Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 AC064859.1-201ENST00000624741 174 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 AC091304.10-201ENST00000641554 121 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 Y_RNA.190-201ENST00000363964 101 ntBASIC2.46□□□□□ -2.02
TRIM13O60858 Y_RNA.336-201ENST00000365307 109 ntBASIC2.46□□□□□ -2.02
TRIM13O60858 SNORA9-201ENST00000384215 133 ntBASIC2.46□□□□□ -2.02
TRIM13O60858 RNU6-24P-201ENST00000384440 107 ntBASIC2.46□□□□□ -2.02
TRIM13O60858 RN7SKP200-201ENST00000410564 320 ntBASIC2.46□□□□□ -2.02
TRIM13O60858 RNU2-11P-201ENST00000459191 187 ntBASIC2.46□□□□□ -2.02
TRIM13O60858 RNU1-142P-201ENST00000516682 145 ntBASIC2.46□□□□□ -2.02
TRIM13O60858 RNU6-267P-201ENST00000516714 103 ntBASIC2.46□□□□□ -2.02
TRIM13O60858 RNA5SP402-201ENST00000517148 110 ntBASIC2.46□□□□□ -2.02
TRIM13O60858 AC004812.1-201ENST00000540773 146 ntBASIC2.46□□□□□ -2.02
TRIM13O60858 AC019288.1-201ENST00000557918 224 ntBASIC2.46□□□□□ -2.02
TRIM13O60858 AL513534.2-201ENST00000603836 250 ntBASIC2.46□□□□□ -2.02
TRIM13O60858 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TRIM13O60858 RNU6-1084P-201ENST00000362498 107 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 RNA5SP387-201ENST00000364226 106 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 SNORD45B-201ENST00000364617 72 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 Y_RNA.377-201ENST00000365644 108 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 RNU1-138P-201ENST00000384093 164 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 Y_RNA.437-201ENST00000384113 113 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 SNORA18-201ENST00000384416 132 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 AL512326.2-201ENST00000426359 151 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 AL035398.1-201ENST00000430869 322 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 AC107083.1-201ENST00000439643 279 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 AL109933.2-201ENST00000452651 260 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 RNU7-94P-201ENST00000459576 63 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 SNORA31.4-201ENST00000516049 129 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 RNU6-1041P-201ENST00000516254 102 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 SNORD45.4-201ENST00000516629 73 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 AL137847.3-201ENST00000611521 109 ntBASIC2.45□□□□□ -2.02
TRIM13O60858 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
TRIM13O60858 Y_RNA.95-201ENST00000363079 95 ntBASIC2.44□□□□□ -2.02
TRIM13O60858 Y_RNA.99-201ENST00000363138 105 ntBASIC2.44□□□□□ -2.02
TRIM13O60858 RNU6-679P-201ENST00000391003 106 ntBASIC2.44□□□□□ -2.02
TRIM13O60858 AL022718.1-201ENST00000412004 84 ntBASIC2.44□□□□□ -2.02
TRIM13O60858 SNX2P2-201ENST00000424553 323 ntBASIC2.44□□□□□ -2.02
TRIM13O60858 Y_RNA.705-201ENST00000516862 110 ntBASIC2.44□□□□□ -2.02
TRIM13O60858 AC007179.3-201ENST00000604976 235 ntBASIC2.44□□□□□ -2.02
TRIM13O60858 FO624990.1-201ENST00000636373 85 ntBASIC2.44□□□□□ -2.02
TRIM13O60858 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
TRIM13O60858 AC073346.2-201ENST00000624724 2058 ntBASIC2.43□□□□□ -2.02
TRIM13O60858 SNORA80E-201ENST00000384744 137 ntBASIC2.43□□□□□ -2.02
TRIM13O60858 RNU6-887P-201ENST00000410660 100 ntBASIC2.43□□□□□ -2.02
TRIM13O60858 Y_RNA.620-201ENST00000411009 88 ntBASIC2.43□□□□□ -2.02
TRIM13O60858 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM13O60858 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM13O60858 MIR342-201ENST00000362212 99 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 SNORD46.1-201ENST00000364139 104 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 Y_RNA.299-201ENST00000364973 94 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 Y_RNA.426-201ENST00000384068 113 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 RNU6-1201P-201ENST00000384227 107 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 SNORA8-201ENST00000384574 139 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 RNA5SP323-201ENST00000391094 133 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 POLR2J4-204ENST00000418424 324 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 AC073261.1-201ENST00000429409 121 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 AC105272.1-201ENST00000438604 198 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 RNU6-998P-201ENST00000515894 101 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 AC024995.1-201ENST00000523014 93 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 MIR4668-201ENST00000582284 70 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 MIR5195-201ENST00000583555 115 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 AC021613.1-201ENST00000623880 111 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 CTSLP2-204ENST00000629029 392 ntBASIC2.42□□□□□ -2.02
TRIM13O60858 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.42□□□□□ -2.02
TRIM13O60858 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM13O60858 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TRIM13O60858 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
TRIM13O60858 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM13O60858 MIR21-201ENST00000362134 72 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 RNU6-859P-201ENST00000362728 107 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 Y_RNA.467-201ENST00000384297 102 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 SNORA27-201ENST00000384323 126 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 MIR515-2-201ENST00000384883 83 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 MIR515-1-201ENST00000384884 83 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 SNORA7.5-201ENST00000410672 110 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 RNU4-69P-201ENST00000410677 143 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.41□□□□□ -2.02
TRIM13O60858 RNU7-96P-201ENST00000459535 64 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 AC139453.2-201ENST00000487255 133 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 AC026271.5-201ENST00000577873 130 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 MIR4446-201ENST00000578505 67 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 U4.3-201ENST00000621047 82 ntBASIC2.41□□□□□ -2.02
TRIM13O60858 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.41□□□□□ -2.02
TRIM13O60858 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.41□□□□□ -2.02
TRIM13O60858 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM13O60858 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.4□□□□□ -2.02
TRIM13O60858 MIR208A-201ENST00000362287 71 ntBASIC2.4□□□□□ -2.03
TRIM13O60858 SNORA67.1-201ENST00000364749 141 ntBASIC2.4□□□□□ -2.03
TRIM13O60858 RNU6-160P-201ENST00000384591 107 ntBASIC2.4□□□□□ -2.03
TRIM13O60858 MIR27B-201ENST00000385129 97 ntBASIC2.4□□□□□ -2.03
TRIM13O60858 RNU2-40P-201ENST00000410833 196 ntBASIC2.4□□□□□ -2.03
TRIM13O60858 AL513328.1-201ENST00000446460 224 ntBASIC2.4□□□□□ -2.03
TRIM13O60858 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.4□□□□□ -2.03
TRIM13O60858 RNU7-26P-201ENST00000458980 63 ntBASIC2.4□□□□□ -2.03
TRIM13O60858 AL163195.1-201ENST00000496941 348 ntBASIC2.4□□□□□ -2.03
TRIM13O60858 RPL23AP63-201ENST00000498752 471 ntBASIC2.4□□□□□ -2.03
TRIM13O60858 Y_RNA.659-201ENST00000515994 113 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 258.3 ms