Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RBMX2P4-201ENST00000441256 376 ntBASIC-1.43□□□□□ -2.64
COL6A5A8TX70 AC007012.1-201ENST00000567192 175 ntBASIC-1.43□□□□□ -2.64
COL6A5A8TX70 AC023158.2-201ENST00000614876 543 ntBASIC-1.43□□□□□ -2.64
COL6A5A8TX70 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.43□□□□□ -2.64
COL6A5A8TX70 AL390729.2-201ENST00000416137 156 ntBASIC-1.43□□□□□ -2.64
COL6A5A8TX70 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.43□□□□□ -2.64
COL6A5A8TX70 AC074290.1-201ENST00000448883 135 ntBASIC-1.43□□□□□ -2.64
COL6A5A8TX70 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.43□□□□□ -2.64
COL6A5A8TX70 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.43□□□□□ -2.64
COL6A5A8TX70 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.43□□□□□ -2.64
COL6A5A8TX70 MTND5P40-201ENST00000559945 246 ntBASIC-1.43□□□□□ -2.64
COL6A5A8TX70 MIR30D-201ENST00000362283 70 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 RNU6-853P-201ENST00000364306 107 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 MIR562-201ENST00000384894 95 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 AL603914.1-201ENST00000401964 204 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 RNU6-855P-201ENST00000410395 104 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 MTND1P21-201ENST00000412991 285 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 RNU7-128P-201ENST00000517247 62 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 BNIP3P9-201ENST00000603714 553 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 AL121655.1-201ENST00000605811 308 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 AC137590.2-201ENST00000619709 240 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 SNORD28B-201ENST00000390993 75 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 AC113618.1-201ENST00000416747 285 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 MTCO3P42-201ENST00000509488 518 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 MTCO3P39-201ENST00000514812 518 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 RNU6-416P-201ENST00000516265 103 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 AL359920.1-201ENST00000618332 176 ntBASIC-1.44□□□□□ -2.64
COL6A5A8TX70 RNY1P16-201ENST00000363063 111 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 RNU4-17P-201ENST00000365598 141 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 MTATP6P19-201ENST00000413797 659 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 Z83846.1-201ENST00000446798 265 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 AC115990.1-201ENST00000526957 301 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.45□□□□□ -2.64
COL6A5A8TX70 AC103591.3-201ENST00000608684 209 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 RNU6-278P-201ENST00000390945 109 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.45□□□□□ -2.64
COL6A5A8TX70 AC104629.1-201ENST00000494226 508 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 AC016632.1-201ENST00000503994 196 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.45□□□□□ -2.64
COL6A5A8TX70 SNORD115-29-201ENST00000362834 82 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 SNORD115-11-201ENST00000363616 82 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 SNORD115-22-201ENST00000364456 82 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 SNORD115-43-201ENST00000365503 82 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 SNORA62.4-201ENST00000365504 151 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 SNORD115-36-201ENST00000365629 82 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 RNU6-291P-201ENST00000384720 107 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.46□□□□□ -2.64
COL6A5A8TX70 AL122001.1-201ENST00000457027 370 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 RNU6-781P-201ENST00000516377 101 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 RNU6-143P-201ENST00000516942 93 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 RNU6-608P-201ENST00000383927 104 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 MTCYBP39-201ENST00000437562 491 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 Z98949.2-201ENST00000440996 144 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 AP000542.1-201ENST00000448473 371 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.46□□□□□ -2.64
COL6A5A8TX70 RNU6-958P-201ENST00000516995 106 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.46□□□□□ -2.64
COL6A5A8TX70 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.47□□□□□ -2.64
COL6A5A8TX70 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.47□□□□□ -2.64
COL6A5A8TX70 MTCO2P16-201ENST00000436962 677 ntBASIC-1.47□□□□□ -2.64
COL6A5A8TX70 NDUFA5P7-201ENST00000452914 242 ntBASIC-1.47□□□□□ -2.64
COL6A5A8TX70 RNU2-56P-201ENST00000516826 190 ntBASIC-1.47□□□□□ -2.64
COL6A5A8TX70 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.47□□□□□ -2.64
COL6A5A8TX70 MIR6888-201ENST00000621977 67 ntBASIC-1.47□□□□□ -2.64
COL6A5A8TX70 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.47□□□□□ -2.65
COL6A5A8TX70 RNU6-562P-201ENST00000362731 107 ntBASIC-1.47□□□□□ -2.65
COL6A5A8TX70 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.47□□□□□ -2.65
COL6A5A8TX70 VN1R10P-201ENST00000447106 875 ntBASIC-1.47□□□□□ -2.65
COL6A5A8TX70 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.47□□□□□ -2.65
COL6A5A8TX70 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.47□□□□□ -2.65
COL6A5A8TX70 SNORD56.1-201ENST00000362913 68 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 RNU6-774P-201ENST00000363238 107 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 AC019178.2-201ENST00000423595 505 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 GPR143P-201ENST00000434155 205 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 MTND3P5-201ENST00000512798 333 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 AL020997.3-201ENST00000602843 359 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 AL590084.2-201ENST00000401481 382 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 AC104563.1-201ENST00000476147 376 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 MTND1P7-201ENST00000632801 297 ntBASIC-1.48□□□□□ -2.65
COL6A5A8TX70 RNU6-132P-201ENST00000383863 107 ntBASIC-1.49□□□□□ -2.65
COL6A5A8TX70 RNU6-767P-201ENST00000384132 107 ntBASIC-1.49□□□□□ -2.65
COL6A5A8TX70 RNU6-437P-201ENST00000459408 95 ntBASIC-1.49□□□□□ -2.65
COL6A5A8TX70 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.49□□□□□ -2.65
COL6A5A8TX70 AC021443.1-201ENST00000604478 211 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms