Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 AC003685.2-201ENST00000422795 395 ntBASIC6.01□□□□□ -1.45
SENP3Q9H4L4 Z74021.1-201ENST00000423610 407 ntBASIC6.01□□□□□ -1.45
SENP3Q9H4L4 uc_338.6-201ENST00000613544 171 ntBASIC6.01□□□□□ -1.45
SENP3Q9H4L4 AC091905.2-201ENST00000623143 306 ntBASIC6.01□□□□□ -1.45
SENP3Q9H4L4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SENP3Q9H4L4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SENP3Q9H4L4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6□□□□□ -1.45
SENP3Q9H4L4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
SENP3Q9H4L4 SNORA5.1-201ENST00000384275 131 ntBASIC6□□□□□ -1.45
SENP3Q9H4L4 MIR548C-201ENST00000384815 97 ntBASIC6□□□□□ -1.45
SENP3Q9H4L4 MIR30B-201ENST00000384850 88 ntBASIC6□□□□□ -1.45
SENP3Q9H4L4 MIR7-2-201ENST00000384970 110 ntBASIC6□□□□□ -1.45
SENP3Q9H4L4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC6□□□□□ -1.45
SENP3Q9H4L4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC6□□□□□ -1.45
SENP3Q9H4L4 RNA5SP48-201ENST00000363969 126 ntBASIC5.99□□□□□ -1.45
SENP3Q9H4L4 Y_RNA.500-201ENST00000384466 111 ntBASIC5.99□□□□□ -1.45
SENP3Q9H4L4 SNORD113-2-201ENST00000391082 72 ntBASIC5.99□□□□□ -1.45
SENP3Q9H4L4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC5.99□□□□□ -1.45
SENP3Q9H4L4 UBE2DNL-203ENST00000474922 222 ntBASIC5.99□□□□□ -1.45
SENP3Q9H4L4 RNU6-287P-201ENST00000516230 98 ntBASIC5.99□□□□□ -1.45
SENP3Q9H4L4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SENP3Q9H4L4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SENP3Q9H4L4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SENP3Q9H4L4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SENP3Q9H4L4 RNU6-396P-201ENST00000365369 105 ntBASIC5.98□□□□□ -1.45
SENP3Q9H4L4 SNORA5A-201ENST00000384111 134 ntBASIC5.98□□□□□ -1.45
SENP3Q9H4L4 MIR183-201ENST00000384958 110 ntBASIC5.98□□□□□ -1.45
SENP3Q9H4L4 RNU1-95P-201ENST00000516357 160 ntBASIC5.98□□□□□ -1.45
SENP3Q9H4L4 RNU1-128P-201ENST00000516704 160 ntBASIC5.98□□□□□ -1.45
SENP3Q9H4L4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.98□□□□□ -1.45
SENP3Q9H4L4 MIR4513-201ENST00000581077 86 ntBASIC5.98□□□□□ -1.45
SENP3Q9H4L4 MIR3922-201ENST00000585192 84 ntBASIC5.98□□□□□ -1.45
SENP3Q9H4L4 U6.105-201ENST00000637379 88 ntBASIC5.98□□□□□ -1.45
SENP3Q9H4L4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.98□□□□□ -1.45
SENP3Q9H4L4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SENP3Q9H4L4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.97□□□□□ -1.45
SENP3Q9H4L4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SENP3Q9H4L4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SENP3Q9H4L4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SENP3Q9H4L4 RNA5SP446-201ENST00000515955 82 ntBASIC5.97□□□□□ -1.45
SENP3Q9H4L4 RNA5SP437-201ENST00000517249 129 ntBASIC5.97□□□□□ -1.45
SENP3Q9H4L4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.96□□□□□ -1.45
SENP3Q9H4L4 SNORD66.1-201ENST00000391230 76 ntBASIC5.96□□□□□ -1.46
SENP3Q9H4L4 MIR1911-201ENST00000410783 80 ntBASIC5.96□□□□□ -1.46
SENP3Q9H4L4 RPS29P4-201ENST00000414733 161 ntBASIC5.96□□□□□ -1.46
SENP3Q9H4L4 SNORA71B-202ENST00000439232 272 ntBASIC5.96□□□□□ -1.46
SENP3Q9H4L4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SENP3Q9H4L4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SENP3Q9H4L4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SENP3Q9H4L4 MAPK10-320ENST00000641462 6696 ntBASIC5.95□□□□□ -1.46
SENP3Q9H4L4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SENP3Q9H4L4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
SENP3Q9H4L4 MIR520A-201ENST00000384862 85 ntBASIC5.95□□□□□ -1.46
SENP3Q9H4L4 RNA5SP73-201ENST00000516744 108 ntBASIC5.95□□□□□ -1.46
SENP3Q9H4L4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.95□□□□□ -1.46
SENP3Q9H4L4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SENP3Q9H4L4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SENP3Q9H4L4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SENP3Q9H4L4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
SENP3Q9H4L4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.94□□□□□ -1.46
SENP3Q9H4L4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SENP3Q9H4L4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SENP3Q9H4L4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SENP3Q9H4L4 SNORA68.1-201ENST00000364537 132 ntBASIC5.94□□□□□ -1.46
SENP3Q9H4L4 RNU1-36P-201ENST00000365130 165 ntBASIC5.94□□□□□ -1.46
SENP3Q9H4L4 RNU6-260P-201ENST00000384092 107 ntBASIC5.94□□□□□ -1.46
SENP3Q9H4L4 snoU13.27-201ENST00000459278 104 ntBASIC5.94□□□□□ -1.46
SENP3Q9H4L4 AC025033.1-201ENST00000463883 194 ntBASIC5.94□□□□□ -1.46
SENP3Q9H4L4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SENP3Q9H4L4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SENP3Q9H4L4 AC087190.4-201ENST00000574616 8334 ntBASIC5.94□□□□□ -1.46
SENP3Q9H4L4 AC006011.1-201ENST00000442758 349 ntBASIC5.93□□□□□ -1.46
SENP3Q9H4L4 AP000942.3-201ENST00000603702 160 ntBASIC5.93□□□□□ -1.46
SENP3Q9H4L4 AL449363.1-201ENST00000617815 186 ntBASIC5.93□□□□□ -1.46
SENP3Q9H4L4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SENP3Q9H4L4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.93□□□□□ -1.46
SENP3Q9H4L4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.93□□□□□ -1.46
SENP3Q9H4L4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SENP3Q9H4L4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SENP3Q9H4L4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SENP3Q9H4L4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SENP3Q9H4L4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.92□□□□□ -1.46
SENP3Q9H4L4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SENP3Q9H4L4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
SENP3Q9H4L4 RNU6-220P-201ENST00000390919 107 ntBASIC5.92□□□□□ -1.46
SENP3Q9H4L4 SNORA57.3-201ENST00000411095 141 ntBASIC5.92□□□□□ -1.46
SENP3Q9H4L4 TRBV12-2-201ENST00000489763 344 ntBASIC5.92□□□□□ -1.46
SENP3Q9H4L4 MIR548X-201ENST00000580069 75 ntBASIC5.92□□□□□ -1.46
SENP3Q9H4L4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.92□□□□□ -1.46
SENP3Q9H4L4 MIR7151-201ENST00000617477 60 ntBASIC5.92□□□□□ -1.46
SENP3Q9H4L4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SENP3Q9H4L4 MAPK10-349ENST00000641767 3661 ntBASIC5.91□□□□□ -1.46
SENP3Q9H4L4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SENP3Q9H4L4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SENP3Q9H4L4 MIR6868-201ENST00000611215 58 ntBASIC5.91□□□□□ -1.46
SENP3Q9H4L4 MIR3651-201ENST00000630427 90 ntBASIC5.91□□□□□ -1.46
SENP3Q9H4L4 AP001486.2-201ENST00000561652 5113 ntBASIC5.91□□□□□ -1.46
SENP3Q9H4L4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SENP3Q9H4L4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC5.91□□□□□ -1.46
SENP3Q9H4L4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms