Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 MIR101-2-201ENST00000362195 79 ntBASIC5.5□□□□□ -1.53
MSH5O43196 RNA5SP124-201ENST00000362739 110 ntBASIC5.5□□□□□ -1.53
MSH5O43196 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.5□□□□□ -1.53
MSH5O43196 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC5.5□□□□□ -1.53
MSH5O43196 MIR6891-201ENST00000618788 93 ntBASIC5.5□□□□□ -1.53
MSH5O43196 AC022513.1-201ENST00000624512 117 ntBASIC5.5□□□□□ -1.53
MSH5O43196 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MSH5O43196 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC5.5□□□□□ -1.53
MSH5O43196 MIR520C-201ENST00000385005 87 ntBASIC5.49□□□□□ -1.53
MSH5O43196 AC025033.1-201ENST00000463883 194 ntBASIC5.49□□□□□ -1.53
MSH5O43196 MIR548H5-201ENST00000580314 60 ntBASIC5.49□□□□□ -1.53
MSH5O43196 MIR3199-1-201ENST00000582434 88 ntBASIC5.49□□□□□ -1.53
MSH5O43196 AL121772.2-201ENST00000614331 297 ntBASIC5.49□□□□□ -1.53
MSH5O43196 AC009093.8-201ENST00000641769 292 ntBASIC5.49□□□□□ -1.53
MSH5O43196 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.49□□□□□ -1.53
MSH5O43196 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MSH5O43196 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSH5O43196 RNU6-495P-201ENST00000362995 107 ntBASIC5.48□□□□□ -1.53
MSH5O43196 RNU1-105P-201ENST00000363470 161 ntBASIC5.48□□□□□ -1.53
MSH5O43196 MIR491-201ENST00000384877 84 ntBASIC5.48□□□□□ -1.53
MSH5O43196 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
MSH5O43196 RNU4ATAC16P-201ENST00000408512 126 ntBASIC5.48□□□□□ -1.53
MSH5O43196 AC006539.3-201ENST00000454258 129 ntBASIC5.48□□□□□ -1.53
MSH5O43196 RNU7-10P-201ENST00000607194 63 ntBASIC5.48□□□□□ -1.53
MSH5O43196 MIR6740-201ENST00000618268 113 ntBASIC5.48□□□□□ -1.53
MSH5O43196 MIR6500-201ENST00000622700 86 ntBASIC5.48□□□□□ -1.53
MSH5O43196 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.48□□□□□ -1.53
MSH5O43196 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.48□□□□□ -1.53
MSH5O43196 SNORA31-201ENST00000362607 130 ntBASIC5.47□□□□□ -1.53
MSH5O43196 SNORA73.2-201ENST00000364946 201 ntBASIC5.47□□□□□ -1.53
MSH5O43196 SNORA9-201ENST00000384215 133 ntBASIC5.47□□□□□ -1.53
MSH5O43196 RNA5SP38-201ENST00000410750 119 ntBASIC5.47□□□□□ -1.53
MSH5O43196 SNORA70.24-201ENST00000517233 118 ntBASIC5.47□□□□□ -1.53
MSH5O43196 SNORA51-201ENST00000606420 132 ntBASIC5.47□□□□□ -1.53
MSH5O43196 AC019176.2-201ENST00000611579 315 ntBASIC5.47□□□□□ -1.53
MSH5O43196 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MSH5O43196 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.47□□□□□ -1.53
MSH5O43196 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
MSH5O43196 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
MSH5O43196 RNU1-109P-201ENST00000383960 147 ntBASIC5.46□□□□□ -1.54
MSH5O43196 ABCF2P2-201ENST00000450549 296 ntBASIC5.46□□□□□ -1.54
MSH5O43196 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC5.46□□□□□ -1.54
MSH5O43196 AL365361.1-201ENST00000566942 3481 ntBASIC5.46□□□□□ -1.54
MSH5O43196 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
MSH5O43196 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
MSH5O43196 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.45□□□□□ -1.54
MSH5O43196 AC092435.3-201ENST00000565538 3654 ntBASIC5.45□□□□□ -1.54
MSH5O43196 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MSH5O43196 RNU6-1328P-201ENST00000410938 106 ntBASIC5.45□□□□□ -1.54
MSH5O43196 SNORA74D-201ENST00000516404 141 ntBASIC5.45□□□□□ -1.54
MSH5O43196 MIR3169-201ENST00000578032 83 ntBASIC5.45□□□□□ -1.54
MSH5O43196 MIR3200-201ENST00000580767 85 ntBASIC5.45□□□□□ -1.54
MSH5O43196 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH5O43196 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH5O43196 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH5O43196 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.44□□□□□ -1.54
MSH5O43196 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC5.44□□□□□ -1.54
MSH5O43196 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH5O43196 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH5O43196 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
MSH5O43196 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
MSH5O43196 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.43□□□□□ -1.54
MSH5O43196 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.43□□□□□ -1.54
MSH5O43196 AC016717.2-201ENST00000609089 5141 ntBASIC5.43□□□□□ -1.54
MSH5O43196 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.43□□□□□ -1.54
MSH5O43196 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSH5O43196 MIR423-201ENST00000362201 94 ntBASIC5.43□□□□□ -1.54
MSH5O43196 RNA5SP119-201ENST00000362715 117 ntBASIC5.43□□□□□ -1.54
MSH5O43196 SNORA25.3-201ENST00000363205 127 ntBASIC5.43□□□□□ -1.54
MSH5O43196 RNU6-260P-201ENST00000384092 107 ntBASIC5.43□□□□□ -1.54
MSH5O43196 MIR7-2-201ENST00000384970 110 ntBASIC5.43□□□□□ -1.54
MSH5O43196 Y_RNA.588-201ENST00000391254 102 ntBASIC5.43□□□□□ -1.54
MSH5O43196 AL359511.1-201ENST00000402970 211 ntBASIC5.43□□□□□ -1.54
MSH5O43196 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSH5O43196 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MSH5O43196 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
MSH5O43196 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
MSH5O43196 RNU6-1165P-201ENST00000410119 107 ntBASIC5.42□□□□□ -1.54
MSH5O43196 Evf-2_5p.1-201ENST00000614213 142 ntBASIC5.42□□□□□ -1.54
MSH5O43196 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSH5O43196 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSH5O43196 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
MSH5O43196 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
MSH5O43196 Z82217.1-201ENST00000625157 8149 ntBASIC5.41□□□□□ -1.54
MSH5O43196 RNU6-23P-201ENST00000363283 107 ntBASIC5.41□□□□□ -1.54
MSH5O43196 Y_RNA.330-201ENST00000365230 109 ntBASIC5.41□□□□□ -1.54
MSH5O43196 RNU6ATAC29P-201ENST00000408088 125 ntBASIC5.41□□□□□ -1.54
MSH5O43196 AC009474.2-201ENST00000451383 136 ntBASIC5.41□□□□□ -1.54
MSH5O43196 TRBV12-2-201ENST00000489763 344 ntBASIC5.41□□□□□ -1.54
MSH5O43196 MIR514B-201ENST00000516774 80 ntBASIC5.41□□□□□ -1.54
MSH5O43196 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.41□□□□□ -1.54
MSH5O43196 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
MSH5O43196 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
MSH5O43196 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
MSH5O43196 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MSH5O43196 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
MSH5O43196 SNORA48.1-201ENST00000390879 135 ntBASIC5.4□□□□□ -1.54
MSH5O43196 SNORA3C-201ENST00000408792 125 ntBASIC5.4□□□□□ -1.54
MSH5O43196 MIR1911-201ENST00000410783 80 ntBASIC5.4□□□□□ -1.54
MSH5O43196 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 1540 ms