Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 AL137067.1-201ENST00000615933 120 ntBASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 ZNF720P1-201ENST00000562403 1939 ntBASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 AC016717.2-201ENST00000609089 5141 ntBASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SIT1Q9Y3P8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 SNORD115-3-201ENST00000363100 82 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 SNORD56.5-201ENST00000364281 72 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 SNORA63D-201ENST00000364359 132 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 U8.9-201ENST00000365667 134 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 RNU6-950P-201ENST00000384651 107 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 RNA5SP465-201ENST00000391195 109 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 CALM2P4-201ENST00000430810 426 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 COX6CP6-201ENST00000490840 228 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 RNU6-830P-201ENST00000516353 107 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 SNORA31.10-201ENST00000516482 106 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 AC008264.2-201ENST00000610193 3731 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 AL391516.1-201ENST00000554380 2449 ntBASIC2.39□□□□□ -2.03
SIT1Q9Y3P8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SIT1Q9Y3P8 SNORA2.2-201ENST00000365473 135 ntBASIC2.38□□□□□ -2.03
SIT1Q9Y3P8 Y_RNA.440-201ENST00000384120 114 ntBASIC2.38□□□□□ -2.03
SIT1Q9Y3P8 RNU6-938P-201ENST00000411285 103 ntBASIC2.38□□□□□ -2.03
SIT1Q9Y3P8 STAG3L5P-204ENST00000443759 179 ntBASIC2.38□□□□□ -2.03
SIT1Q9Y3P8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SIT1Q9Y3P8 Y_RNA.4-201ENST00000362333 112 ntBASIC2.37□□□□□ -2.03
SIT1Q9Y3P8 Y_RNA.140-201ENST00000363474 103 ntBASIC2.37□□□□□ -2.03
SIT1Q9Y3P8 SNORA38-201ENST00000363946 132 ntBASIC2.37□□□□□ -2.03
SIT1Q9Y3P8 Y_RNA.528-201ENST00000384575 108 ntBASIC2.37□□□□□ -2.03
SIT1Q9Y3P8 MIR570-201ENST00000384917 97 ntBASIC2.37□□□□□ -2.03
SIT1Q9Y3P8 MIR1263-201ENST00000408324 86 ntBASIC2.37□□□□□ -2.03
SIT1Q9Y3P8 RN7SKP200-201ENST00000410564 320 ntBASIC2.37□□□□□ -2.03
SIT1Q9Y3P8 MIR3613-201ENST00000579844 87 ntBASIC2.37□□□□□ -2.03
SIT1Q9Y3P8 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.37□□□□□ -2.03
SIT1Q9Y3P8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SIT1Q9Y3P8 RNU6-349P-201ENST00000362402 107 ntBASIC2.36□□□□□ -2.03
SIT1Q9Y3P8 Y_RNA.281-201ENST00000364774 94 ntBASIC2.36□□□□□ -2.03
SIT1Q9Y3P8 Y_RNA.366-201ENST00000365540 102 ntBASIC2.36□□□□□ -2.03
SIT1Q9Y3P8 SNORA64-201ENST00000384674 134 ntBASIC2.36□□□□□ -2.03
SIT1Q9Y3P8 AL627390.1-201ENST00000396055 340 ntBASIC2.36□□□□□ -2.03
SIT1Q9Y3P8 RNA5SP344-201ENST00000411081 104 ntBASIC2.36□□□□□ -2.03
SIT1Q9Y3P8 AC114811.1-201ENST00000507207 168 ntBASIC2.36□□□□□ -2.03
SIT1Q9Y3P8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.36□□□□□ -2.03
SIT1Q9Y3P8 MIR5094-201ENST00000578766 85 ntBASIC2.36□□□□□ -2.03
SIT1Q9Y3P8 MIR219B-201ENST00000637023 88 ntBASIC2.36□□□□□ -2.03
SIT1Q9Y3P8 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
SIT1Q9Y3P8 RNU6-833P-201ENST00000363486 107 ntBASIC2.35□□□□□ -2.03
SIT1Q9Y3P8 SNORD38C-201ENST00000384381 69 ntBASIC2.35□□□□□ -2.03
SIT1Q9Y3P8 MIR518A2-201ENST00000384966 87 ntBASIC2.35□□□□□ -2.03
SIT1Q9Y3P8 MIR548A1-201ENST00000385041 97 ntBASIC2.35□□□□□ -2.03
SIT1Q9Y3P8 SNORA48.1-201ENST00000390879 135 ntBASIC2.35□□□□□ -2.03
SIT1Q9Y3P8 AL034345.1-201ENST00000407768 123 ntBASIC2.35□□□□□ -2.03
SIT1Q9Y3P8 RNA5SP492-201ENST00000411330 114 ntBASIC2.35□□□□□ -2.03
SIT1Q9Y3P8 SNORD36C-201ENST00000516733 66 ntBASIC2.35□□□□□ -2.03
SIT1Q9Y3P8 AP003484.1-201ENST00000530974 250 ntBASIC2.35□□□□□ -2.03
SIT1Q9Y3P8 MIR5007-201ENST00000583098 95 ntBASIC2.35□□□□□ -2.03
SIT1Q9Y3P8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SIT1Q9Y3P8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SIT1Q9Y3P8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SIT1Q9Y3P8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
SIT1Q9Y3P8 RNU6-147P-201ENST00000383983 107 ntBASIC2.34□□□□□ -2.03
SIT1Q9Y3P8 RNU6-163P-201ENST00000384396 106 ntBASIC2.34□□□□□ -2.03
SIT1Q9Y3P8 RNU11-3P-201ENST00000391111 133 ntBASIC2.34□□□□□ -2.03
SIT1Q9Y3P8 HMGN2P39-201ENST00000398005 273 ntBASIC2.34□□□□□ -2.03
SIT1Q9Y3P8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.34□□□□□ -2.03
SIT1Q9Y3P8 RNU7-80P-201ENST00000459562 61 ntBASIC2.34□□□□□ -2.03
SIT1Q9Y3P8 RNU6-412P-201ENST00000516434 106 ntBASIC2.34□□□□□ -2.03
SIT1Q9Y3P8 MIR4679-2-201ENST00000578358 77 ntBASIC2.34□□□□□ -2.03
SIT1Q9Y3P8 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.34□□□□□ -2.04
SIT1Q9Y3P8 RNU6-424P-201ENST00000384367 105 ntBASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 MIR597-201ENST00000384968 97 ntBASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 RNU6-240P-201ENST00000516098 97 ntBASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 RPPH1-2P-201ENST00000516688 293 ntBASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 RNU6-295P-201ENST00000516901 104 ntBASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 SUB1P4-201ENST00000566062 339 ntBASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 AP000942.3-201ENST00000603702 160 ntBASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 AC015726.2-201ENST00000620112 122 ntBASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 AC092881.1-201ENST00000638218 2733 ntBASIC2.33□□□□□ -2.04
SIT1Q9Y3P8 AC245060.5-201ENST00000610778 3293 ntBASIC2.32□□□□□ -2.04
SIT1Q9Y3P8 Y_RNA.198-201ENST00000364013 98 ntBASIC2.32□□□□□ -2.04
SIT1Q9Y3P8 RNY1P6-201ENST00000384193 109 ntBASIC2.32□□□□□ -2.04
SIT1Q9Y3P8 Y_RNA.454-201ENST00000384224 113 ntBASIC2.32□□□□□ -2.04
SIT1Q9Y3P8 SNORA67.3-201ENST00000384366 140 ntBASIC2.32□□□□□ -2.04
SIT1Q9Y3P8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.32□□□□□ -2.04
SIT1Q9Y3P8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SIT1Q9Y3P8 HSPE1P9-201ENST00000440046 311 ntBASIC2.32□□□□□ -2.04
SIT1Q9Y3P8 RN7SL499P-201ENST00000481141 276 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 308.6 ms