Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 AC245060.5-201ENST00000610778 3293 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 AL596211.1-201ENST00000569873 2277 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 MIR29C-201ENST00000385231 88 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 RNA5SP425-201ENST00000410336 112 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 RPL32P35-201ENST00000415214 394 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 CST9LP2-201ENST00000437612 320 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 RNU1-143P-201ENST00000516296 146 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 RNU2-35P-201ENST00000516446 142 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 RNU6-56P-201ENST00000516986 93 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 MIR4648-201ENST00000580107 72 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 U1.23-201ENST00000610293 146 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 uc_338.25-201ENST00000613756 156 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 RNU1-68P-201ENST00000615382 146 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 U1.39-201ENST00000621562 146 ntBASIC3.07□□□□□ -1.92
HCN4Q9Y3Q4 RNU1-58P-201ENST00000362413 163 ntBASIC3.06□□□□□ -1.92
HCN4Q9Y3Q4 RNU6-1131P-201ENST00000364955 107 ntBASIC3.06□□□□□ -1.92
HCN4Q9Y3Q4 U8.9-201ENST00000365667 134 ntBASIC3.06□□□□□ -1.92
HCN4Q9Y3Q4 RNU6-163P-201ENST00000384396 106 ntBASIC3.06□□□□□ -1.92
HCN4Q9Y3Q4 STAG3L5P-204ENST00000443759 179 ntBASIC3.06□□□□□ -1.92
HCN4Q9Y3Q4 UBBP3-201ENST00000445497 241 ntBASIC3.06□□□□□ -1.92
HCN4Q9Y3Q4 RNU6-1053P-201ENST00000515930 101 ntBASIC3.06□□□□□ -1.92
HCN4Q9Y3Q4 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.06□□□□□ -1.92
HCN4Q9Y3Q4 uc_338.1-201ENST00000612113 180 ntBASIC3.06□□□□□ -1.92
HCN4Q9Y3Q4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.06□□□□□ -1.92
HCN4Q9Y3Q4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HCN4Q9Y3Q4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HCN4Q9Y3Q4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HCN4Q9Y3Q4 RNU6-49P-201ENST00000384256 107 ntBASIC3.05□□□□□ -1.92
HCN4Q9Y3Q4 SNORA27-201ENST00000384323 126 ntBASIC3.05□□□□□ -1.92
HCN4Q9Y3Q4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.05□□□□□ -1.92
HCN4Q9Y3Q4 RNU6-904P-201ENST00000516206 101 ntBASIC3.05□□□□□ -1.92
HCN4Q9Y3Q4 AC022523.2-201ENST00000561045 150 ntBASIC3.05□□□□□ -1.92
HCN4Q9Y3Q4 MIR6817-201ENST00000615588 66 ntBASIC3.05□□□□□ -1.92
HCN4Q9Y3Q4 MIR2052-201ENST00000636055 55 ntBASIC3.05□□□□□ -1.92
HCN4Q9Y3Q4 AL162726.3-218ENST00000636401 95 ntBASIC3.05□□□□□ -1.92
HCN4Q9Y3Q4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HCN4Q9Y3Q4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.05□□□□□ -1.92
HCN4Q9Y3Q4 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
HCN4Q9Y3Q4 Y_RNA.140-201ENST00000363474 103 ntBASIC3.04□□□□□ -1.92
HCN4Q9Y3Q4 SNORD56.5-201ENST00000364281 72 ntBASIC3.04□□□□□ -1.92
HCN4Q9Y3Q4 Y_RNA.558-201ENST00000384685 113 ntBASIC3.04□□□□□ -1.92
HCN4Q9Y3Q4 AC104389.3-201ENST00000445629 235 ntBASIC3.04□□□□□ -1.92
HCN4Q9Y3Q4 RNU6-109P-201ENST00000516364 107 ntBASIC3.04□□□□□ -1.92
HCN4Q9Y3Q4 SNORA31.10-201ENST00000516482 106 ntBASIC3.04□□□□□ -1.92
HCN4Q9Y3Q4 RNU6-184P-201ENST00000516514 107 ntBASIC3.04□□□□□ -1.92
HCN4Q9Y3Q4 RNU6-1116P-201ENST00000517269 99 ntBASIC3.04□□□□□ -1.92
HCN4Q9Y3Q4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HCN4Q9Y3Q4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 SNORA9.2-201ENST00000365361 133 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 MIR489-201ENST00000384923 84 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 MIR1912-201ENST00000410389 80 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 AL035398.1-201ENST00000430869 322 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 HMGN2P3-201ENST00000433603 273 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 MTATP8P2-201ENST00000435212 202 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 HMGN2P5-201ENST00000436882 273 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 AC069257.2-201ENST00000441819 155 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 RNU7-96P-201ENST00000459535 64 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 RNU6-998P-201ENST00000515894 101 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 MIR4781-201ENST00000585250 76 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 HSPE1P19-201ENST00000603327 295 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 AC069114.2-201ENST00000604699 304 ntBASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HCN4Q9Y3Q4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-34-201ENST00000362441 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-12-201ENST00000362583 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-29-201ENST00000362834 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-9-201ENST00000362912 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-21-201ENST00000362963 81 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-14-201ENST00000363090 81 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-13-201ENST00000363358 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-41-201ENST00000363608 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-11-201ENST00000363616 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-5-201ENST00000363633 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-39-201ENST00000363694 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-4-201ENST00000363810 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 RNA5SP68-201ENST00000363885 119 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-16-201ENST00000363887 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-6-201ENST00000363942 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-42-201ENST00000364273 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-15-201ENST00000364809 81 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-1-201ENST00000364961 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-26-201ENST00000365067 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-10-201ENST00000365073 81 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-43-201ENST00000365503 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORD115-36-201ENST00000365629 82 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 RN7SKP200-201ENST00000410564 320 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 SNORA19.1-201ENST00000410656 129 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 RNA5SP344-201ENST00000411081 104 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 AC015922.2-201ENST00000435593 184 ntBASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.02□□□□□ -1.93
HCN4Q9Y3Q4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms