Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR592-201ENST00000384959 97 ntBASIC3.22□□□□□ -1.89
COL25A1Q9BXS0 AC087499.2-201ENST00000432861 149 ntBASIC3.22□□□□□ -1.89
COL25A1Q9BXS0 AC009969.1-201ENST00000438726 172 ntBASIC3.22□□□□□ -1.89
COL25A1Q9BXS0 RNU7-94P-201ENST00000459576 63 ntBASIC3.22□□□□□ -1.89
COL25A1Q9BXS0 RPPH1-2P-201ENST00000516688 293 ntBASIC3.22□□□□□ -1.89
COL25A1Q9BXS0 SNORA31.21-201ENST00000517180 77 ntBASIC3.22□□□□□ -1.89
COL25A1Q9BXS0 U6.98-201ENST00000637157 84 ntBASIC3.22□□□□□ -1.89
COL25A1Q9BXS0 MIR622-201ENST00000638396 96 ntBASIC3.22□□□□□ -1.89
COL25A1Q9BXS0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL25A1Q9BXS0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL25A1Q9BXS0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
COL25A1Q9BXS0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.89
COL25A1Q9BXS0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
COL25A1Q9BXS0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL25A1Q9BXS0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.21□□□□□ -1.9
COL25A1Q9BXS0 RNU6-1094P-201ENST00000362416 104 ntBASIC3.21□□□□□ -1.9
COL25A1Q9BXS0 SNORA22.1-201ENST00000362701 134 ntBASIC3.21□□□□□ -1.9
COL25A1Q9BXS0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.21□□□□□ -1.9
COL25A1Q9BXS0 AC114811.1-201ENST00000507207 168 ntBASIC3.21□□□□□ -1.9
COL25A1Q9BXS0 MIR4648-201ENST00000580107 72 ntBASIC3.21□□□□□ -1.9
COL25A1Q9BXS0 MIR486-1-201ENST00000612171 68 ntBASIC3.21□□□□□ -1.9
COL25A1Q9BXS0 CTSLP2-204ENST00000629029 392 ntBASIC3.21□□□□□ -1.9
COL25A1Q9BXS0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL25A1Q9BXS0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL25A1Q9BXS0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.21□□□□□ -1.9
COL25A1Q9BXS0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL25A1Q9BXS0 RNU7-2P-201ENST00000516096 62 ntBASIC3.2□□□□□ -1.9
COL25A1Q9BXS0 RNU6-1041P-201ENST00000516254 102 ntBASIC3.2□□□□□ -1.9
COL25A1Q9BXS0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL25A1Q9BXS0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 MAPK10-253ENST00000641010 4072 ntBASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 Y_RNA.567-201ENST00000384736 106 ntBASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 RNA5SP252-201ENST00000391131 119 ntBASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 SNORA40.18-201ENST00000391200 128 ntBASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 RNA5SP38-201ENST00000410750 119 ntBASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 HMGN2P23-201ENST00000456759 269 ntBASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 RN7SL499P-201ENST00000481141 276 ntBASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 uc_338.25-201ENST00000613756 156 ntBASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 AC244205.2-202ENST00000635781 342 ntBASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.19□□□□□ -1.9
COL25A1Q9BXS0 AL442644.1-201ENST00000454390 3105 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 RNU1-70P-201ENST00000362618 164 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 RNA5SP68-201ENST00000363885 119 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 SNORA32-201ENST00000384072 121 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 SNORA8-201ENST00000384574 139 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 RNU7-170P-201ENST00000459303 61 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 RNU7-34P-201ENST00000459394 64 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 RNU6-917P-201ENST00000516294 104 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 AC007536.1-201ENST00000533382 349 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 AC026333.2-201ENST00000542164 106 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 AL513043.2-201ENST00000573941 143 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 MIR3134-201ENST00000579433 74 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 MIR3152-201ENST00000579801 74 ntBASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL25A1Q9BXS0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 MIR22-201ENST00000362190 85 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 RNA5SP295-201ENST00000362655 121 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 SNORA25.6-201ENST00000364121 118 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 SNORD15B-201ENST00000384714 146 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 RNU6-1307P-201ENST00000391012 103 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 RNA5SP323-201ENST00000391094 133 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 RNA5SP482-201ENST00000391269 118 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 RNU2-63P-201ENST00000410792 194 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 RNU1-98P-201ENST00000458992 160 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 SNORA25.13-201ENST00000516395 103 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 RNU7-153P-201ENST00000516455 62 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 IGLV3-17-201ENST00000519099 244 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 MIR4498-201ENST00000577599 66 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 MIR6817-201ENST00000615588 66 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 U7.8-201ENST00000619968 63 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 IPO8P1-201ENST00000455509 3109 ntBASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL25A1Q9BXS0 RNU6-624P-201ENST00000363411 107 ntBASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 MIR34C-201ENST00000384831 77 ntBASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 MIR518E-201ENST00000385252 88 ntBASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 SNORA26.6-201ENST00000391256 115 ntBASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 ARF4P2-201ENST00000430209 526 ntBASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 AC025554.1-201ENST00000505641 188 ntBASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 SNORA31.1-201ENST00000515993 133 ntBASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 SNORA31.5-201ENST00000516190 133 ntBASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 AC020891.4-201ENST00000605745 93 ntBASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL25A1Q9BXS0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
COL25A1Q9BXS0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
COL25A1Q9BXS0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
COL25A1Q9BXS0 RNU6-987P-201ENST00000384759 104 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms