Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SNORA31.4-201ENST00000516049 129 ntBASIC1.01□□□□□ -2.25
MT-ND1P03886 RNU6-1023P-201ENST00000516137 106 ntBASIC1.01□□□□□ -2.25
MT-ND1P03886 RNU6-561P-201ENST00000516222 102 ntBASIC1.01□□□□□ -2.25
MT-ND1P03886 RNU6-830P-201ENST00000516353 107 ntBASIC1.01□□□□□ -2.25
MT-ND1P03886 RNU7-25P-201ENST00000516544 62 ntBASIC1.01□□□□□ -2.25
MT-ND1P03886 AC007751.1-201ENST00000529260 376 ntBASIC1.01□□□□□ -2.25
MT-ND1P03886 AL157834.3-201ENST00000615543 103 ntBASIC1.01□□□□□ -2.25
MT-ND1P03886 RNU6-484P-201ENST00000384016 107 ntBASIC1□□□□□ -2.25
MT-ND1P03886 SNORD38C-201ENST00000384381 69 ntBASIC1□□□□□ -2.25
MT-ND1P03886 Y_RNA.547-201ENST00000384654 119 ntBASIC1□□□□□ -2.25
MT-ND1P03886 MIR802-201ENST00000390235 94 ntBASIC1□□□□□ -2.25
MT-ND1P03886 AP1B1P2-201ENST00000416196 106 ntBASIC1□□□□□ -2.25
MT-ND1P03886 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1□□□□□ -2.25
MT-ND1P03886 AC023449.1-201ENST00000454464 154 ntBASIC1□□□□□ -2.25
MT-ND1P03886 RNU4-57P-201ENST00000515980 135 ntBASIC1□□□□□ -2.25
MT-ND1P03886 SNORD111.1-201ENST00000516421 86 ntBASIC1□□□□□ -2.25
MT-ND1P03886 RNU7-181P-201ENST00000517234 74 ntBASIC1□□□□□ -2.25
MT-ND1P03886 AC004817.2-201ENST00000561794 651 ntBASIC1□□□□□ -2.25
MT-ND1P03886 MIR4764-201ENST00000580680 88 ntBASIC1□□□□□ -2.25
MT-ND1P03886 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
MT-ND1P03886 Y_RNA.91-201ENST00000363042 107 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 Y_RNA.262-201ENST00000364641 102 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 Y_RNA.308-201ENST00000365043 101 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 Y_RNA.478-201ENST00000384358 107 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 MIR570-201ENST00000384917 97 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 MIR520C-201ENST00000385005 87 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 MIR616-201ENST00000385293 97 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 U8.17-201ENST00000391292 132 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 AL606845.1-201ENST00000404881 255 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 Y_RNA.622-201ENST00000411091 108 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 Y_RNA.626-201ENST00000411288 95 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 BTF3P4-201ENST00000418852 495 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 MRPL35P3-201ENST00000421557 364 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.99□□□□□ -2.25
MT-ND1P03886 SNORA31.2-201ENST00000516019 134 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 MIR4308-201ENST00000580634 81 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 AL357312.1-201ENST00000603879 298 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 AC012676.2-201ENST00000619258 186 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 AC015726.2-201ENST00000620112 122 ntBASIC0.99□□□□□ -2.25
MT-ND1P03886 SNORA20.1-201ENST00000364790 130 ntBASIC0.98□□□□□ -2.25
MT-ND1P03886 SNORD61-201ENST00000384252 73 ntBASIC0.98□□□□□ -2.25
MT-ND1P03886 Y_RNA.494-201ENST00000384432 111 ntBASIC0.98□□□□□ -2.25
MT-ND1P03886 MIR548A2-201ENST00000384956 97 ntBASIC0.98□□□□□ -2.25
MT-ND1P03886 RNU6-493P-201ENST00000391321 108 ntBASIC0.98□□□□□ -2.25
MT-ND1P03886 MIR548O-201ENST00000408583 114 ntBASIC0.98□□□□□ -2.25
MT-ND1P03886 AC245047.7-201ENST00000440265 293 ntBASIC0.98□□□□□ -2.25
MT-ND1P03886 COX6CP14-201ENST00000469580 174 ntBASIC0.98□□□□□ -2.25
MT-ND1P03886 RPS26P48-201ENST00000491713 339 ntBASIC0.98□□□□□ -2.25
MT-ND1P03886 RNU6-1007P-201ENST00000516586 107 ntBASIC0.98□□□□□ -2.25
MT-ND1P03886 AL391516.1-201ENST00000554380 2449 ntBASIC0.98□□□□□ -2.25
MT-ND1P03886 Y_RNA.66-201ENST00000362862 102 ntBASIC0.97□□□□□ -2.25
MT-ND1P03886 RNY1-201ENST00000364228 113 ntBASIC0.97□□□□□ -2.25
MT-ND1P03886 RNU6-923P-201ENST00000364753 107 ntBASIC0.97□□□□□ -2.25
MT-ND1P03886 RNU4-17P-201ENST00000365598 141 ntBASIC0.97□□□□□ -2.25
MT-ND1P03886 RNU6-1228P-201ENST00000391014 107 ntBASIC0.97□□□□□ -2.25
MT-ND1P03886 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.97□□□□□ -2.25
MT-ND1P03886 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.97□□□□□ -2.25
MT-ND1P03886 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.97□□□□□ -2.25
MT-ND1P03886 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
MT-ND1P03886 AP003716.2-201ENST00000528260 108 ntBASIC0.97□□□□□ -2.25
MT-ND1P03886 PRELID3BP2-201ENST00000605362 201 ntBASIC0.97□□□□□ -2.25
MT-ND1P03886 AL391903.3-201ENST00000612158 163 ntBASIC0.97□□□□□ -2.25
MT-ND1P03886 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
MT-ND1P03886 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.97□□□□□ -2.25
MT-ND1P03886 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
MT-ND1P03886 MIR378A-201ENST00000362177 66 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 SNORA25.3-201ENST00000363205 127 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 SNORD45.3-201ENST00000363836 72 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 RNA5SP99-201ENST00000364020 114 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 Y_RNA.634-201ENST00000364811 113 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 MIR19B1-201ENST00000384829 87 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 MIR518F-201ENST00000384973 87 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 MIR15B-201ENST00000385045 98 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 RNU6-910P-201ENST00000390844 107 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 SNORD12-201ENST00000391002 90 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 RNU6-938P-201ENST00000411285 103 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 RNU4-71P-201ENST00000516258 113 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 RNU7-43P-201ENST00000516554 64 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 RNU2-4P-201ENST00000606190 192 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 MIR6078-201ENST00000611069 100 ntBASIC0.96□□□□□ -2.26
MT-ND1P03886 RNY3P5-201ENST00000384127 102 ntBASIC0.95□□□□□ -2.26
MT-ND1P03886 MIR1302-7-201ENST00000408841 72 ntBASIC0.95□□□□□ -2.26
MT-ND1P03886 RNU2-55P-201ENST00000411146 174 ntBASIC0.95□□□□□ -2.26
MT-ND1P03886 RPL39P39-201ENST00000455840 151 ntBASIC0.95□□□□□ -2.26
MT-ND1P03886 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.95□□□□□ -2.26
MT-ND1P03886 RNU2-13P-201ENST00000515909 113 ntBASIC0.95□□□□□ -2.26
MT-ND1P03886 RNU6-693P-201ENST00000516134 107 ntBASIC0.95□□□□□ -2.26
MT-ND1P03886 RNU6-1299P-201ENST00000516316 100 ntBASIC0.95□□□□□ -2.26
MT-ND1P03886 RNU6-1270P-201ENST00000517128 108 ntBASIC0.95□□□□□ -2.26
MT-ND1P03886 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.95□□□□□ -2.26
MT-ND1P03886 MIR4662B-201ENST00000579498 81 ntBASIC0.95□□□□□ -2.26
MT-ND1P03886 RNU6-379P-201ENST00000363813 104 ntBASIC0.94□□□□□ -2.26
MT-ND1P03886 Y_RNA.199-201ENST00000364014 102 ntBASIC0.94□□□□□ -2.26
MT-ND1P03886 Y_RNA.242-201ENST00000364473 110 ntBASIC0.94□□□□□ -2.26
MT-ND1P03886 SNORD24-201ENST00000383884 75 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms