBASIC2.29□□□□□ -2.04
CHGBP05060 Y_RNA.528-201ENST00000384575 108 ntBASIC2.29□□□□□ -2.04
CHGBP05060 MIR518A2-201ENST00000384966 87 ntBASIC2.29□□□□□ -2.04
CHGBP05060 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.29□□□□□ -2.04
CHGBP05060 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.29□□□□□ -2.04
CHGBP05060 SNORA31.10-201ENST00000516482 106 ntBASIC2.29□□□□□ -2.04
CHGBP05060 RNU7-70P-201ENST00000516941 66 ntBASIC2.29□□□□□ -2.04
CHGBP05060 AC006441.5-201ENST00000612680 209 ntBASIC2.29□□□□□ -2.04
CHGBP05060 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.29□□□□□ -2.04
CHGBP05060 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CHGBP05060 SNX2P2-201ENST00000424553 323 ntBASIC2.28□□□□□ -2.04
CHGBP05060 CALM2P4-201ENST00000430810 426 ntBASIC2.28□□□□□ -2.04
CHGBP05060 RPL23AP63-201ENST00000498752 471 ntBASIC2.28□□□□□ -2.04
CHGBP05060 CYCTP-201ENST00000504253 315 ntBASIC2.28□□□□□ -2.04
CHGBP05060 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.28□□□□□ -2.04
CHGBP05060 SNORA18.7-201ENST00000516910 131 ntBASIC2.28□□□□□ -2.04
CHGBP05060 AL137067.1-201ENST00000615933 120 ntBASIC2.28□□□□□ -2.04
CHGBP05060 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.28□□□□□ -2.04
CHGBP05060 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
CHGBP05060 AP000648.3-201ENST00000623539 4507 ntBASIC2.27□□□□□ -2.05
CHGBP05060 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHGBP05060 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
CHGBP05060 RNU6-690P-201ENST00000365242 106 ntBASIC2.27□□□□□ -2.05
CHGBP05060 RNU2-7P-201ENST00000410794 178 ntBASIC2.27□□□□□ -2.05
CHGBP05060 RNA5SP450-201ENST00000411206 102 ntBASIC2.27□□□□□ -2.05
CHGBP05060 SNRPGP14-201ENST00000435400 219 ntBASIC2.27□□□□□ -2.05
CHGBP05060 RNVU1-2-201ENST00000516326 135 ntBASIC2.27□□□□□ -2.05
CHGBP05060 RNU7-28P-201ENST00000516759 62 ntBASIC2.27□□□□□ -2.05
CHGBP05060 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.27□□□□□ -2.05
CHGBP05060 AC008555.8-201ENST00000623602 2168 ntBASIC2.27□□□□□ -2.05
CHGBP05060 Y_RNA.336-201ENST00000365307 109 ntBASIC2.26□□□□□ -2.05
CHGBP05060 Y_RNA.410-201ENST00000383992 113 ntBASIC2.26□□□□□ -2.05
CHGBP05060 SNORA28-201ENST00000606769 126 ntBASIC2.26□□□□□ -2.05
CHGBP05060 MIR8081-201ENST00000611533 95 ntBASIC2.26□□□□□ -2.05
CHGBP05060 MIR6715A-201ENST00000615929 79 ntBASIC2.26□□□□□ -2.05
CHGBP05060 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.26□□□□□ -2.05
CHGBP05060 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.26□□□□□ -2.05
CHGBP05060 SNORD38C-201ENST00000384381 69 ntBASIC2.25□□□□□ -2.05
CHGBP05060 MIR17-201ENST00000385012 84 ntBASIC2.25□□□□□ -2.05
CHGBP05060 MIRLET7F2-201ENST00000385277 83 ntBASIC2.25□□□□□ -2.05
CHGBP05060 U8.16-201ENST00000391279 133 ntBASIC2.25□□□□□ -2.05
CHGBP05060 MIR1283-2-201ENST00000408621 87 ntBASIC2.25□□□□□ -2.05
CHGBP05060 RNU6-938P-201ENST00000411285 103 ntBASIC2.25□□□□□ -2.05
CHGBP05060 AL356379.1-201ENST00000414105 126 ntBASIC2.25□□□□□ -2.05
CHGBP05060 HMGN2P38-201ENST00000423806 265 ntBASIC2.25□□□□□ -2.05
CHGBP05060 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.25□□□□□ -2.05
CHGBP05060 HMGN2P32-201ENST00000444648 269 ntBASIC2.25□□□□□ -2.05
CHGBP05060 AP003484.1-201ENST00000530974 250 ntBASIC2.25□□□□□ -2.05
CHGBP05060 AL596211.1-201ENST00000569873 2277 ntBASIC2.25□□□□□ -2.05
CHGBP05060 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CHGBP05060 Y_RNA.351-201ENST00000365436 96 ntBASIC2.24□□□□□ -2.05
CHGBP05060 RNU6-880P-201ENST00000384526 107 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms