Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 Y_RNA.486-201ENST00000384398 107 ntBASIC1.58□□□□□ -2.16
NPAS1Q99742 SNORA26-201ENST00000391286 122 ntBASIC1.58□□□□□ -2.16
NPAS1Q99742 MIR934-201ENST00000401241 83 ntBASIC1.58□□□□□ -2.16
NPAS1Q99742 AL591806.2-201ENST00000433122 173 ntBASIC1.58□□□□□ -2.16
NPAS1Q99742 AC092991.1-201ENST00000477176 376 ntBASIC1.58□□□□□ -2.16
NPAS1Q99742 SNORD77.4-201ENST00000516158 81 ntBASIC1.58□□□□□ -2.16
NPAS1Q99742 RNU6-922P-201ENST00000516753 99 ntBASIC1.58□□□□□ -2.16
NPAS1Q99742 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
NPAS1Q99742 RNU6-268P-201ENST00000364174 107 ntBASIC1.57□□□□□ -2.16
NPAS1Q99742 RNU6-47P-201ENST00000383866 107 ntBASIC1.57□□□□□ -2.16
NPAS1Q99742 RNU6-578P-201ENST00000390980 103 ntBASIC1.57□□□□□ -2.16
NPAS1Q99742 AL627390.1-201ENST00000396055 340 ntBASIC1.57□□□□□ -2.16
NPAS1Q99742 SNRPGP8-201ENST00000454064 226 ntBASIC1.57□□□□□ -2.16
NPAS1Q99742 RNU6-947P-201ENST00000516264 106 ntBASIC1.57□□□□□ -2.16
NPAS1Q99742 RNU6-250P-201ENST00000516958 103 ntBASIC1.57□□□□□ -2.16
NPAS1Q99742 AP002392.1-201ENST00000537692 208 ntBASIC1.57□□□□□ -2.16
NPAS1Q99742 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
NPAS1Q99742 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
NPAS1Q99742 Y_RNA.29-201ENST00000362570 113 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 Y_RNA.121-201ENST00000363309 113 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 RNU6-997P-201ENST00000384725 107 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 MIR504-201ENST00000385065 83 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 RNU1-78P-201ENST00000391248 165 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 SNORA26.9-201ENST00000391322 122 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 RNU2-55P-201ENST00000411146 174 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 Y_RNA.666-201ENST00000516187 112 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 RNU6-917P-201ENST00000516294 104 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 SNORA18.7-201ENST00000516910 131 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 AC090142.3-201ENST00000519012 385 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
NPAS1Q99742 AP001485.1-201ENST00000604799 199 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 MIR7843-201ENST00000622274 79 ntBASIC1.56□□□□□ -2.16
NPAS1Q99742 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.56□□□□□ -2.16
NPAS1Q99742 SNORD45.3-201ENST00000363836 72 ntBASIC1.55□□□□□ -2.16
NPAS1Q99742 MIR15B-201ENST00000385045 98 ntBASIC1.55□□□□□ -2.16
NPAS1Q99742 RNU6-918P-201ENST00000391219 106 ntBASIC1.55□□□□□ -2.16
NPAS1Q99742 AC022559.1-201ENST00000520905 205 ntBASIC1.55□□□□□ -2.16
NPAS1Q99742 AC109810.1-201ENST00000534066 224 ntBASIC1.55□□□□□ -2.16
NPAS1Q99742 CBX3P4-201ENST00000538909 354 ntBASIC1.55□□□□□ -2.16
NPAS1Q99742 AC090049.2-201ENST00000550377 109 ntBASIC1.55□□□□□ -2.16
NPAS1Q99742 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
NPAS1Q99742 AL513534.2-201ENST00000603836 250 ntBASIC1.55□□□□□ -2.16
NPAS1Q99742 MIR6715A-201ENST00000615929 79 ntBASIC1.55□□□□□ -2.16
NPAS1Q99742 MIR526A1-201ENST00000384897 85 ntBASIC1.54□□□□□ -2.16
NPAS1Q99742 RNU6-693P-201ENST00000516134 107 ntBASIC1.54□□□□□ -2.16
NPAS1Q99742 RNU6-561P-201ENST00000516222 102 ntBASIC1.54□□□□□ -2.16
NPAS1Q99742 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
NPAS1Q99742 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.54□□□□□ -2.16
NPAS1Q99742 RNU6-504P-201ENST00000516568 104 ntBASIC1.54□□□□□ -2.16
NPAS1Q99742 SNORA81.3-201ENST00000517283 198 ntBASIC1.54□□□□□ -2.16
NPAS1Q99742 AC108706.1-201ENST00000611053 297 ntBASIC1.54□□□□□ -2.16
NPAS1Q99742 AC108059.2-201ENST00000434626 151 ntBASIC1.53□□□□□ -2.16
NPAS1Q99742 SNRPGP13-201ENST00000442212 177 ntBASIC1.53□□□□□ -2.16
NPAS1Q99742 RNU6-182P-201ENST00000516970 105 ntBASIC1.53□□□□□ -2.16
NPAS1Q99742 RNU6-1270P-201ENST00000517128 108 ntBASIC1.53□□□□□ -2.16
NPAS1Q99742 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
NPAS1Q99742 AC072026.1-201ENST00000605023 201 ntBASIC1.53□□□□□ -2.16
NPAS1Q99742 AC006441.5-201ENST00000612680 209 ntBASIC1.53□□□□□ -2.16
NPAS1Q99742 AL121890.5-201ENST00000620848 304 ntBASIC1.53□□□□□ -2.16
NPAS1Q99742 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.52□□□□□ -2.17
NPAS1Q99742 Y_RNA.233-201ENST00000364407 101 ntBASIC1.52□□□□□ -2.17
NPAS1Q99742 Y_RNA.634-201ENST00000364811 113 ntBASIC1.52□□□□□ -2.17
NPAS1Q99742 MIR548O-201ENST00000408583 114 ntBASIC1.52□□□□□ -2.17
NPAS1Q99742 AC006461.1-201ENST00000412637 326 ntBASIC1.52□□□□□ -2.17
NPAS1Q99742 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.52□□□□□ -2.17
NPAS1Q99742 AC027119.1-201ENST00000440877 241 ntBASIC1.52□□□□□ -2.17
NPAS1Q99742 SNORD13-201ENST00000459299 104 ntBASIC1.52□□□□□ -2.17
NPAS1Q99742 Y_RNA.700-201ENST00000516806 100 ntBASIC1.52□□□□□ -2.17
NPAS1Q99742 U6.106-201ENST00000636360 105 ntBASIC1.52□□□□□ -2.17
NPAS1Q99742 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
NPAS1Q99742 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.51□□□□□ -2.17
NPAS1Q99742 MIR302D-201ENST00000362275 68 ntBASIC1.51□□□□□ -2.17
NPAS1Q99742 Y_RNA.91-201ENST00000363042 107 ntBASIC1.51□□□□□ -2.17
NPAS1Q99742 RPL39P39-201ENST00000455840 151 ntBASIC1.51□□□□□ -2.17
NPAS1Q99742 RNA5SP445-201ENST00000515889 115 ntBASIC1.51□□□□□ -2.17
NPAS1Q99742 SNORA25.15-201ENST00000516487 89 ntBASIC1.51□□□□□ -2.17
NPAS1Q99742 RNA5SP153-201ENST00000516498 76 ntBASIC1.51□□□□□ -2.17
NPAS1Q99742 RNU7-25P-201ENST00000516544 62 ntBASIC1.51□□□□□ -2.17
NPAS1Q99742 RNU6-794P-201ENST00000517261 64 ntBASIC1.51□□□□□ -2.17
NPAS1Q99742 MIR3668-201ENST00000582138 75 ntBASIC1.51□□□□□ -2.17
NPAS1Q99742 AL357312.1-201ENST00000603879 298 ntBASIC1.51□□□□□ -2.17
NPAS1Q99742 GHRLOS.1-201ENST00000610995 70 ntBASIC1.51□□□□□ -2.17
NPAS1Q99742 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NPAS1Q99742 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
NPAS1Q99742 RNU1-17P-201ENST00000363022 152 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 RNU6-275P-201ENST00000364910 107 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 RNA5SP190-201ENST00000365222 118 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 Y_RNA.357-201ENST00000365487 109 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 Y_RNA.412-201ENST00000384001 104 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 Y_RNA.521-201ENST00000384560 114 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 RNU6-1067P-201ENST00000384752 107 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 MIR653-201ENST00000385279 96 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 SNRPGP14-201ENST00000435400 219 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 SNORD123-201ENST00000459473 70 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 RPL30P7-201ENST00000479312 323 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 RNU6-1219P-201ENST00000516143 112 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 RNU6-197P-201ENST00000516680 100 ntBASIC1.5□□□□□ -2.17
NPAS1Q99742 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.5□□□□□ -2.17
NPAS1Q99742 AC015712.3-201ENST00000559380 164 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms