Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 RNU6-1313P-201ENST00000362622 102 ntBASIC4.23□□□□□ -1.73
VGFO15240 AC069257.2-201ENST00000441819 155 ntBASIC4.23□□□□□ -1.73
VGFO15240 AC108938.1-201ENST00000451204 136 ntBASIC4.23□□□□□ -1.73
VGFO15240 HMGN1P18-201ENST00000457642 277 ntBASIC4.23□□□□□ -1.73
VGFO15240 RNU7-67P-201ENST00000459003 62 ntBASIC4.23□□□□□ -1.73
VGFO15240 RNU6-958P-201ENST00000516995 106 ntBASIC4.23□□□□□ -1.73
VGFO15240 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC4.23□□□□□ -1.73
VGFO15240 AC007318.2-201ENST00000620999 243 ntBASIC4.23□□□□□ -1.73
VGFO15240 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VGFO15240 Y_RNA.370-201ENST00000365589 108 ntBASIC4.22□□□□□ -1.73
VGFO15240 RNU6-24P-201ENST00000384440 107 ntBASIC4.22□□□□□ -1.73
VGFO15240 RN7SL20P-201ENST00000488827 297 ntBASIC4.22□□□□□ -1.73
VGFO15240 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
VGFO15240 Y_RNA.611-201ENST00000410682 108 ntBASIC4.21□□□□□ -1.74
VGFO15240 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.21□□□□□ -1.74
VGFO15240 MIR1270-201ENST00000459320 83 ntBASIC4.21□□□□□ -1.74
VGFO15240 RNU7-34P-201ENST00000459394 64 ntBASIC4.21□□□□□ -1.74
VGFO15240 AC108729.3-201ENST00000513484 108 ntBASIC4.21□□□□□ -1.74
VGFO15240 MIR3616-201ENST00000584070 92 ntBASIC4.21□□□□□ -1.74
VGFO15240 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VGFO15240 SNORD115-3-201ENST00000363100 82 ntBASIC4.2□□□□□ -1.74
VGFO15240 RNU6-833P-201ENST00000363486 107 ntBASIC4.2□□□□□ -1.74
VGFO15240 SNORA32-201ENST00000384072 121 ntBASIC4.2□□□□□ -1.74
VGFO15240 U8.15-201ENST00000390947 134 ntBASIC4.2□□□□□ -1.74
VGFO15240 U8.16-201ENST00000391279 133 ntBASIC4.2□□□□□ -1.74
VGFO15240 AL034345.1-201ENST00000407768 123 ntBASIC4.2□□□□□ -1.74
VGFO15240 RNU1-143P-201ENST00000516296 146 ntBASIC4.2□□□□□ -1.74
VGFO15240 SNORA31.10-201ENST00000516482 106 ntBASIC4.2□□□□□ -1.74
VGFO15240 AC069114.2-201ENST00000604699 304 ntBASIC4.2□□□□□ -1.74
VGFO15240 U1.23-201ENST00000610293 146 ntBASIC4.2□□□□□ -1.74
VGFO15240 RNU1-68P-201ENST00000615382 146 ntBASIC4.2□□□□□ -1.74
VGFO15240 U1.39-201ENST00000621562 146 ntBASIC4.2□□□□□ -1.74
VGFO15240 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.2□□□□□ -1.74
VGFO15240 MIR6841-201ENST00000637129 72 ntBASIC4.2□□□□□ -1.74
VGFO15240 AP000648.3-201ENST00000623539 4507 ntBASIC4.2□□□□□ -1.74
VGFO15240 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
VGFO15240 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VGFO15240 RNU6-805P-201ENST00000365643 106 ntBASIC4.19□□□□□ -1.74
VGFO15240 SNORD58A-201ENST00000383875 65 ntBASIC4.19□□□□□ -1.74
VGFO15240 MIR516B2-201ENST00000385190 85 ntBASIC4.19□□□□□ -1.74
VGFO15240 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC4.19□□□□□ -1.74
VGFO15240 DNAJC19P9-201ENST00000555084 351 ntBASIC4.19□□□□□ -1.74
VGFO15240 AC019288.1-201ENST00000557918 224 ntBASIC4.19□□□□□ -1.74
VGFO15240 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.19□□□□□ -1.74
VGFO15240 MIR376B-201ENST00000614515 100 ntBASIC4.19□□□□□ -1.74
VGFO15240 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
VGFO15240 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.19□□□□□ -1.74
VGFO15240 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VGFO15240 AL442644.1-201ENST00000454390 3105 ntBASIC4.18□□□□□ -1.74
VGFO15240 RNU6-461P-201ENST00000364195 107 ntBASIC4.18□□□□□ -1.74
VGFO15240 RNU6-1019P-201ENST00000364424 107 ntBASIC4.18□□□□□ -1.74
VGFO15240 SNORA9.2-201ENST00000365361 133 ntBASIC4.18□□□□□ -1.74
VGFO15240 AC087499.2-201ENST00000432861 149 ntBASIC4.18□□□□□ -1.74
VGFO15240 RNA5SP217-201ENST00000515959 91 ntBASIC4.18□□□□□ -1.74
VGFO15240 RNU7-12P-201ENST00000516030 62 ntBASIC4.18□□□□□ -1.74
VGFO15240 U4atac.1-201ENST00000618345 95 ntBASIC4.18□□□□□ -1.74
VGFO15240 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VGFO15240 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
VGFO15240 RPS29P29-201ENST00000456396 171 ntBASIC4.17□□□□□ -1.74
VGFO15240 AC005786.1-201ENST00000588553 154 ntBASIC4.17□□□□□ -1.74
VGFO15240 MIR4791-201ENST00000607666 84 ntBASIC4.17□□□□□ -1.74
VGFO15240 AC022513.1-201ENST00000624512 117 ntBASIC4.17□□□□□ -1.74
VGFO15240 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VGFO15240 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VGFO15240 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
VGFO15240 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VGFO15240 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.16□□□□□ -1.74
VGFO15240 Y_RNA.4-201ENST00000362333 112 ntBASIC4.16□□□□□ -1.74
VGFO15240 Y_RNA.430-201ENST00000384081 110 ntBASIC4.16□□□□□ -1.74
VGFO15240 HSPE1P9-201ENST00000440046 311 ntBASIC4.16□□□□□ -1.74
VGFO15240 RNA5SP168-201ENST00000516642 112 ntBASIC4.16□□□□□ -1.74
VGFO15240 AC104027.1-201ENST00000521887 300 ntBASIC4.16□□□□□ -1.74
VGFO15240 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.16□□□□□ -1.74
VGFO15240 AC007336.1-201ENST00000576365 3828 ntBASIC4.16□□□□□ -1.74
VGFO15240 AC026271.5-201ENST00000577873 130 ntBASIC4.16□□□□□ -1.74
VGFO15240 MIR6717-201ENST00000622747 73 ntBASIC4.16□□□□□ -1.74
VGFO15240 MIR4662A-201ENST00000637499 67 ntBASIC4.16□□□□□ -1.74
VGFO15240 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VGFO15240 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VGFO15240 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
VGFO15240 MIR452-201ENST00000385020 85 ntBASIC4.15□□□□□ -1.75
VGFO15240 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
VGFO15240 IGHVIII-5-1-201ENST00000523059 99 ntBASIC4.15□□□□□ -1.75
VGFO15240 AC079600.2-201ENST00000550076 130 ntBASIC4.15□□□□□ -1.75
VGFO15240 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
VGFO15240 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.14□□□□□ -1.75
VGFO15240 RNU6-950P-201ENST00000384651 107 ntBASIC4.14□□□□□ -1.75
VGFO15240 SNORA26.6-201ENST00000391256 115 ntBASIC4.14□□□□□ -1.75
VGFO15240 RPL32P35-201ENST00000415214 394 ntBASIC4.14□□□□□ -1.75
VGFO15240 AC090844.1-201ENST00000422019 156 ntBASIC4.14□□□□□ -1.75
VGFO15240 MIR3945-201ENST00000581853 98 ntBASIC4.14□□□□□ -1.75
VGFO15240 AC103810.7-201ENST00000607821 91 ntBASIC4.14□□□□□ -1.75
VGFO15240 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGFO15240 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGFO15240 Y_RNA.191-201ENST00000363972 113 ntBASIC4.13□□□□□ -1.75
VGFO15240 MIR136-201ENST00000385207 82 ntBASIC4.13□□□□□ -1.75
VGFO15240 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VGFO15240 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VGFO15240 RNA5SP274-201ENST00000410484 108 ntBASIC4.13□□□□□ -1.75
VGFO15240 SNORA31.26-201ENST00000517250 137 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms