Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.21□□□□□ -2.6
CCDC115Q96NT0 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.21□□□□□ -2.6
CCDC115Q96NT0 AC105081.1-201ENST00000617727 106 ntBASIC-1.21□□□□□ -2.6
CCDC115Q96NT0 RNU4-75P-201ENST00000364621 146 ntBASIC-1.22□□□□□ -2.6
CCDC115Q96NT0 RNU4-66P-201ENST00000365199 138 ntBASIC-1.22□□□□□ -2.6
CCDC115Q96NT0 SNORD37.1-201ENST00000390968 65 ntBASIC-1.22□□□□□ -2.6
CCDC115Q96NT0 RNU2-61P-201ENST00000411069 191 ntBASIC-1.22□□□□□ -2.6
CCDC115Q96NT0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.22□□□□□ -2.6
CCDC115Q96NT0 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.22□□□□□ -2.6
CCDC115Q96NT0 RNU7-53P-201ENST00000516705 60 ntBASIC-1.22□□□□□ -2.6
CCDC115Q96NT0 RNA5SP66-201ENST00000517178 101 ntBASIC-1.22□□□□□ -2.6
CCDC115Q96NT0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.22□□□□□ -2.6
CCDC115Q96NT0 AC004223.4-201ENST00000612426 332 ntBASIC-1.22□□□□□ -2.6
CCDC115Q96NT0 AL596211.1-201ENST00000569873 2277 ntBASIC-1.22□□□□□ -2.61
CCDC115Q96NT0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.23□□□□□ -2.61
CCDC115Q96NT0 MIR517A-201ENST00000385001 87 ntBASIC-1.23□□□□□ -2.61
CCDC115Q96NT0 MIR122-201ENST00000385044 85 ntBASIC-1.23□□□□□ -2.61
CCDC115Q96NT0 MIR513B-201ENST00000385136 84 ntBASIC-1.23□□□□□ -2.61
CCDC115Q96NT0 MTATP6P13-201ENST00000438531 667 ntBASIC-1.23□□□□□ -2.61
CCDC115Q96NT0 SNORA40.9-201ENST00000515895 93 ntBASIC-1.23□□□□□ -2.61
CCDC115Q96NT0 MIR4436A-201ENST00000585278 85 ntBASIC-1.23□□□□□ -2.61
CCDC115Q96NT0 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.24□□□□□ -2.61
CCDC115Q96NT0 U8.6-201ENST00000364939 135 ntBASIC-1.24□□□□□ -2.61
CCDC115Q96NT0 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.24□□□□□ -2.61
CCDC115Q96NT0 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.24□□□□□ -2.61
CCDC115Q96NT0 SNORA72.6-201ENST00000384520 129 ntBASIC-1.24□□□□□ -2.61
CCDC115Q96NT0 SNORD72-201ENST00000390994 80 ntBASIC-1.24□□□□□ -2.61
CCDC115Q96NT0 RNU6-248P-201ENST00000410720 107 ntBASIC-1.24□□□□□ -2.61
CCDC115Q96NT0 RNU6-437P-201ENST00000459408 95 ntBASIC-1.24□□□□□ -2.61
CCDC115Q96NT0 MIR4491-201ENST00000581087 68 ntBASIC-1.24□□□□□ -2.61
CCDC115Q96NT0 AP000942.4-201ENST00000604811 241 ntBASIC-1.24□□□□□ -2.61
CCDC115Q96NT0 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 RNU6-595P-201ENST00000363944 107 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 RNU6-879P-201ENST00000364328 108 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 RNY3P5-201ENST00000384127 102 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 U8.15-201ENST00000390947 134 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 AL603910.2-201ENST00000407268 136 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 CHEK2P4-201ENST00000450340 246 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 RNA5SP401-201ENST00000515920 127 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 RNA5SP67-201ENST00000516422 131 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 RNU6-966P-201ENST00000516479 104 ntBASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.25□□□□□ -2.61
CCDC115Q96NT0 RNU6-926P-201ENST00000384075 107 ntBASIC-1.26□□□□□ -2.61
CCDC115Q96NT0 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.26□□□□□ -2.61
CCDC115Q96NT0 RNU6-95P-201ENST00000384697 107 ntBASIC-1.26□□□□□ -2.61
CCDC115Q96NT0 AL009048.1-201ENST00000450437 298 ntBASIC-1.26□□□□□ -2.61
CCDC115Q96NT0 MTND1P11-201ENST00000456661 876 ntBASIC-1.26□□□□□ -2.61
CCDC115Q96NT0 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.26□□□□□ -2.61
CCDC115Q96NT0 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.26□□□□□ -2.61
CCDC115Q96NT0 RNU7-116P-201ENST00000516940 62 ntBASIC-1.26□□□□□ -2.61
CCDC115Q96NT0 AC004467.1-201ENST00000615678 330 ntBASIC-1.26□□□□□ -2.61
CCDC115Q96NT0 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.27□□□□□ -2.61
CCDC115Q96NT0 MIR196A1-201ENST00000388006 70 ntBASIC-1.27□□□□□ -2.61
CCDC115Q96NT0 AL593851.1-201ENST00000426171 157 ntBASIC-1.27□□□□□ -2.61
CCDC115Q96NT0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.27□□□□□ -2.61
CCDC115Q96NT0 AC011352.1-201ENST00000512300 793 ntBASIC-1.27□□□□□ -2.61
CCDC115Q96NT0 AC024405.2-202ENST00000532731 184 ntBASIC-1.27□□□□□ -2.61
CCDC115Q96NT0 MIR3913-1-201ENST00000577744 102 ntBASIC-1.27□□□□□ -2.61
CCDC115Q96NT0 MIR5188-201ENST00000583467 113 ntBASIC-1.27□□□□□ -2.61
CCDC115Q96NT0 AC019193.3-201ENST00000609144 554 ntBASIC-1.27□□□□□ -2.61
CCDC115Q96NT0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.27□□□□□ -2.61
CCDC115Q96NT0 RNU6-47P-201ENST00000383866 107 ntBASIC-1.28□□□□□ -2.61
CCDC115Q96NT0 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.28□□□□□ -2.61
CCDC115Q96NT0 MIR516B1-201ENST00000385211 90 ntBASIC-1.28□□□□□ -2.61
CCDC115Q96NT0 SNORD110-201ENST00000408189 75 ntBASIC-1.28□□□□□ -2.61
CCDC115Q96NT0 AC108059.2-201ENST00000434626 151 ntBASIC-1.28□□□□□ -2.61
CCDC115Q96NT0 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.28□□□□□ -2.61
CCDC115Q96NT0 RNU7-25P-201ENST00000516544 62 ntBASIC-1.28□□□□□ -2.61
CCDC115Q96NT0 AL662814.1-201ENST00000617364 121 ntBASIC-1.28□□□□□ -2.61
CCDC115Q96NT0 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 RNA5SP245-201ENST00000364239 121 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 RNU6-601P-201ENST00000384540 107 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 RNA5SP237-201ENST00000410414 113 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 AC006210.1-201ENST00000424882 111 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 MTATP6P17-201ENST00000431030 672 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 SNORA25.13-201ENST00000516395 103 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 MIR4273-201ENST00000582824 84 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 AC124303.1-201ENST00000605703 360 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 AP001282.2-201ENST00000616149 309 ntBASIC-1.29□□□□□ -2.62
CCDC115Q96NT0 RNU4-20P-201ENST00000365601 151 ntBASIC-1.3□□□□□ -2.62
CCDC115Q96NT0 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.3□□□□□ -2.62
CCDC115Q96NT0 BX276092.1-201ENST00000427368 251 ntBASIC-1.3□□□□□ -2.62
CCDC115Q96NT0 MTND3P21-201ENST00000433774 331 ntBASIC-1.3□□□□□ -2.62
CCDC115Q96NT0 SCARNA17-201ENST00000516183 144 ntBASIC-1.3□□□□□ -2.62
CCDC115Q96NT0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.3□□□□□ -2.62
CCDC115Q96NT0 AC093726.3-201ENST00000637588 150 ntBASIC-1.3□□□□□ -2.62
CCDC115Q96NT0 RNU6-490P-201ENST00000362985 107 ntBASIC-1.31□□□□□ -2.62
CCDC115Q96NT0 RNU6-254P-201ENST00000363377 107 ntBASIC-1.31□□□□□ -2.62
CCDC115Q96NT0 SNORD83B-201ENST00000386745 93 ntBASIC-1.31□□□□□ -2.62
CCDC115Q96NT0 SNORA40.5-201ENST00000391061 128 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 1040 ms