Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC095038.3-201ENST00000634439 195 ntBASIC1.34□□□□□ -2.19
LITAFQ99732 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LITAFQ99732 RNU6-1123P-201ENST00000362347 106 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 Y_RNA.52-201ENST00000362760 96 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 U8.1-201ENST00000362843 134 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 Y_RNA.120-201ENST00000363304 110 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 RNU6-915P-201ENST00000364943 103 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 SNORD113-1-201ENST00000365321 69 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 Y_RNA.410-201ENST00000383992 113 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 MIR17-201ENST00000385012 84 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 MIR34B-201ENST00000385076 84 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 MIR516B2-201ENST00000385190 85 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 RNU6-938P-201ENST00000411285 103 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 Z92545.1-201ENST00000411782 234 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.33□□□□□ -2.2
LITAFQ99732 AL161935.2-201ENST00000414627 60 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 RPL23AP6-201ENST00000446637 472 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 RNA5SP148-201ENST00000516527 94 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 AP001328.1-201ENST00000528550 176 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 MIR4713-201ENST00000582691 75 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 MIR92B-201ENST00000607575 96 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 U2.22-201ENST00000636441 106 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 MIR376A2-201ENST00000636782 80 ntBASIC1.33□□□□□ -2.2
LITAFQ99732 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LITAFQ99732 RNU6-661P-201ENST00000362409 107 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 RNU6-414P-201ENST00000363705 104 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 RNU6-457P-201ENST00000363999 107 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 RNU6-1189P-201ENST00000383958 107 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 MIR526A1-201ENST00000384897 85 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 AC004965.1-201ENST00000413033 213 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.32□□□□□ -2.2
LITAFQ99732 JTBP1-201ENST00000441314 247 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 AC087499.4-201ENST00000448505 178 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 Y_RNA.686-201ENST00000516548 134 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 SNORD36C-201ENST00000516733 66 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 RNU2-60P-201ENST00000517290 128 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 SUMO2P16-201ENST00000519475 264 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 MIR3122-201ENST00000577243 73 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 MIR5089-201ENST00000580047 84 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 MIR5197-201ENST00000583721 112 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 TUG1_4.1-201ENST00000619464 181 ntBASIC1.32□□□□□ -2.2
LITAFQ99732 MTND5P32-201ENST00000560711 1802 ntBASIC1.31□□□□□ -2.2
LITAFQ99732 RNU6-959P-201ENST00000384671 107 ntBASIC1.31□□□□□ -2.2
LITAFQ99732 MIR136-201ENST00000385207 82 ntBASIC1.31□□□□□ -2.2
LITAFQ99732 NDUFB4P4-201ENST00000404822 243 ntBASIC1.31□□□□□ -2.2
LITAFQ99732 AL606753.1-201ENST00000427435 87 ntBASIC1.31□□□□□ -2.2
LITAFQ99732 RPL23AP83-201ENST00000434984 473 ntBASIC1.31□□□□□ -2.2
LITAFQ99732 RNA5SP281-201ENST00000516504 135 ntBASIC1.31□□□□□ -2.2
LITAFQ99732 AP003484.1-201ENST00000530974 250 ntBASIC1.31□□□□□ -2.2
LITAFQ99732 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.31□□□□□ -2.2
LITAFQ99732 MIR6075-201ENST00000620782 95 ntBASIC1.31□□□□□ -2.2
LITAFQ99732 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LITAFQ99732 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
LITAFQ99732 SNORA71.3-201ENST00000362582 128 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 SNORD18B-201ENST00000365659 72 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 U8.17-201ENST00000391292 132 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 AL603914.1-201ENST00000401964 204 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.3□□□□□ -2.2
LITAFQ99732 RNU6-1149P-201ENST00000516810 97 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 SCARNA15-202ENST00000516881 127 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 RNU6-971P-201ENST00000516920 106 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 RNU7-181P-201ENST00000517234 74 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 IGKV3-31-201ENST00000523109 329 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 GTF3AP2-201ENST00000557014 266 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 U7.2-201ENST00000607576 63 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 AC011603.4-201ENST00000611325 277 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 AC106754.2-201ENST00000623006 233 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 AL137790.1-201ENST00000634283 177 ntBASIC1.3□□□□□ -2.2
LITAFQ99732 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.3□□□□□ -2.2
LITAFQ99732 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
LITAFQ99732 AC062016.1-201ENST00000355719 319 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 RNU6-508P-201ENST00000363231 103 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 SNORD48-201ENST00000364953 64 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 SNORA2.2-201ENST00000365473 135 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 MIR539-201ENST00000365690 78 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 Y_RNA.440-201ENST00000384120 114 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
LITAFQ99732 MIR1267-201ENST00000408723 78 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 AL356379.1-201ENST00000414105 126 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.29□□□□□ -2.2
LITAFQ99732 RNU6-1211P-201ENST00000459179 105 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 RNA5SP236-201ENST00000516169 116 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 Y_RNA.690-201ENST00000516603 95 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 DEFB122-202ENST00000569013 197 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 AC024614.2-201ENST00000577584 372 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 SNORA77B-201ENST00000578179 125 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 MIR4429-201ENST00000580105 73 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 FAM106DP-201ENST00000586416 501 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 AC103810.8-201ENST00000607347 118 ntBASIC1.29□□□□□ -2.2
LITAFQ99732 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.29□□□□□ -2.2
LITAFQ99732 Y_RNA.241-201ENST00000364470 117 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 RNU6-309P-201ENST00000364573 106 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 Y_RNA.294-201ENST00000364916 102 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 Y_RNA.494-201ENST00000384432 111 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 MIR196B-201ENST00000384852 84 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 MIR513A1-201ENST00000385138 129 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 SNORA40.5-201ENST00000391061 128 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms