Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MIR516B2-201ENST00000385190 85 ntBASIC1.75□□□□□ -2.13
PRPF3O43395 Y_RNA.793-201ENST00000411222 111 ntBASIC1.75□□□□□ -2.13
PRPF3O43395 RPS27P16-201ENST00000425758 201 ntBASIC1.75□□□□□ -2.13
PRPF3O43395 Y_RNA.797-201ENST00000515977 94 ntBASIC1.75□□□□□ -2.13
PRPF3O43395 RNU7-43P-201ENST00000516554 64 ntBASIC1.75□□□□□ -2.13
PRPF3O43395 AC090142.3-201ENST00000519012 385 ntBASIC1.75□□□□□ -2.13
PRPF3O43395 AL160236.1-201ENST00000556317 195 ntBASIC1.75□□□□□ -2.13
PRPF3O43395 MIR7111-201ENST00000619751 72 ntBASIC1.75□□□□□ -2.13
PRPF3O43395 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PRPF3O43395 Y_RNA.182-201ENST00000363880 111 ntBASIC1.74□□□□□ -2.13
PRPF3O43395 RNU6-728P-201ENST00000365375 104 ntBASIC1.74□□□□□ -2.13
PRPF3O43395 Y_RNA.432-201ENST00000384087 111 ntBASIC1.74□□□□□ -2.13
PRPF3O43395 Y_RNA.435-201ENST00000384095 112 ntBASIC1.74□□□□□ -2.13
PRPF3O43395 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PRPF3O43395 RNU6-578P-201ENST00000390980 103 ntBASIC1.74□□□□□ -2.13
PRPF3O43395 MIR1304-201ENST00000408243 91 ntBASIC1.74□□□□□ -2.13
PRPF3O43395 RNU6-321P-201ENST00000410912 106 ntBASIC1.74□□□□□ -2.13
PRPF3O43395 SNRPGP8-201ENST00000454064 226 ntBASIC1.74□□□□□ -2.13
PRPF3O43395 RNA5SP153-201ENST00000516498 76 ntBASIC1.74□□□□□ -2.13
PRPF3O43395 Y_RNA.700-201ENST00000516806 100 ntBASIC1.74□□□□□ -2.13
PRPF3O43395 SNORD53B-201ENST00000577887 78 ntBASIC1.74□□□□□ -2.13
PRPF3O43395 AC108706.1-201ENST00000611053 297 ntBASIC1.74□□□□□ -2.13
PRPF3O43395 SNORD45.3-201ENST00000363836 72 ntBASIC1.73□□□□□ -2.13
PRPF3O43395 SNORA1.2-201ENST00000365189 134 ntBASIC1.73□□□□□ -2.13
PRPF3O43395 RNU6-484P-201ENST00000384016 107 ntBASIC1.73□□□□□ -2.13
PRPF3O43395 MIR499A-201ENST00000384903 122 ntBASIC1.73□□□□□ -2.13
PRPF3O43395 SNORA17.3-201ENST00000391159 129 ntBASIC1.73□□□□□ -2.13
PRPF3O43395 AL121914.1-201ENST00000450188 156 ntBASIC1.73□□□□□ -2.13
PRPF3O43395 RNU6-561P-201ENST00000516222 102 ntBASIC1.73□□□□□ -2.13
PRPF3O43395 RNU6-794P-201ENST00000517261 64 ntBASIC1.73□□□□□ -2.13
PRPF3O43395 AC109810.1-201ENST00000534066 224 ntBASIC1.73□□□□□ -2.13
PRPF3O43395 AL645939.4-201ENST00000604495 135 ntBASIC1.73□□□□□ -2.13
PRPF3O43395 AL359821.1-201ENST00000605519 182 ntBASIC1.73□□□□□ -2.13
PRPF3O43395 Y_RNA.29-201ENST00000362570 113 ntBASIC1.72□□□□□ -2.13
PRPF3O43395 RNU1-42P-201ENST00000364033 160 ntBASIC1.72□□□□□ -2.13
PRPF3O43395 MIR320A-201ENST00000385302 82 ntBASIC1.72□□□□□ -2.13
PRPF3O43395 SNORA79-201ENST00000408376 140 ntBASIC1.72□□□□□ -2.13
PRPF3O43395 RNU2-70P-201ENST00000410718 179 ntBASIC1.72□□□□□ -2.13
PRPF3O43395 RNU6-922P-201ENST00000516753 99 ntBASIC1.72□□□□□ -2.13
PRPF3O43395 SNORA74.3-201ENST00000517108 154 ntBASIC1.72□□□□□ -2.13
PRPF3O43395 RNU6-365P-201ENST00000517113 106 ntBASIC1.72□□□□□ -2.13
PRPF3O43395 MIR4303-201ENST00000581299 66 ntBASIC1.72□□□□□ -2.13
PRPF3O43395 Y_RNA.370-201ENST00000365589 108 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 SNORD24-201ENST00000383884 75 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 Y_RNA.508-201ENST00000384502 114 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 SNORA67.6-201ENST00000391093 99 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 MTND5P15-201ENST00000434246 349 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 AC108059.2-201ENST00000434626 151 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.71□□□□□ -2.14
PRPF3O43395 Y_RNA.666-201ENST00000516187 112 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 RNU6-970P-201ENST00000516312 107 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 RN7SKP88-201ENST00000516847 250 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 AP002392.1-201ENST00000537692 208 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 7SK.8-201ENST00000612110 250 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 7SK.11-201ENST00000615477 250 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 AC015726.2-201ENST00000620112 122 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 MIR8065-201ENST00000620577 100 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 7SK.13-201ENST00000622040 250 ntBASIC1.71□□□□□ -2.14
PRPF3O43395 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.7□□□□□ -2.14
PRPF3O43395 Y_RNA.91-201ENST00000363042 107 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 Y_RNA.233-201ENST00000364407 101 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 RNU6-275P-201ENST00000364910 107 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 SNORA25.9-201ENST00000365087 128 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 SNORD41-201ENST00000386967 70 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 MIR548O-201ENST00000408583 114 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.7□□□□□ -2.14
PRPF3O43395 BTF3P4-201ENST00000418852 495 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 AC023790.1-201ENST00000482174 347 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 TRMT112P2-201ENST00000512910 132 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 RNU6-504P-201ENST00000516568 104 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 SNORA81.3-201ENST00000517283 198 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 AC022559.1-201ENST00000520905 205 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 AC072026.1-201ENST00000605023 201 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 AP000648.3-201ENST00000623539 4507 ntBASIC1.7□□□□□ -2.14
PRPF3O43395 Y_RNA.75-201ENST00000362927 97 ntBASIC1.69□□□□□ -2.14
PRPF3O43395 Y_RNA.118-201ENST00000363300 101 ntBASIC1.69□□□□□ -2.14
PRPF3O43395 Y_RNA.634-201ENST00000364811 113 ntBASIC1.69□□□□□ -2.14
PRPF3O43395 Y_RNA.412-201ENST00000384001 104 ntBASIC1.69□□□□□ -2.14
PRPF3O43395 Y_RNA.785-201ENST00000384290 109 ntBASIC1.69□□□□□ -2.14
PRPF3O43395 RNU4-43P-201ENST00000410628 137 ntBASIC1.69□□□□□ -2.14
PRPF3O43395 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.69□□□□□ -2.14
PRPF3O43395 AL354695.1-201ENST00000427935 228 ntBASIC1.69□□□□□ -2.14
PRPF3O43395 SNRPGP13-201ENST00000442212 177 ntBASIC1.69□□□□□ -2.14
PRPF3O43395 RNU6-197P-201ENST00000516680 100 ntBASIC1.69□□□□□ -2.14
PRPF3O43395 SNORA31.24-201ENST00000517232 57 ntBASIC1.69□□□□□ -2.14
PRPF3O43395 U6.106-201ENST00000636360 105 ntBASIC1.69□□□□□ -2.14
PRPF3O43395 AC087499.4-201ENST00000448505 178 ntBASIC1.68□□□□□ -2.14
PRPF3O43395 RNU6-1219P-201ENST00000516143 112 ntBASIC1.68□□□□□ -2.14
PRPF3O43395 RNU7-25P-201ENST00000516544 62 ntBASIC1.68□□□□□ -2.14
PRPF3O43395 SNORA18.7-201ENST00000516910 131 ntBASIC1.68□□□□□ -2.14
PRPF3O43395 AC097639.2-201ENST00000603159 172 ntBASIC1.68□□□□□ -2.14
PRPF3O43395 MIR8070-201ENST00000616510 88 ntBASIC1.68□□□□□ -2.14
PRPF3O43395 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
PRPF3O43395 U8.1-201ENST00000362843 134 ntBASIC1.67□□□□□ -2.14
PRPF3O43395 RNU6-1054P-201ENST00000411293 104 ntBASIC1.67□□□□□ -2.14
PRPF3O43395 RNU7-120P-201ENST00000459334 63 ntBASIC1.67□□□□□ -2.14
PRPF3O43395 SNORD123-201ENST00000459473 70 ntBASIC1.67□□□□□ -2.14
PRPF3O43395 RNU6-693P-201ENST00000516134 107 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms