Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 U6.95-201ENST00000636931 70 ntBASIC2.38□□□□□ -2.03
PCDHB4Q9Y5E5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHB4Q9Y5E5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 Y_RNA.336-201ENST00000365307 109 ntBASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 RNA5SP465-201ENST00000391195 109 ntBASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 HMGN2P39-201ENST00000398005 273 ntBASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 AC069257.2-201ENST00000441819 155 ntBASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 AC008413.1-201ENST00000511864 177 ntBASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 RNVU1-2-201ENST00000516326 135 ntBASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 RNU6-1116P-201ENST00000517269 99 ntBASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 MTND5P34-201ENST00000568888 325 ntBASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 AC108081.1-201ENST00000604358 221 ntBASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 SNORA28-201ENST00000606769 126 ntBASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 AC134878.1-201ENST00000619901 243 ntBASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDHB4Q9Y5E5 MIRLET7C-201ENST00000362160 84 ntBASIC2.36□□□□□ -2.03
PCDHB4Q9Y5E5 Y_RNA.547-201ENST00000384654 119 ntBASIC2.36□□□□□ -2.03
PCDHB4Q9Y5E5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PCDHB4Q9Y5E5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.36□□□□□ -2.03
PCDHB4Q9Y5E5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDHB4Q9Y5E5 HMGN2P32-201ENST00000444648 269 ntBASIC2.36□□□□□ -2.03
PCDHB4Q9Y5E5 AL021397.1-201ENST00000451806 248 ntBASIC2.36□□□□□ -2.03
PCDHB4Q9Y5E5 AC114811.1-201ENST00000507207 168 ntBASIC2.36□□□□□ -2.03
PCDHB4Q9Y5E5 AC009831.4-201ENST00000620744 325 ntBASIC2.36□□□□□ -2.03
PCDHB4Q9Y5E5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.36□□□□□ -2.03
PCDHB4Q9Y5E5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PCDHB4Q9Y5E5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHB4Q9Y5E5 SNORD115-28-201ENST00000363931 81 ntBASIC2.35□□□□□ -2.03
PCDHB4Q9Y5E5 SNORA63D-201ENST00000364359 132 ntBASIC2.35□□□□□ -2.03
PCDHB4Q9Y5E5 CYCTP-201ENST00000504253 315 ntBASIC2.35□□□□□ -2.03
PCDHB4Q9Y5E5 IGKV1-22-201ENST00000524313 326 ntBASIC2.35□□□□□ -2.03
PCDHB4Q9Y5E5 AC245884.12-201ENST00000615364 59 ntBASIC2.35□□□□□ -2.03
PCDHB4Q9Y5E5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHB4Q9Y5E5 Y_RNA.37-201ENST00000362606 108 ntBASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 SNORA4.2-201ENST00000365313 147 ntBASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 RNU6-1189P-201ENST00000383958 107 ntBASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 Y_RNA.410-201ENST00000383992 113 ntBASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 RNU6-163P-201ENST00000384396 106 ntBASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 AL445646.1-201ENST00000431784 216 ntBASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 RN7SKP19-201ENST00000516016 252 ntBASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 SNORD53-201ENST00000579969 78 ntBASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 AC104984.5-201ENST00000586878 94 ntBASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 AC015726.2-201ENST00000620112 122 ntBASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 MIR6132-201ENST00000622083 109 ntBASIC2.34□□□□□ -2.03
PCDHB4Q9Y5E5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PCDHB4Q9Y5E5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.34□□□□□ -2.04
PCDHB4Q9Y5E5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHB4Q9Y5E5 AL596028.1-201ENST00000326971 197 ntBASIC2.33□□□□□ -2.04
PCDHB4Q9Y5E5 MIRLET7F2-201ENST00000385277 83 ntBASIC2.33□□□□□ -2.04
PCDHB4Q9Y5E5 SNORA48.1-201ENST00000390879 135 ntBASIC2.33□□□□□ -2.04
PCDHB4Q9Y5E5 RN7SKP200-201ENST00000410564 320 ntBASIC2.33□□□□□ -2.04
PCDHB4Q9Y5E5 CALM2P4-201ENST00000430810 426 ntBASIC2.33□□□□□ -2.04
PCDHB4Q9Y5E5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHB4Q9Y5E5 RNA5SP200-201ENST00000516360 103 ntBASIC2.33□□□□□ -2.04
PCDHB4Q9Y5E5 SNORD36C-201ENST00000516733 66 ntBASIC2.33□□□□□ -2.04
PCDHB4Q9Y5E5 SNORD14A-201ENST00000606526 91 ntBASIC2.33□□□□□ -2.04
PCDHB4Q9Y5E5 MIR6873-201ENST00000622788 63 ntBASIC2.33□□□□□ -2.04
PCDHB4Q9Y5E5 AC005336.3-201ENST00000623833 2679 ntBASIC2.33□□□□□ -2.04
PCDHB4Q9Y5E5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 SNORA2.2-201ENST00000365473 135 ntBASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 RNY4P18-201ENST00000391107 89 ntBASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 AL034345.1-201ENST00000407768 123 ntBASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 RNU6-938P-201ENST00000411285 103 ntBASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 RNA5SP508-201ENST00000411327 119 ntBASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 AC104435.1-201ENST00000483483 166 ntBASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 MIR4435-1-201ENST00000582552 80 ntBASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 AL670379.3-201ENST00000605040 251 ntBASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 AC027279.3-201ENST00000625055 122 ntBASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.32□□□□□ -2.04
PCDHB4Q9Y5E5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.31□□□□□ -2.04
PCDHB4Q9Y5E5 RNA5SP126-201ENST00000365092 109 ntBASIC2.31□□□□□ -2.04
PCDHB4Q9Y5E5 U8.16-201ENST00000391279 133 ntBASIC2.31□□□□□ -2.04
PCDHB4Q9Y5E5 RNA5SP501-201ENST00000410990 112 ntBASIC2.31□□□□□ -2.04
PCDHB4Q9Y5E5 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
PCDHB4Q9Y5E5 RNU6-113P-201ENST00000516653 101 ntBASIC2.31□□□□□ -2.04
PCDHB4Q9Y5E5 RNA5SP437-201ENST00000517249 129 ntBASIC2.31□□□□□ -2.04
PCDHB4Q9Y5E5 SUB1P4-201ENST00000566062 339 ntBASIC2.31□□□□□ -2.04
PCDHB4Q9Y5E5 AC025166.1-201ENST00000612411 163 ntBASIC2.31□□□□□ -2.04
PCDHB4Q9Y5E5 AP006437.1-201ENST00000641440 3685 ntBASIC2.3□□□□□ -2.04
PCDHB4Q9Y5E5 SNORA63.4-201ENST00000362763 126 ntBASIC2.3□□□□□ -2.04
PCDHB4Q9Y5E5 RNU6-153P-201ENST00000364422 104 ntBASIC2.3□□□□□ -2.04
PCDHB4Q9Y5E5 RNU6-424P-201ENST00000384367 105 ntBASIC2.3□□□□□ -2.04
PCDHB4Q9Y5E5 SNORD38C-201ENST00000384381 69 ntBASIC2.3□□□□□ -2.04
PCDHB4Q9Y5E5 RNU6-950P-201ENST00000384651 107 ntBASIC2.3□□□□□ -2.04
PCDHB4Q9Y5E5 MIR520A-201ENST00000384862 85 ntBASIC2.3□□□□□ -2.04
PCDHB4Q9Y5E5 HMGN2P38-201ENST00000423806 265 ntBASIC2.3□□□□□ -2.04
PCDHB4Q9Y5E5 RNU6-589P-201ENST00000516485 107 ntBASIC2.3□□□□□ -2.04
PCDHB4Q9Y5E5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.3□□□□□ -2.04
PCDHB4Q9Y5E5 Y_RNA.709-201ENST00000516952 92 ntBASIC2.3□□□□□ -2.04
PCDHB4Q9Y5E5 AL590808.1-201ENST00000618696 141 ntBASIC2.3□□□□□ -2.04
PCDHB4Q9Y5E5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
PCDHB4Q9Y5E5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
PCDHB4Q9Y5E5 Y_RNA.366-201ENST00000365540 102 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms