Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PIGPP3-201ENST00000425307 415 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 AL603825.1-201ENST00000438481 80 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 SNORD77.4-201ENST00000516158 81 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 RNU7-28P-201ENST00000516759 62 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 MIR4422-201ENST00000581938 83 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 AC008507.4-201ENST00000585464 127 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 Z83818.1-201ENST00000603584 150 ntBASIC1.48□□□□□ -2.17
UPF2Q9HAU5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
UPF2Q9HAU5 Y_RNA.238-201ENST00000364441 102 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 SNORA40.6-201ENST00000391153 128 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 RNA5SP496-201ENST00000391240 109 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 PCNPP3-201ENST00000393579 471 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.47□□□□□ -2.17
UPF2Q9HAU5 AC093850.1-201ENST00000454121 251 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 RPS29P29-201ENST00000456396 171 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 AC114811.1-201ENST00000507207 168 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 RNU6-1219P-201ENST00000516143 112 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 SNORA81.3-201ENST00000517283 198 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 AC108706.1-201ENST00000611053 297 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 AL391903.3-201ENST00000612158 163 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 AC004792.1-201ENST00000614523 137 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 uc_338.4-201ENST00000616635 176 ntBASIC1.47□□□□□ -2.17
UPF2Q9HAU5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
UPF2Q9HAU5 MIR26B-201ENST00000362251 77 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 MIR302D-201ENST00000362275 68 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.412-201ENST00000384001 104 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 AL606845.1-201ENST00000404881 255 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 AL034345.1-201ENST00000407768 123 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 MLLT10P1-201ENST00000418346 262 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 JTBP1-201ENST00000441314 247 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 PGBD4P5-201ENST00000445958 426 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 SNRPGP8-201ENST00000454064 226 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 AC074198.2-201ENST00000508153 258 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.46□□□□□ -2.18
UPF2Q9HAU5 RN7SKP164-201ENST00000516138 266 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 MIR4778-201ENST00000577635 80 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 AC120024.3-201ENST00000603167 156 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 AP001485.1-201ENST00000604799 199 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 MIR8063-201ENST00000621930 81 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 U6.106-201ENST00000636360 105 ntBASIC1.46□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.7-201ENST00000362352 102 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 RNU6-1020P-201ENST00000363684 107 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.233-201ENST00000364407 101 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 MIR526A1-201ENST00000384897 85 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 MIR660-201ENST00000385235 97 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.587-201ENST00000391210 103 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 AC004965.1-201ENST00000413033 213 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 RPL30P13-201ENST00000418873 348 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 AL591704.2-201ENST00000421658 181 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 MTND5P15-201ENST00000434246 349 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 RNU7-120P-201ENST00000459334 63 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.45□□□□□ -2.18
UPF2Q9HAU5 RNU6-1007P-201ENST00000516586 107 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 SNORD45.4-201ENST00000516629 73 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 RNU7-149P-201ENST00000516739 59 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.45□□□□□ -2.18
UPF2Q9HAU5 AC015688.6-201ENST00000577737 104 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 MIR2681-201ENST00000581814 105 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 MIR3660-201ENST00000584845 100 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 SNORA28-201ENST00000606769 126 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 AL513423.1-201ENST00000621695 132 ntBASIC1.45□□□□□ -2.18
UPF2Q9HAU5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
UPF2Q9HAU5 RNU6-1138P-201ENST00000365359 106 ntBASIC1.44□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.486-201ENST00000384398 107 ntBASIC1.44□□□□□ -2.18
UPF2Q9HAU5 RNU6-950P-201ENST00000384651 107 ntBASIC1.44□□□□□ -2.18
UPF2Q9HAU5 RNU6-578P-201ENST00000390980 103 ntBASIC1.44□□□□□ -2.18
UPF2Q9HAU5 RNU6-131P-201ENST00000391144 107 ntBASIC1.44□□□□□ -2.18
UPF2Q9HAU5 RNU5E-9P-201ENST00000411164 104 ntBASIC1.44□□□□□ -2.18
UPF2Q9HAU5 BTF3P4-201ENST00000418852 495 ntBASIC1.44□□□□□ -2.18
UPF2Q9HAU5 RNU6-861P-201ENST00000516745 106 ntBASIC1.44□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.700-201ENST00000516806 100 ntBASIC1.44□□□□□ -2.18
UPF2Q9HAU5 AC109810.1-201ENST00000534066 224 ntBASIC1.44□□□□□ -2.18
UPF2Q9HAU5 JPX_2.1-201ENST00000614161 69 ntBASIC1.44□□□□□ -2.18
UPF2Q9HAU5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
UPF2Q9HAU5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.44□□□□□ -2.18
UPF2Q9HAU5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
UPF2Q9HAU5 ICE2P2-201ENST00000483823 2787 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
UPF2Q9HAU5 MIR378A-201ENST00000362177 66 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.29-201ENST00000362570 113 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.91-201ENST00000363042 107 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.121-201ENST00000363309 113 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 SNORD45.3-201ENST00000363836 72 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 MIR548A2-201ENST00000384956 97 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 RNU6-1228P-201ENST00000391014 107 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 RNU1-78P-201ENST00000391248 165 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.622-201ENST00000411091 108 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 CYCTP-201ENST00000504253 315 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 SUMO2P16-201ENST00000519475 264 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 AP002392.1-201ENST00000537692 208 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.43□□□□□ -2.18
UPF2Q9HAU5 MIR4744-201ENST00000581563 82 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 AL512598.1-201ENST00000610158 273 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 AC027279.3-201ENST00000625055 122 ntBASIC1.43□□□□□ -2.18
UPF2Q9HAU5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
UPF2Q9HAU5 RNU6-1123P-201ENST00000362347 106 ntBASIC1.42□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.66-201ENST00000362862 102 ntBASIC1.42□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.75-201ENST00000362927 97 ntBASIC1.42□□□□□ -2.18
UPF2Q9HAU5 RNU6-833P-201ENST00000363486 107 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms