Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNU7-193P-201ENST00000516723 65 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 AC120024.3-201ENST00000603167 156 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 uc_338.28-201ENST00000612082 187 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 MTND5P18-201ENST00000445624 1801 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SALL3Q9BXA9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SALL3Q9BXA9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SALL3Q9BXA9 RNU6-1082P-201ENST00000364574 107 ntBASIC2.27□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.280-201ENST00000364765 112 ntBASIC2.27□□□□□ -2.05
SALL3Q9BXA9 SNORD48-201ENST00000364953 64 ntBASIC2.27□□□□□ -2.05
SALL3Q9BXA9 MIR562-201ENST00000384894 95 ntBASIC2.27□□□□□ -2.05
SALL3Q9BXA9 CYCSP49-201ENST00000420810 319 ntBASIC2.27□□□□□ -2.05
SALL3Q9BXA9 RNU1-131P-201ENST00000458943 161 ntBASIC2.27□□□□□ -2.05
SALL3Q9BXA9 AC018868.1-201ENST00000491307 315 ntBASIC2.27□□□□□ -2.05
SALL3Q9BXA9 RNA5SP445-201ENST00000515889 115 ntBASIC2.27□□□□□ -2.05
SALL3Q9BXA9 RPL23AP91-201ENST00000569211 455 ntBASIC2.27□□□□□ -2.05
SALL3Q9BXA9 AL049861.1-201ENST00000603130 150 ntBASIC2.27□□□□□ -2.05
SALL3Q9BXA9 AL353149.1-201ENST00000610667 244 ntBASIC2.27□□□□□ -2.05
SALL3Q9BXA9 AC011603.4-201ENST00000611325 277 ntBASIC2.27□□□□□ -2.05
SALL3Q9BXA9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
SALL3Q9BXA9 RNU6-228P-201ENST00000362700 106 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 RNU6-1209P-201ENST00000363655 107 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 RNU6-743P-201ENST00000364151 106 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.221-201ENST00000364248 96 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.584-201ENST00000391090 114 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.651-201ENST00000459380 103 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 AC011406.1-201ENST00000512440 370 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 RNU6-772P-201ENST00000516042 105 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 RN7SKP179-201ENST00000516126 217 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.677-201ENST00000516401 85 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 RNU2-56P-201ENST00000516826 190 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 AC090142.3-201ENST00000519012 385 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 AL358944.1-201ENST00000528537 144 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 MIR4448-201ENST00000584360 86 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 AC007229.1-201ENST00000590455 412 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 AL031274.2-201ENST00000599419 203 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.26□□□□□ -2.05
SALL3Q9BXA9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.26□□□□□ -2.05
SALL3Q9BXA9 AC015726.2-201ENST00000620112 122 ntBASIC2.26□□□□□ -2.05
SALL3Q9BXA9 snoU2-30.2-201ENST00000362805 70 ntBASIC2.25□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.634-201ENST00000364811 113 ntBASIC2.25□□□□□ -2.05
SALL3Q9BXA9 SNORA51.10-201ENST00000384418 136 ntBASIC2.25□□□□□ -2.05
SALL3Q9BXA9 U8.13-201ENST00000390842 128 ntBASIC2.25□□□□□ -2.05
SALL3Q9BXA9 HMGN2P34-201ENST00000437647 269 ntBASIC2.25□□□□□ -2.05
SALL3Q9BXA9 OR9P1P-201ENST00000496431 281 ntBASIC2.25□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.685-201ENST00000516532 108 ntBASIC2.25□□□□□ -2.05
SALL3Q9BXA9 RNU6-537P-201ENST00000517277 103 ntBASIC2.25□□□□□ -2.05
SALL3Q9BXA9 AC091178.2-201ENST00000584401 117 ntBASIC2.25□□□□□ -2.05
SALL3Q9BXA9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.25□□□□□ -2.05
SALL3Q9BXA9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.25□□□□□ -2.05
SALL3Q9BXA9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
SALL3Q9BXA9 AC018630.2-201ENST00000534866 2403 ntBASIC2.25□□□□□ -2.05
SALL3Q9BXA9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.99-201ENST00000363138 105 ntBASIC2.24□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.120-201ENST00000363304 110 ntBASIC2.24□□□□□ -2.05
SALL3Q9BXA9 SNORA6-201ENST00000384033 151 ntBASIC2.24□□□□□ -2.05
SALL3Q9BXA9 RNU6-106P-201ENST00000384405 107 ntBASIC2.24□□□□□ -2.05
SALL3Q9BXA9 RNY1P7-201ENST00000384743 110 ntBASIC2.24□□□□□ -2.05
SALL3Q9BXA9 RNU6-554P-201ENST00000410466 106 ntBASIC2.24□□□□□ -2.05
SALL3Q9BXA9 RNU2-70P-201ENST00000410718 179 ntBASIC2.24□□□□□ -2.05
SALL3Q9BXA9 RNU6-667P-201ENST00000517186 102 ntBASIC2.24□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.757-201ENST00000578934 114 ntBASIC2.24□□□□□ -2.05
SALL3Q9BXA9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SALL3Q9BXA9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
SALL3Q9BXA9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
SALL3Q9BXA9 RNU6-508P-201ENST00000363231 103 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.242-201ENST00000364473 110 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 SNORA25B-201ENST00000365507 128 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 RNU6-32P-201ENST00000383948 107 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 RNU6-13P-201ENST00000384248 107 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 RNU6-1152P-201ENST00000384576 107 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 RNU6-12P-201ENST00000384604 107 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 RNU6-813P-201ENST00000384691 107 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 RNU6-41P-201ENST00000384741 107 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 SNORD78.1-201ENST00000390866 65 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 SNORA26.9-201ENST00000391322 122 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 RNU6-1096P-201ENST00000517089 102 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 RNU7-128P-201ENST00000517247 62 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 AC090049.2-201ENST00000550377 109 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.23□□□□□ -2.05
SALL3Q9BXA9 AC131055.1-201ENST00000584626 316 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 AL359075.3-201ENST00000613288 217 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 Pinc.1-201ENST00000616452 154 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 MIR338-201ENST00000636369 67 ntBASIC2.23□□□□□ -2.05
SALL3Q9BXA9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SALL3Q9BXA9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.23□□□□□ -2.05
SALL3Q9BXA9 RNY1P10-201ENST00000363268 113 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 RNU6-915P-201ENST00000364943 103 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.355-201ENST00000365462 98 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 MIR515-2-201ENST00000384883 83 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 MIR515-1-201ENST00000384884 83 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 MIR518E-201ENST00000385252 88 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 RPS29P24-201ENST00000486345 171 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 Y_RNA.692-201ENST00000516627 105 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 RNU7-149P-201ENST00000516739 59 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 RNU6-295P-201ENST00000516901 104 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 RNU6-341P-201ENST00000516973 96 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms