Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 SNORA31.10-201ENST00000516482 106 ntBASIC1.42□□□□□ -2.18
PKP2Q99959 RNU6-453P-201ENST00000516819 85 ntBASIC1.42□□□□□ -2.18
PKP2Q99959 AC072026.1-201ENST00000605023 201 ntBASIC1.42□□□□□ -2.18
PKP2Q99959 AC098479.1-201ENST00000609225 154 ntBASIC1.42□□□□□ -2.18
PKP2Q99959 AL021707.8-201ENST00000609428 183 ntBASIC1.42□□□□□ -2.18
PKP2Q99959 MIR6504-201ENST00000613520 61 ntBASIC1.42□□□□□ -2.18
PKP2Q99959 FTX_2.1-201ENST00000618816 94 ntBASIC1.42□□□□□ -2.18
PKP2Q99959 MIR8054-201ENST00000620877 86 ntBASIC1.42□□□□□ -2.18
PKP2Q99959 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
PKP2Q99959 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PKP2Q99959 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
PKP2Q99959 Y_RNA.121-201ENST00000363309 113 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 RNU6-1209P-201ENST00000363655 107 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 RNU6-682P-201ENST00000363843 106 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 Y_RNA.191-201ENST00000363972 113 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 RNU4-41P-201ENST00000364426 143 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 Y_RNA.253-201ENST00000364562 112 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 SNORA4.2-201ENST00000365313 147 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 RNA5SP496-201ENST00000391240 109 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 AC004965.1-201ENST00000413033 213 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.41□□□□□ -2.18
PKP2Q99959 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.41□□□□□ -2.18
PKP2Q99959 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 RNU7-34P-201ENST00000459394 64 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 AL049830.1-201ENST00000468034 425 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.41□□□□□ -2.18
PKP2Q99959 AC099513.1-201ENST00000490423 301 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 HMGN1P7-201ENST00000491722 313 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 RNU2-56P-201ENST00000516826 190 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 AC015688.6-201ENST00000577737 104 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 MIR2681-201ENST00000581814 105 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 RNU2-4P-201ENST00000606190 192 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 MIR502-201ENST00000606349 86 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
PKP2Q99959 RNU6-103P-201ENST00000363686 107 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 SNORA12.1-201ENST00000390873 148 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 RNU6-440P-201ENST00000390882 105 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.4□□□□□ -2.19
PKP2Q99959 RPS27P16-201ENST00000425758 201 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 AC009474.2-201ENST00000451383 136 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 AC245047.8-201ENST00000456455 284 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 SNORD11-201ENST00000459124 84 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 RNU7-95P-201ENST00000459222 64 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 RNU6-1219P-201ENST00000516143 112 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 RNA5SP220-201ENST00000516298 104 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 RPL23AP91-201ENST00000569211 455 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 AL391903.3-201ENST00000612158 163 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 AL591926.4-201ENST00000616895 298 ntBASIC1.4□□□□□ -2.19
PKP2Q99959 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
PKP2Q99959 RNU6-1065P-201ENST00000384513 106 ntBASIC1.39□□□□□ -2.19
PKP2Q99959 RNU4-70P-201ENST00000384579 139 ntBASIC1.39□□□□□ -2.19
PKP2Q99959 RNU6-950P-201ENST00000384651 107 ntBASIC1.39□□□□□ -2.19
PKP2Q99959 MIR194-1-201ENST00000384892 85 ntBASIC1.39□□□□□ -2.19
PKP2Q99959 MT-TT-201ENST00000387460 66 ntBASIC1.39□□□□□ -2.19
PKP2Q99959 MIR548I3-201ENST00000408378 149 ntBASIC1.39□□□□□ -2.19
PKP2Q99959 MIR548I1-201ENST00000408810 149 ntBASIC1.39□□□□□ -2.19
PKP2Q99959 SNRPGP10-201ENST00000432323 225 ntBASIC1.39□□□□□ -2.19
PKP2Q99959 RNU6-861P-201ENST00000516745 106 ntBASIC1.39□□□□□ -2.19
PKP2Q99959 MIR4255-201ENST00000579351 72 ntBASIC1.39□□□□□ -2.19
PKP2Q99959 MIR4744-201ENST00000581563 82 ntBASIC1.39□□□□□ -2.19
PKP2Q99959 JPX_2.1-201ENST00000614161 69 ntBASIC1.39□□□□□ -2.19
PKP2Q99959 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.39□□□□□ -2.19
PKP2Q99959 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
PKP2Q99959 Y_RNA.150-201ENST00000363562 102 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 Y_RNA.182-201ENST00000363880 111 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 Y_RNA.240-201ENST00000364469 95 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 Y_RNA.265-201ENST00000364677 108 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 Y_RNA.412-201ENST00000384001 104 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 Y_RNA.555-201ENST00000384673 110 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 RNU6-578P-201ENST00000390980 103 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 RNU6-1228P-201ENST00000391014 107 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 RNA5SP482-201ENST00000391269 118 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 AL606845.1-201ENST00000404881 255 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 RPL30P13-201ENST00000418873 348 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 STAG3L5P-204ENST00000443759 179 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 NDUFA4P2-201ENST00000489989 244 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 OR9P1P-201ENST00000496431 281 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 RNU6-1007P-201ENST00000516586 107 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 RNU7-28P-201ENST00000516759 62 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.38□□□□□ -2.19
PKP2Q99959 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.38□□□□□ -2.19
PKP2Q99959 MIR4452-201ENST00000583004 71 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 AC108706.1-201ENST00000611053 297 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.38□□□□□ -2.19
PKP2Q99959 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.38□□□□□ -2.19
PKP2Q99959 Y_RNA.75-201ENST00000362927 97 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 RNA5SP325-201ENST00000363756 130 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 U8.5-201ENST00000364528 136 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 Y_RNA.270-201ENST00000364693 104 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 RNY3P5-201ENST00000384127 102 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 RNU6-886P-201ENST00000384319 105 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 MIR522-201ENST00000385071 87 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 Y_RNA.587-201ENST00000391210 103 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 PCNPP3-201ENST00000393579 471 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 MIR1323-201ENST00000408090 73 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 RN7SKP200-201ENST00000410564 320 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.37□□□□□ -2.19
PKP2Q99959 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.37□□□□□ -2.19
PKP2Q99959 AC074198.2-201ENST00000508153 258 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms