Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RNU7-67P-201ENST00000459003 62 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 RNA5SP272-201ENST00000516095 111 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 AC069113.1-201ENST00000517763 267 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 YWHAEP2-201ENST00000580066 112 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 PART1_1.1-201ENST00000611761 217 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 AC069503.3-201ENST00000618674 145 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 U4.1-201ENST00000620349 87 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.74□□□□□ -2.69
UBE2D4Q9Y2X8 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.74□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-325P-201ENST00000411132 105 ntBASIC-1.74□□□□□ -2.69
UBE2D4Q9Y2X8 MTCO2P29-201ENST00000465212 189 ntBASIC-1.74□□□□□ -2.69
UBE2D4Q9Y2X8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.74□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-958P-201ENST00000516995 106 ntBASIC-1.74□□□□□ -2.69
UBE2D4Q9Y2X8 AL442663.2-201ENST00000554385 511 ntBASIC-1.74□□□□□ -2.69
UBE2D4Q9Y2X8 AC007671.2-201ENST00000637344 619 ntBASIC-1.74□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.75□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.75□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-266P-201ENST00000364225 107 ntBASIC-1.75□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.75□□□□□ -2.69
UBE2D4Q9Y2X8 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.75□□□□□ -2.69
UBE2D4Q9Y2X8 AL121757.2-201ENST00000611223 313 ntBASIC-1.75□□□□□ -2.69
UBE2D4Q9Y2X8 AC016911.1-201ENST00000613297 452 ntBASIC-1.75□□□□□ -2.69
UBE2D4Q9Y2X8 AC099654.12-201ENST00000639868 649 ntBASIC-1.75□□□□□ -2.69
UBE2D4Q9Y2X8 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-434P-201ENST00000384376 107 ntBASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-393P-201ENST00000384475 107 ntBASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-880P-201ENST00000384526 107 ntBASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-476P-201ENST00000384726 107 ntBASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-588P-201ENST00000410281 105 ntBASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 AC098614.3-201ENST00000438957 440 ntBASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 MTND1P27-201ENST00000451117 902 ntBASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 SNORD18.2-201ENST00000459604 70 ntBASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 MIR3920-201ENST00000581751 86 ntBASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 AC018714.1-201ENST00000605028 208 ntBASIC-1.76□□□□□ -2.69
UBE2D4Q9Y2X8 MIR20A-201ENST00000362279 71 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-442P-201ENST00000383968 104 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 RNU4-55P-201ENST00000410731 137 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 RPL22P17-201ENST00000438729 315 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 RPL30P10-201ENST00000488148 337 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-551P-201ENST00000516661 103 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-531P-201ENST00000516694 104 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-85P-201ENST00000605989 107 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 MIR6502-201ENST00000617296 76 ntBASIC-1.77□□□□□ -2.69
UBE2D4Q9Y2X8 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.78□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-831P-201ENST00000384548 107 ntBASIC-1.78□□□□□ -2.69
UBE2D4Q9Y2X8 MIR29B1-201ENST00000385015 81 ntBASIC-1.78□□□□□ -2.69
UBE2D4Q9Y2X8 RNU2-9P-201ENST00000410194 145 ntBASIC-1.78□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-370P-201ENST00000411008 104 ntBASIC-1.78□□□□□ -2.69
UBE2D4Q9Y2X8 AC093423.1-201ENST00000440817 142 ntBASIC-1.78□□□□□ -2.69
UBE2D4Q9Y2X8 MTCO1P29-201ENST00000496868 288 ntBASIC-1.78□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-966P-201ENST00000516479 104 ntBASIC-1.78□□□□□ -2.69
UBE2D4Q9Y2X8 MTATP6P15-201ENST00000527233 835 ntBASIC-1.78□□□□□ -2.69
UBE2D4Q9Y2X8 AC109347.2-201ENST00000610220 349 ntBASIC-1.78□□□□□ -2.69
UBE2D4Q9Y2X8 U6.114-201ENST00000636407 96 ntBASIC-1.78□□□□□ -2.69
UBE2D4Q9Y2X8 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.79□□□□□ -2.7
UBE2D4Q9Y2X8 RNU4-1-201ENST00000363925 141 ntBASIC-1.79□□□□□ -2.7
UBE2D4Q9Y2X8 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.79□□□□□ -2.7
UBE2D4Q9Y2X8 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.79□□□□□ -2.7
UBE2D4Q9Y2X8 U8.19-201ENST00000459095 133 ntBASIC-1.79□□□□□ -2.7
UBE2D4Q9Y2X8 U8.22-201ENST00000459141 133 ntBASIC-1.79□□□□□ -2.7
UBE2D4Q9Y2X8 RNU2-69P-201ENST00000516061 100 ntBASIC-1.79□□□□□ -2.7
UBE2D4Q9Y2X8 YWHAEP3-201ENST00000582767 121 ntBASIC-1.79□□□□□ -2.7
UBE2D4Q9Y2X8 AC005828.6-201ENST00000606610 232 ntBASIC-1.79□□□□□ -2.7
UBE2D4Q9Y2X8 RNU6-433P-201ENST00000363216 104 ntBASIC-1.8□□□□□ -2.7
UBE2D4Q9Y2X8 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.8□□□□□ -2.7
UBE2D4Q9Y2X8 RNU6-597P-201ENST00000365620 102 ntBASIC-1.8□□□□□ -2.7
UBE2D4Q9Y2X8 RNU6-576P-201ENST00000390854 102 ntBASIC-1.8□□□□□ -2.7
UBE2D4Q9Y2X8 MIR548K-201ENST00000408406 116 ntBASIC-1.8□□□□□ -2.7
UBE2D4Q9Y2X8 RNU6-757P-201ENST00000410334 100 ntBASIC-1.8□□□□□ -2.7
UBE2D4Q9Y2X8 AC244090.1-201ENST00000441884 93 ntBASIC-1.8□□□□□ -2.7
UBE2D4Q9Y2X8 MTND2P30-201ENST00000456663 382 ntBASIC-1.8□□□□□ -2.7
UBE2D4Q9Y2X8 AC022616.4-201ENST00000522985 181 ntBASIC-1.8□□□□□ -2.7
UBE2D4Q9Y2X8 AL137161.1-201ENST00000532231 390 ntBASIC-1.8□□□□□ -2.7
UBE2D4Q9Y2X8 AC141846.1-201ENST00000568348 142 ntBASIC-1.8□□□□□ -2.7
UBE2D4Q9Y2X8 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 SNORD115-6-201ENST00000363942 82 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 RNU6-280P-201ENST00000364145 104 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 SNORD70.1-201ENST00000391007 85 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 RNA5SP237-201ENST00000410414 113 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 ELOCP4-201ENST00000420090 333 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 AC084290.1-201ENST00000434995 374 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 AC027807.2-201ENST00000616099 408 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 AL445584.3-201ENST00000617173 78 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 AC072046.2-201ENST00000618366 268 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 MIR6818-201ENST00000621576 65 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 U6.115-201ENST00000636045 103 ntBASIC-1.81□□□□□ -2.7
UBE2D4Q9Y2X8 RNU5B-4P-201ENST00000363508 111 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 293.7 ms