Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MIR3658-201ENST00000636291 56 ntBASIC2.04□□□□□ -2.08
DKK3Q9UBP4 AC245060.5-201ENST00000610778 3293 ntBASIC2.03□□□□□ -2.08
DKK3Q9UBP4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.486-201ENST00000384398 107 ntBASIC2.03□□□□□ -2.08
DKK3Q9UBP4 Y_RNA.497-201ENST00000384447 98 ntBASIC2.03□□□□□ -2.08
DKK3Q9UBP4 RNU2-70P-201ENST00000410718 179 ntBASIC2.03□□□□□ -2.08
DKK3Q9UBP4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.03□□□□□ -2.08
DKK3Q9UBP4 RN7SL274P-201ENST00000492268 272 ntBASIC2.03□□□□□ -2.08
DKK3Q9UBP4 AC112693.2-201ENST00000556538 232 ntBASIC2.03□□□□□ -2.08
DKK3Q9UBP4 SUB1P4-201ENST00000566062 339 ntBASIC2.03□□□□□ -2.08
DKK3Q9UBP4 MIR5094-201ENST00000578766 85 ntBASIC2.03□□□□□ -2.08
DKK3Q9UBP4 MIR8054-201ENST00000620877 86 ntBASIC2.03□□□□□ -2.08
DKK3Q9UBP4 MIR6844-201ENST00000637122 62 ntBASIC2.03□□□□□ -2.08
DKK3Q9UBP4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
DKK3Q9UBP4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
DKK3Q9UBP4 RNU6-199P-201ENST00000362954 107 ntBASIC2.02□□□□□ -2.09
DKK3Q9UBP4 RNA5SP109-201ENST00000391010 116 ntBASIC2.02□□□□□ -2.09
DKK3Q9UBP4 SNORA75.5-201ENST00000391291 81 ntBASIC2.02□□□□□ -2.09
DKK3Q9UBP4 MIR513C-201ENST00000401352 84 ntBASIC2.02□□□□□ -2.09
DKK3Q9UBP4 RPL30P13-201ENST00000418873 348 ntBASIC2.02□□□□□ -2.09
DKK3Q9UBP4 RNU7-197P-201ENST00000458836 62 ntBASIC2.02□□□□□ -2.09
DKK3Q9UBP4 RNA5SP57-201ENST00000459463 123 ntBASIC2.02□□□□□ -2.09
DKK3Q9UBP4 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
DKK3Q9UBP4 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
DKK3Q9UBP4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.02□□□□□ -2.09
DKK3Q9UBP4 U2.22-201ENST00000636441 106 ntBASIC2.02□□□□□ -2.09
DKK3Q9UBP4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
DKK3Q9UBP4 Y_RNA.91-201ENST00000363042 107 ntBASIC2.01□□□□□ -2.09
DKK3Q9UBP4 MIR7-2-201ENST00000384970 110 ntBASIC2.01□□□□□ -2.09
DKK3Q9UBP4 U8.13-201ENST00000390842 128 ntBASIC2.01□□□□□ -2.09
DKK3Q9UBP4 SNORA12.1-201ENST00000390873 148 ntBASIC2.01□□□□□ -2.09
DKK3Q9UBP4 RNU6-440P-201ENST00000390882 105 ntBASIC2.01□□□□□ -2.09
DKK3Q9UBP4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.01□□□□□ -2.09
DKK3Q9UBP4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.01□□□□□ -2.09
DKK3Q9UBP4 RNVU1-2-201ENST00000516326 135 ntBASIC2.01□□□□□ -2.09
DKK3Q9UBP4 RNU6-365P-201ENST00000517113 106 ntBASIC2.01□□□□□ -2.09
DKK3Q9UBP4 AC120024.3-201ENST00000603167 156 ntBASIC2.01□□□□□ -2.09
DKK3Q9UBP4 SNORA28-201ENST00000606769 126 ntBASIC2.01□□□□□ -2.09
DKK3Q9UBP4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.01□□□□□ -2.09
DKK3Q9UBP4 MIR8070-201ENST00000616510 88 ntBASIC2.01□□□□□ -2.09
DKK3Q9UBP4 U1.36-201ENST00000620684 176 ntBASIC2.01□□□□□ -2.09
DKK3Q9UBP4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
DKK3Q9UBP4 MIR378A-201ENST00000362177 66 ntBASIC2□□□□□ -2.09
DKK3Q9UBP4 Y_RNA.66-201ENST00000362862 102 ntBASIC2□□□□□ -2.09
DKK3Q9UBP4 SNORA25.7-201ENST00000364375 127 ntBASIC2□□□□□ -2.09
DKK3Q9UBP4 RNU6-950P-201ENST00000384651 107 ntBASIC2□□□□□ -2.09
DKK3Q9UBP4 SNORD37.2-201ENST00000391075 66 ntBASIC2□□□□□ -2.09
DKK3Q9UBP4 RNU6-321P-201ENST00000410912 106 ntBASIC2□□□□□ -2.09
DKK3Q9UBP4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2□□□□□ -2.09
DKK3Q9UBP4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2□□□□□ -2.09
DKK3Q9UBP4 AC108667.1-201ENST00000428618 249 ntBASIC2□□□□□ -2.09
DKK3Q9UBP4 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
DKK3Q9UBP4 RNU6-426P-201ENST00000516464 97 ntBASIC2□□□□□ -2.09
DKK3Q9UBP4 RNU6-504P-201ENST00000516568 104 ntBASIC2□□□□□ -2.09
DKK3Q9UBP4 MIR3122-201ENST00000577243 73 ntBASIC2□□□□□ -2.09
DKK3Q9UBP4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2□□□□□ -2.09
DKK3Q9UBP4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2□□□□□ -2.09
DKK3Q9UBP4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
DKK3Q9UBP4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
DKK3Q9UBP4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
DKK3Q9UBP4 SNORD24-201ENST00000383884 75 ntBASIC1.99□□□□□ -2.09
DKK3Q9UBP4 SNORA19-201ENST00000384737 128 ntBASIC1.99□□□□□ -2.09
DKK3Q9UBP4 Y_RNA.586-201ENST00000391146 98 ntBASIC1.99□□□□□ -2.09
DKK3Q9UBP4 RNA5SP212-201ENST00000391223 107 ntBASIC1.99□□□□□ -2.09
DKK3Q9UBP4 RN7SKP200-201ENST00000410564 320 ntBASIC1.99□□□□□ -2.09
DKK3Q9UBP4 RNA5SP501-201ENST00000410990 112 ntBASIC1.99□□□□□ -2.09
DKK3Q9UBP4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.99□□□□□ -2.09
DKK3Q9UBP4 SNORA31.10-201ENST00000516482 106 ntBASIC1.99□□□□□ -2.09
DKK3Q9UBP4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.99□□□□□ -2.09
DKK3Q9UBP4 MIR5089-201ENST00000580047 84 ntBASIC1.99□□□□□ -2.09
DKK3Q9UBP4 AC010332.2-201ENST00000613083 1904 ntBASIC1.99□□□□□ -2.09
DKK3Q9UBP4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.98□□□□□ -2.09
DKK3Q9UBP4 SNORD68-201ENST00000363214 84 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 Y_RNA.251-201ENST00000364551 99 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 SNORD50B-201ENST00000364995 70 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 MIR583-201ENST00000384846 75 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 MIR520A-201ENST00000384862 85 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
DKK3Q9UBP4 SNORD72-201ENST00000390994 80 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 AC019129.1-201ENST00000403786 261 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 RNU6-588P-201ENST00000410281 105 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 MLLT10P1-201ENST00000418346 262 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 AL021397.1-201ENST00000451806 248 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.98□□□□□ -2.09
DKK3Q9UBP4 AC092991.1-201ENST00000477176 376 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 RNA5SP182-201ENST00000516064 82 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 AP001340.1-201ENST00000624405 217 ntBASIC1.98□□□□□ -2.09
DKK3Q9UBP4 RNU6-888P-201ENST00000363010 101 ntBASIC1.97□□□□□ -2.09
DKK3Q9UBP4 RNU6-112P-201ENST00000363599 104 ntBASIC1.97□□□□□ -2.09
DKK3Q9UBP4 RNU6-1082P-201ENST00000364574 107 ntBASIC1.97□□□□□ -2.09
DKK3Q9UBP4 snoU2-30.1-201ENST00000365012 70 ntBASIC1.97□□□□□ -2.09
DKK3Q9UBP4 Y_RNA.336-201ENST00000365307 109 ntBASIC1.97□□□□□ -2.09
DKK3Q9UBP4 RNU6-296P-201ENST00000384608 107 ntBASIC1.97□□□□□ -2.09
DKK3Q9UBP4 RNU6-257P-201ENST00000410238 98 ntBASIC1.97□□□□□ -2.09
DKK3Q9UBP4 SNORA25.12-201ENST00000516202 82 ntBASIC1.97□□□□□ -2.09
DKK3Q9UBP4 AL365205.2-201ENST00000594586 68 ntBASIC1.97□□□□□ -2.09
DKK3Q9UBP4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.97□□□□□ -2.09
DKK3Q9UBP4 AC006441.5-201ENST00000612680 209 ntBASIC1.97□□□□□ -2.09
DKK3Q9UBP4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms