Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU7-121P-201ENST00000516604 62 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 AC084364.2-201ENST00000546924 395 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 MIR3169-201ENST00000578032 83 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 MIR338-201ENST00000636369 67 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 U6.108-201ENST00000637764 58 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 Y_RNA.253-201ENST00000364562 112 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 RNU6-442P-201ENST00000383968 104 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 RNU6-1168P-201ENST00000390831 104 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 SNORA12.1-201ENST00000390873 148 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 Y_RNA.584-201ENST00000391090 114 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 AC244636.1-201ENST00000421152 228 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 SNORA18.4-201ENST00000516440 124 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 SNORD116-25-201ENST00000516517 92 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 RNU6-126P-201ENST00000516685 103 ntBASIC1.48□□□□□ -2.17
CACNA1FO60840 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
CACNA1FO60840 Y_RNA.99-201ENST00000363138 105 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 RNU4-11P-201ENST00000365287 132 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 RNU4-43P-201ENST00000410628 137 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 Y_RNA.622-201ENST00000411091 108 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.47□□□□□ -2.17
CACNA1FO60840 RNU1-131P-201ENST00000458943 161 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.47□□□□□ -2.17
CACNA1FO60840 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.47□□□□□ -2.17
CACNA1FO60840 AL358944.1-201ENST00000528537 144 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 MIR4299-201ENST00000577899 72 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 MIR8054-201ENST00000620877 86 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CACNA1FO60840 AC010332.2-201ENST00000613083 1904 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 Y_RNA.66-201ENST00000362862 102 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 Y_RNA.218-201ENST00000364218 104 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 RNU6-1117P-201ENST00000384525 104 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 MIR548A2-201ENST00000384956 97 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CACNA1FO60840 RPS29P28-201ENST00000446439 141 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 HMGN1P7-201ENST00000491722 313 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 RNU6-62P-201ENST00000516526 102 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 RNU6-341P-201ENST00000516973 96 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 AC024995.1-201ENST00000523014 93 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 AP002004.2-201ENST00000531656 154 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 AL365205.2-201ENST00000594586 68 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 AC069114.2-201ENST00000604699 304 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 AL591926.4-201ENST00000616895 298 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 MIR6767-201ENST00000637302 66 ntBASIC1.47□□□□□ -2.17
CACNA1FO60840 RNU4-38P-201ENST00000364472 129 ntBASIC1.46□□□□□ -2.18
CACNA1FO60840 RNU6-460P-201ENST00000391158 108 ntBASIC1.46□□□□□ -2.18
CACNA1FO60840 Y_RNA.629-201ENST00000411368 105 ntBASIC1.46□□□□□ -2.18
CACNA1FO60840 RNU6-365P-201ENST00000517113 106 ntBASIC1.46□□□□□ -2.18
CACNA1FO60840 MIR5094-201ENST00000578766 85 ntBASIC1.46□□□□□ -2.18
CACNA1FO60840 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.46□□□□□ -2.18
CACNA1FO60840 AC245060.5-201ENST00000610778 3293 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 Y_RNA.91-201ENST00000363042 107 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 Y_RNA.420-201ENST00000384043 110 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 Y_RNA.568-201ENST00000384742 113 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 MIR515-2-201ENST00000384883 83 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 MIR515-1-201ENST00000384884 83 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.45□□□□□ -2.18
CACNA1FO60840 OR9P1P-201ENST00000496431 281 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 SNORA44.1-201ENST00000517031 108 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.45□□□□□ -2.18
CACNA1FO60840 MIR548X2-201ENST00000579776 100 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 AC120024.3-201ENST00000603167 156 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CACNA1FO60840 Y_RNA.215-201ENST00000364204 112 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 Y_RNA.337-201ENST00000365312 102 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 SNORA22C-201ENST00000384614 134 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 SNORA20-201ENST00000384662 132 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 MIR518A2-201ENST00000384966 87 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 SNORA40-201ENST00000388090 126 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 RNU6-257P-201ENST00000410238 98 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 MTND4LP9-201ENST00000427694 174 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.45□□□□□ -2.18
CACNA1FO60840 AC233266.1-201ENST00000454518 96 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 RNU6-1096P-201ENST00000517089 102 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 AC242852.1-201ENST00000612151 96 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 AC244015.1-201ENST00000622301 99 ntBASIC1.45□□□□□ -2.18
CACNA1FO60840 AL157777.2-201ENST00000258070 137 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 Y_RNA.242-201ENST00000364473 110 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 snoU2-30.1-201ENST00000365012 70 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 Y_RNA.354-201ENST00000365448 111 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 RNU6-1336P-201ENST00000383886 109 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 SNORA26-201ENST00000391286 122 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 AL117342.1-201ENST00000404861 406 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 MIR1283-2-201ENST00000408621 87 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 SNORD77.4-201ENST00000516158 81 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 RNU6-1270P-201ENST00000517128 108 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 MIR548AI-201ENST00000579940 88 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 AC131055.1-201ENST00000584626 316 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 AC091895.1-201ENST00000624494 256 ntBASIC1.44□□□□□ -2.18
CACNA1FO60840 Y_RNA.265-201ENST00000364677 108 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 SNORD38C-201ENST00000384381 69 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 RNU6-1154P-201ENST00000391001 104 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 RNU2-70P-201ENST00000410718 179 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 AC006461.1-201ENST00000412637 326 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 AC022202.1-201ENST00000613515 211 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 AC022513.1-201ENST00000624512 117 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 Y_RNA.71-201ENST00000362892 104 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 RNU6-23P-201ENST00000363283 107 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 RNU6-1209P-201ENST00000363655 107 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms