Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 RNU6-938P-201ENST00000411285 103 ntBASIC1.68□□□□□ -2.14
CLIC1O00299 RNA5SP508-201ENST00000411327 119 ntBASIC1.68□□□□□ -2.14
CLIC1O00299 AL445685.2-201ENST00000422551 342 ntBASIC1.68□□□□□ -2.14
CLIC1O00299 SNORA18.4-201ENST00000516440 124 ntBASIC1.68□□□□□ -2.14
CLIC1O00299 AL627230.6-201ENST00000611129 280 ntBASIC1.68□□□□□ -2.14
CLIC1O00299 AC015726.2-201ENST00000620112 122 ntBASIC1.68□□□□□ -2.14
CLIC1O00299 AC092881.1-201ENST00000638218 2733 ntBASIC1.68□□□□□ -2.14
CLIC1O00299 AC131280.1-202ENST00000624067 4211 ntBASIC1.67□□□□□ -2.14
CLIC1O00299 ICE2P2-201ENST00000483823 2787 ntBASIC1.67□□□□□ -2.14
CLIC1O00299 Y_RNA.37-201ENST00000362606 108 ntBASIC1.67□□□□□ -2.14
CLIC1O00299 Y_RNA.410-201ENST00000383992 113 ntBASIC1.67□□□□□ -2.14
CLIC1O00299 RNU4-61P-201ENST00000411243 107 ntBASIC1.67□□□□□ -2.14
CLIC1O00299 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
CLIC1O00299 MIR8074-201ENST00000615081 81 ntBASIC1.67□□□□□ -2.14
CLIC1O00299 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
CLIC1O00299 MIR136-201ENST00000385207 82 ntBASIC1.66□□□□□ -2.14
CLIC1O00299 MIR1267-201ENST00000408723 78 ntBASIC1.66□□□□□ -2.14
CLIC1O00299 AC003989.2-201ENST00000440224 169 ntBASIC1.66□□□□□ -2.14
CLIC1O00299 RPS29P11-201ENST00000496507 171 ntBASIC1.66□□□□□ -2.14
CLIC1O00299 MIR3910-1-201ENST00000580936 111 ntBASIC1.66□□□□□ -2.14
CLIC1O00299 AC131055.1-201ENST00000584626 316 ntBASIC1.66□□□□□ -2.14
CLIC1O00299 MIR376A2-201ENST00000636782 80 ntBASIC1.66□□□□□ -2.14
CLIC1O00299 SNORA20-201ENST00000384662 132 ntBASIC1.65□□□□□ -2.15
CLIC1O00299 Y_RNA.584-201ENST00000391090 114 ntBASIC1.65□□□□□ -2.15
CLIC1O00299 RNU6-460P-201ENST00000391158 108 ntBASIC1.65□□□□□ -2.15
CLIC1O00299 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.65□□□□□ -2.15
CLIC1O00299 AC087499.4-201ENST00000448505 178 ntBASIC1.65□□□□□ -2.15
CLIC1O00299 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.65□□□□□ -2.15
CLIC1O00299 RNU6-917P-201ENST00000516294 104 ntBASIC1.65□□□□□ -2.15
CLIC1O00299 SNORD36C-201ENST00000516733 66 ntBASIC1.65□□□□□ -2.15
CLIC1O00299 DEFB122-202ENST00000569013 197 ntBASIC1.65□□□□□ -2.15
CLIC1O00299 MIR4435-1-201ENST00000582552 80 ntBASIC1.65□□□□□ -2.15
CLIC1O00299 AC106754.2-201ENST00000623006 233 ntBASIC1.65□□□□□ -2.15
CLIC1O00299 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CLIC1O00299 AC010332.2-201ENST00000613083 1904 ntBASIC1.65□□□□□ -2.15
CLIC1O00299 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
CLIC1O00299 SNORA2.2-201ENST00000365473 135 ntBASIC1.64□□□□□ -2.15
CLIC1O00299 Y_RNA.420-201ENST00000384043 110 ntBASIC1.64□□□□□ -2.15
CLIC1O00299 MIR513A1-201ENST00000385138 129 ntBASIC1.64□□□□□ -2.15
CLIC1O00299 MIR653-201ENST00000385279 96 ntBASIC1.64□□□□□ -2.15
CLIC1O00299 U8.17-201ENST00000391292 132 ntBASIC1.64□□□□□ -2.15
CLIC1O00299 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.64□□□□□ -2.15
CLIC1O00299 RPL23AP42-201ENST00000471152 471 ntBASIC1.64□□□□□ -2.15
CLIC1O00299 AC015688.6-201ENST00000577737 104 ntBASIC1.64□□□□□ -2.15
CLIC1O00299 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.64□□□□□ -2.15
CLIC1O00299 MIR4648-201ENST00000580107 72 ntBASIC1.64□□□□□ -2.15
CLIC1O00299 FAM106DP-201ENST00000586416 501 ntBASIC1.64□□□□□ -2.15
CLIC1O00299 AP001485.1-201ENST00000604799 199 ntBASIC1.64□□□□□ -2.15
CLIC1O00299 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.64□□□□□ -2.15
CLIC1O00299 MIR6852-201ENST00000621699 66 ntBASIC1.64□□□□□ -2.15
CLIC1O00299 Y_RNA.52-201ENST00000362760 96 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 RNA5SP259-201ENST00000365541 109 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 RNU6-1189P-201ENST00000383958 107 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 MIR9-3-201ENST00000385084 90 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CLIC1O00299 Y_RNA.586-201ENST00000391146 98 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 RNU6-257P-201ENST00000410238 98 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 HMGN2P23-201ENST00000456759 269 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 RNA5SP182-201ENST00000516064 82 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 RNU7-181P-201ENST00000517234 74 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 AP003484.1-201ENST00000530974 250 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 MIR5197-201ENST00000583721 112 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 AP001340.1-201ENST00000624405 217 ntBASIC1.63□□□□□ -2.15
CLIC1O00299 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.62□□□□□ -2.15
CLIC1O00299 Y_RNA.494-201ENST00000384432 111 ntBASIC1.62□□□□□ -2.15
CLIC1O00299 MTND4LP9-201ENST00000427694 174 ntBASIC1.62□□□□□ -2.15
CLIC1O00299 TMSB4XP3-201ENST00000445144 114 ntBASIC1.62□□□□□ -2.15
CLIC1O00299 SCARNA15-202ENST00000516881 127 ntBASIC1.62□□□□□ -2.15
CLIC1O00299 RNU6-789P-201ENST00000517105 102 ntBASIC1.62□□□□□ -2.15
CLIC1O00299 RNU2-60P-201ENST00000517290 128 ntBASIC1.62□□□□□ -2.15
CLIC1O00299 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.62□□□□□ -2.15
CLIC1O00299 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.62□□□□□ -2.15
CLIC1O00299 U8.1-201ENST00000362843 134 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 Y_RNA.120-201ENST00000363304 110 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 Y_RNA.440-201ENST00000384120 114 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 SNORA40-201ENST00000388090 126 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 SNORA40.5-201ENST00000391061 128 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 SNORD123-201ENST00000459473 70 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 AC005908.1-201ENST00000468701 347 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 RPS26P48-201ENST00000491713 339 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 RNU6-406P-201ENST00000516470 107 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 RNU6-1149P-201ENST00000516810 97 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 SNORA18.7-201ENST00000516910 131 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 AC090049.2-201ENST00000550377 109 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 MIR548AR-201ENST00000582191 57 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 MTND5P32-201ENST00000560711 1802 ntBASIC1.61□□□□□ -2.15
CLIC1O00299 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.61□□□□□ -2.15
CLIC1O00299 RNU6-81P-201ENST00000365608 104 ntBASIC1.6□□□□□ -2.15
CLIC1O00299 MIR30A-201ENST00000385092 71 ntBASIC1.6□□□□□ -2.15
CLIC1O00299 RNA5SP236-201ENST00000516169 116 ntBASIC1.6□□□□□ -2.15
CLIC1O00299 Y_RNA.686-201ENST00000516548 134 ntBASIC1.6□□□□□ -2.15
CLIC1O00299 SNORA74.3-201ENST00000517108 154 ntBASIC1.6□□□□□ -2.15
CLIC1O00299 AC091895.1-201ENST00000624494 256 ntBASIC1.6□□□□□ -2.15
CLIC1O00299 MIR302D-201ENST00000362275 68 ntBASIC1.59□□□□□ -2.15
CLIC1O00299 SNORD115-34-201ENST00000362441 82 ntBASIC1.59□□□□□ -2.15
CLIC1O00299 SNORD115-12-201ENST00000362583 82 ntBASIC1.59□□□□□ -2.15
CLIC1O00299 SNORD115-29-201ENST00000362834 82 ntBASIC1.59□□□□□ -2.15
CLIC1O00299 SNORD115-9-201ENST00000362912 82 ntBASIC1.59□□□□□ -2.15
CLIC1O00299 SNORD115-21-201ENST00000362963 81 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms