Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 MIR934-201ENST00000401241 83 ntBASIC1.59□□□□□ -2.15
NKX2-8O15522 RNU4-43P-201ENST00000410628 137 ntBASIC1.59□□□□□ -2.15
NKX2-8O15522 SNX2P2-201ENST00000424553 323 ntBASIC1.59□□□□□ -2.15
NKX2-8O15522 RNU6-504P-201ENST00000516568 104 ntBASIC1.59□□□□□ -2.15
NKX2-8O15522 RNU6-861P-201ENST00000516745 106 ntBASIC1.59□□□□□ -2.15
NKX2-8O15522 MIR4255-201ENST00000579351 72 ntBASIC1.59□□□□□ -2.15
NKX2-8O15522 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
NKX2-8O15522 AL512598.1-201ENST00000610158 273 ntBASIC1.59□□□□□ -2.15
NKX2-8O15522 RNU6-312P-201ENST00000364629 107 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 SNORA25.9-201ENST00000365087 128 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 RNU6-1065P-201ENST00000384513 106 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 MIR653-201ENST00000385279 96 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 AL451046.2-201ENST00000403074 277 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 MIR548O-201ENST00000408583 114 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 RN7SL274P-201ENST00000492268 272 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 RNU6-693P-201ENST00000516134 107 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 RNU6-922P-201ENST00000516753 99 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 AL160236.1-201ENST00000556317 195 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 MIR4419B-201ENST00000577260 68 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 AL513534.2-201ENST00000603836 250 ntBASIC1.58□□□□□ -2.16
NKX2-8O15522 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
NKX2-8O15522 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NKX2-8O15522 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
NKX2-8O15522 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.57□□□□□ -2.16
NKX2-8O15522 Y_RNA.23-201ENST00000362496 106 ntBASIC1.57□□□□□ -2.16
NKX2-8O15522 RNU1-78P-201ENST00000391248 165 ntBASIC1.57□□□□□ -2.16
NKX2-8O15522 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.57□□□□□ -2.16
NKX2-8O15522 Y_RNA.662-201ENST00000516028 97 ntBASIC1.57□□□□□ -2.16
NKX2-8O15522 RNU7-25P-201ENST00000516544 62 ntBASIC1.57□□□□□ -2.16
NKX2-8O15522 RNU6-1270P-201ENST00000517128 108 ntBASIC1.57□□□□□ -2.16
NKX2-8O15522 MIR3935-201ENST00000583472 104 ntBASIC1.57□□□□□ -2.16
NKX2-8O15522 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
NKX2-8O15522 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
NKX2-8O15522 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.57□□□□□ -2.16
NKX2-8O15522 RNU6-682P-201ENST00000363843 106 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 Y_RNA.355-201ENST00000365462 98 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 SNORD24-201ENST00000383884 75 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 RNU6-643P-201ENST00000384018 107 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 SNORD61-201ENST00000384252 73 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 Y_RNA.547-201ENST00000384654 119 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 RNU2-64P-201ENST00000411315 191 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 AC006461.1-201ENST00000412637 326 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 AC027119.1-201ENST00000440877 241 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 RNU6-830P-201ENST00000516353 107 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 SNORA18.7-201ENST00000516910 131 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 MIR4431-201ENST00000579990 94 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 AC097639.2-201ENST00000603159 172 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 AL645939.4-201ENST00000604495 135 ntBASIC1.56□□□□□ -2.16
NKX2-8O15522 Y_RNA.66-201ENST00000362862 102 ntBASIC1.55□□□□□ -2.16
NKX2-8O15522 Y_RNA.118-201ENST00000363300 101 ntBASIC1.55□□□□□ -2.16
NKX2-8O15522 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
NKX2-8O15522 Y_RNA.240-201ENST00000364469 95 ntBASIC1.55□□□□□ -2.16
NKX2-8O15522 Y_RNA.508-201ENST00000384502 114 ntBASIC1.55□□□□□ -2.16
NKX2-8O15522 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
NKX2-8O15522 SEPT7P4-201ENST00000437076 306 ntBASIC1.55□□□□□ -2.16
NKX2-8O15522 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.55□□□□□ -2.16
NKX2-8O15522 MIR378D2-201ENST00000580636 98 ntBASIC1.55□□□□□ -2.16
NKX2-8O15522 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
NKX2-8O15522 RNU6-888P-201ENST00000363010 101 ntBASIC1.54□□□□□ -2.16
NKX2-8O15522 Y_RNA.270-201ENST00000364693 104 ntBASIC1.54□□□□□ -2.16
NKX2-8O15522 Y_RNA.357-201ENST00000365487 109 ntBASIC1.54□□□□□ -2.16
NKX2-8O15522 RNU6-907P-201ENST00000390924 102 ntBASIC1.54□□□□□ -2.16
NKX2-8O15522 AC245517.4-201ENST00000448601 281 ntBASIC1.54□□□□□ -2.16
NKX2-8O15522 SNORD123-201ENST00000459473 70 ntBASIC1.54□□□□□ -2.16
NKX2-8O15522 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.54□□□□□ -2.16
NKX2-8O15522 RNA5SP445-201ENST00000515889 115 ntBASIC1.54□□□□□ -2.16
NKX2-8O15522 SNORD53B-201ENST00000577887 78 ntBASIC1.54□□□□□ -2.16
NKX2-8O15522 AC098479.1-201ENST00000609225 154 ntBASIC1.54□□□□□ -2.16
NKX2-8O15522 AL442644.1-201ENST00000454390 3105 ntBASIC1.53□□□□□ -2.16
NKX2-8O15522 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
NKX2-8O15522 MIR518F-201ENST00000384973 87 ntBASIC1.53□□□□□ -2.16
NKX2-8O15522 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
NKX2-8O15522 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
NKX2-8O15522 U8.17-201ENST00000391292 132 ntBASIC1.53□□□□□ -2.16
NKX2-8O15522 AC107027.2-201ENST00000512197 115 ntBASIC1.53□□□□□ -2.16
NKX2-8O15522 SNORD116-25-201ENST00000516517 92 ntBASIC1.53□□□□□ -2.16
NKX2-8O15522 AC007751.1-201ENST00000529260 376 ntBASIC1.53□□□□□ -2.16
NKX2-8O15522 MIR3122-201ENST00000577243 73 ntBASIC1.53□□□□□ -2.16
NKX2-8O15522 GHRLOS.1-201ENST00000610995 70 ntBASIC1.53□□□□□ -2.16
NKX2-8O15522 FTX_2.1-201ENST00000618816 94 ntBASIC1.53□□□□□ -2.16
NKX2-8O15522 SNORD115-28-201ENST00000363931 81 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 RNU6-60P-201ENST00000364792 103 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 Y_RNA.521-201ENST00000384560 114 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 MIR548A2-201ENST00000384956 97 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 SNORD41-201ENST00000386967 70 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 SUMO2P12-201ENST00000405924 140 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 RPS27P16-201ENST00000425758 201 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.52□□□□□ -2.17
NKX2-8O15522 AC009474.2-201ENST00000451383 136 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 RPL30P7-201ENST00000479312 323 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 SNORA74.3-201ENST00000517108 154 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.52□□□□□ -2.17
NKX2-8O15522 AL357312.1-201ENST00000603879 298 ntBASIC1.52□□□□□ -2.17
NKX2-8O15522 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
NKX2-8O15522 Y_RNA.150-201ENST00000363562 102 ntBASIC1.51□□□□□ -2.17
NKX2-8O15522 AC074198.2-201ENST00000508153 258 ntBASIC1.51□□□□□ -2.17
NKX2-8O15522 RNU4-57P-201ENST00000515980 135 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms