Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MIR616-201ENST00000385293 97 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 SNORA17.3-201ENST00000391159 129 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 RPL30P13-201ENST00000418873 348 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 Y_RNA.797-201ENST00000515977 94 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 MIR4303-201ENST00000581299 66 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
PCDH9Q9HC56 Z83818.1-201ENST00000603584 150 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
PCDH9Q9HC56 MIR513A1-201ENST00000385138 129 ntBASIC1.49□□□□□ -2.17
PCDH9Q9HC56 RNU6-918P-201ENST00000391219 106 ntBASIC1.49□□□□□ -2.17
PCDH9Q9HC56 HSPE1P24-201ENST00000450782 238 ntBASIC1.49□□□□□ -2.17
PCDH9Q9HC56 AL138752.1-201ENST00000452964 351 ntBASIC1.49□□□□□ -2.17
PCDH9Q9HC56 snoU13.9-201ENST00000458927 103 ntBASIC1.49□□□□□ -2.17
PCDH9Q9HC56 RNU6-561P-201ENST00000516222 102 ntBASIC1.49□□□□□ -2.17
PCDH9Q9HC56 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
PCDH9Q9HC56 RNU6-794P-201ENST00000517261 64 ntBASIC1.49□□□□□ -2.17
PCDH9Q9HC56 MIR4744-201ENST00000581563 82 ntBASIC1.49□□□□□ -2.17
PCDH9Q9HC56 AC008507.4-201ENST00000585464 127 ntBASIC1.49□□□□□ -2.17
PCDH9Q9HC56 RNU6-1123P-201ENST00000362347 106 ntBASIC1.48□□□□□ -2.17
PCDH9Q9HC56 RN7SKP51-201ENST00000410781 304 ntBASIC1.48□□□□□ -2.17
PCDH9Q9HC56 AL354695.1-201ENST00000427935 228 ntBASIC1.48□□□□□ -2.17
PCDH9Q9HC56 AL121914.1-201ENST00000450188 156 ntBASIC1.48□□□□□ -2.17
PCDH9Q9HC56 AP002392.1-201ENST00000537692 208 ntBASIC1.48□□□□□ -2.17
PCDH9Q9HC56 AC027279.3-201ENST00000625055 122 ntBASIC1.48□□□□□ -2.17
PCDH9Q9HC56 RNU6-103P-201ENST00000363686 107 ntBASIC1.47□□□□□ -2.17
PCDH9Q9HC56 RNU6-442P-201ENST00000383968 104 ntBASIC1.47□□□□□ -2.17
PCDH9Q9HC56 MIR516B2-201ENST00000385190 85 ntBASIC1.47□□□□□ -2.17
PCDH9Q9HC56 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
PCDH9Q9HC56 RNU6-1228P-201ENST00000391014 107 ntBASIC1.47□□□□□ -2.17
PCDH9Q9HC56 SNRPGP8-201ENST00000454064 226 ntBASIC1.47□□□□□ -2.17
PCDH9Q9HC56 SNORA81.3-201ENST00000517283 198 ntBASIC1.47□□□□□ -2.17
PCDH9Q9HC56 AC087685.1-201ENST00000587507 141 ntBASIC1.47□□□□□ -2.17
PCDH9Q9HC56 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
PCDH9Q9HC56 MIR302D-201ENST00000362275 68 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.29-201ENST00000362570 113 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 RNU6-833P-201ENST00000363486 107 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.486-201ENST00000384398 107 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 RNU6-578P-201ENST00000390980 103 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 SNORD77.4-201ENST00000516158 81 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 RNA5SP458-201ENST00000516188 119 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 RNU6-1299P-201ENST00000516316 100 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
PCDH9Q9HC56 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.46□□□□□ -2.18
PCDH9Q9HC56 AC108706.1-201ENST00000611053 297 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 AL391903.3-201ENST00000612158 163 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 AL442644.1-201ENST00000454390 3105 ntBASIC1.46□□□□□ -2.18
PCDH9Q9HC56 RNU6-199P-201ENST00000362954 107 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 SNORD45.3-201ENST00000363836 72 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 RNU6-728P-201ENST00000365375 104 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 RNU2-70P-201ENST00000410718 179 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 HMGN2P32-201ENST00000444648 269 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 AC109810.1-201ENST00000534066 224 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 AC015688.6-201ENST00000577737 104 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 MIR3668-201ENST00000582138 75 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 FAM106DP-201ENST00000586416 501 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 AC004792.1-201ENST00000614523 137 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 U6.106-201ENST00000636360 105 ntBASIC1.45□□□□□ -2.18
PCDH9Q9HC56 U8.1-201ENST00000362843 134 ntBASIC1.44□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.121-201ENST00000363309 113 ntBASIC1.44□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.140-201ENST00000363474 103 ntBASIC1.44□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.233-201ENST00000364407 101 ntBASIC1.44□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.336-201ENST00000365307 109 ntBASIC1.44□□□□□ -2.18
PCDH9Q9HC56 RNY3P5-201ENST00000384127 102 ntBASIC1.44□□□□□ -2.18
PCDH9Q9HC56 MIR15B-201ENST00000385045 98 ntBASIC1.44□□□□□ -2.18
PCDH9Q9HC56 AC015922.2-201ENST00000435593 184 ntBASIC1.44□□□□□ -2.18
PCDH9Q9HC56 SNRPGP13-201ENST00000442212 177 ntBASIC1.44□□□□□ -2.18
PCDH9Q9HC56 RNU6-1219P-201ENST00000516143 112 ntBASIC1.44□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.666-201ENST00000516187 112 ntBASIC1.44□□□□□ -2.18
PCDH9Q9HC56 RNU6-861P-201ENST00000516745 106 ntBASIC1.44□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.91-201ENST00000363042 107 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 RNU6-268P-201ENST00000364174 107 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 SNORD1A-201ENST00000364968 72 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 RNU6-1138P-201ENST00000365359 106 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.412-201ENST00000384001 104 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.432-201ENST00000384087 111 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 SNORD38C-201ENST00000384381 69 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 MIR526A1-201ENST00000384897 85 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 SNORA79-201ENST00000408376 140 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 RNU4-62P-201ENST00000410125 130 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 AC108667.1-201ENST00000428618 249 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 AC092991.1-201ENST00000477176 376 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 RNU6-182P-201ENST00000516970 105 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 AC090142.3-201ENST00000519012 385 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 AP001485.1-201ENST00000604799 199 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 AL365434.2-201ENST00000607979 234 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 AC015726.2-201ENST00000620112 122 ntBASIC1.43□□□□□ -2.18
PCDH9Q9HC56 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
PCDH9Q9HC56 MIR452-201ENST00000385020 85 ntBASIC1.42□□□□□ -2.18
PCDH9Q9HC56 MIR758-201ENST00000390227 88 ntBASIC1.42□□□□□ -2.18
PCDH9Q9HC56 SNRPGP14-201ENST00000435400 219 ntBASIC1.42□□□□□ -2.18
PCDH9Q9HC56 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.42□□□□□ -2.18
PCDH9Q9HC56 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
PCDH9Q9HC56 AC079140.2-201ENST00000506193 142 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms