Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC245166.1-201ENST00000521012 253 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 uc_338.14-201ENST00000613162 166 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 MIR6076-201ENST00000617521 113 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 AC006111.3-201ENST00000622137 383 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRIM47Q96LD4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM47Q96LD4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM47Q96LD4 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 SNORA1B-201ENST00000362535 133 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM47Q96LD4 AL445685.2-201ENST00000422551 342 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 AC244505.4-201ENST00000434905 287 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 SSXP5-201ENST00000443473 287 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 HMGN2P18-201ENST00000450680 270 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 RNU7-96P-201ENST00000459535 64 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 AP002884.2-201ENST00000471647 395 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 RNU7-153P-201ENST00000516455 62 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 SNORD59.2-201ENST00000516873 68 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 RNU6-1015P-201ENST00000517121 99 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM47Q96LD4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 ZNF861P-201ENST00000588126 639 ntBASIC3.51□□□□□ -1.85
TRIM47Q96LD4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM47Q96LD4 Z98742.2-201ENST00000431564 187 ntBASIC3.5□□□□□ -1.85
TRIM47Q96LD4 RNU7-45P-201ENST00000459460 63 ntBASIC3.5□□□□□ -1.85
TRIM47Q96LD4 SNORA31.1-201ENST00000515993 133 ntBASIC3.5□□□□□ -1.85
TRIM47Q96LD4 SNORA31.5-201ENST00000516190 133 ntBASIC3.5□□□□□ -1.85
TRIM47Q96LD4 RNU6-917P-201ENST00000516294 104 ntBASIC3.5□□□□□ -1.85
TRIM47Q96LD4 SNORA25.13-201ENST00000516395 103 ntBASIC3.5□□□□□ -1.85
TRIM47Q96LD4 RNU6-711P-201ENST00000517255 106 ntBASIC3.5□□□□□ -1.85
TRIM47Q96LD4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM47Q96LD4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM47Q96LD4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM47Q96LD4 Y_RNA.241-201ENST00000364470 117 ntBASIC3.49□□□□□ -1.85
TRIM47Q96LD4 SNORA4.4-201ENST00000515921 135 ntBASIC3.49□□□□□ -1.85
TRIM47Q96LD4 RNU6-237P-201ENST00000515985 71 ntBASIC3.49□□□□□ -1.85
TRIM47Q96LD4 SNORD45.4-201ENST00000516629 73 ntBASIC3.49□□□□□ -1.85
TRIM47Q96LD4 RNU6-856P-201ENST00000516959 98 ntBASIC3.49□□□□□ -1.85
TRIM47Q96LD4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM47Q96LD4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM47Q96LD4 MIR4762-201ENST00000585261 75 ntBASIC3.49□□□□□ -1.85
TRIM47Q96LD4 SNORA50A-202ENST00000629536 136 ntBASIC3.49□□□□□ -1.85
TRIM47Q96LD4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM47Q96LD4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM47Q96LD4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM47Q96LD4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM47Q96LD4 SNORA46-201ENST00000384762 135 ntBASIC3.48□□□□□ -1.85
TRIM47Q96LD4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM47Q96LD4 RNU7-23P-201ENST00000459465 62 ntBASIC3.48□□□□□ -1.85
TRIM47Q96LD4 RNU6-965P-201ENST00000516721 96 ntBASIC3.48□□□□□ -1.85
TRIM47Q96LD4 AP002004.2-201ENST00000531656 154 ntBASIC3.48□□□□□ -1.85
TRIM47Q96LD4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM47Q96LD4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM47Q96LD4 MAPK10-362ENST00000641864 4484 ntBASIC3.47□□□□□ -1.85
TRIM47Q96LD4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
TRIM47Q96LD4 U8.5-201ENST00000364528 136 ntBASIC3.47□□□□□ -1.85
TRIM47Q96LD4 Y_RNA.336-201ENST00000365307 109 ntBASIC3.47□□□□□ -1.85
TRIM47Q96LD4 Y_RNA.567-201ENST00000384736 106 ntBASIC3.47□□□□□ -1.85
TRIM47Q96LD4 RNA5SP38-201ENST00000410750 119 ntBASIC3.47□□□□□ -1.85
TRIM47Q96LD4 AC060773.1-201ENST00000421698 310 ntBASIC3.47□□□□□ -1.85
TRIM47Q96LD4 UQCRHP3-201ENST00000451503 251 ntBASIC3.47□□□□□ -1.85
TRIM47Q96LD4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM47Q96LD4 AC114811.1-201ENST00000507207 168 ntBASIC3.47□□□□□ -1.85
TRIM47Q96LD4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TRIM47Q96LD4 AL513043.2-201ENST00000573941 143 ntBASIC3.47□□□□□ -1.85
TRIM47Q96LD4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TRIM47Q96LD4 MIR1248-201ENST00000629190 106 ntBASIC3.47□□□□□ -1.85
TRIM47Q96LD4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM47Q96LD4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM47Q96LD4 MAPK10-322ENST00000641485 4530 ntBASIC3.46□□□□□ -1.86
TRIM47Q96LD4 snoU2-30.2-201ENST00000362805 70 ntBASIC3.46□□□□□ -1.86
TRIM47Q96LD4 SNORA32-201ENST00000384072 121 ntBASIC3.46□□□□□ -1.86
TRIM47Q96LD4 RNU6-851P-201ENST00000384565 107 ntBASIC3.46□□□□□ -1.86
TRIM47Q96LD4 SNORA80E-201ENST00000384744 137 ntBASIC3.46□□□□□ -1.86
TRIM47Q96LD4 RNA5SP467-201ENST00000391274 118 ntBASIC3.46□□□□□ -1.86
TRIM47Q96LD4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM47Q96LD4 RNU1-98P-201ENST00000458992 160 ntBASIC3.46□□□□□ -1.86
TRIM47Q96LD4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
TRIM47Q96LD4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM47Q96LD4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM47Q96LD4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM47Q96LD4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM47Q96LD4 SNORA22.1-201ENST00000362701 134 ntBASIC3.45□□□□□ -1.86
TRIM47Q96LD4 SNORD115-39-201ENST00000363694 82 ntBASIC3.45□□□□□ -1.86
TRIM47Q96LD4 Y_RNA.494-201ENST00000384432 111 ntBASIC3.45□□□□□ -1.86
TRIM47Q96LD4 RNU2-59P-201ENST00000410482 191 ntBASIC3.45□□□□□ -1.86
TRIM47Q96LD4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM47Q96LD4 RPS29P28-201ENST00000446439 141 ntBASIC3.45□□□□□ -1.86
TRIM47Q96LD4 RN7SL75P-201ENST00000461926 281 ntBASIC3.45□□□□□ -1.86
TRIM47Q96LD4 RNU7-2P-201ENST00000516096 62 ntBASIC3.45□□□□□ -1.86
TRIM47Q96LD4 AC090821.2-201ENST00000523552 176 ntBASIC3.45□□□□□ -1.86
TRIM47Q96LD4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM47Q96LD4 AC103810.1-201ENST00000579873 453 ntBASIC3.45□□□□□ -1.86
TRIM47Q96LD4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM47Q96LD4 AC096644.4-201ENST00000563417 2912 ntBASIC3.45□□□□□ -1.86
TRIM47Q96LD4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM47Q96LD4 RNU6-624P-201ENST00000363411 107 ntBASIC3.44□□□□□ -1.86
TRIM47Q96LD4 RNU6-198P-201ENST00000384258 104 ntBASIC3.44□□□□□ -1.86
TRIM47Q96LD4 RNU1-101P-201ENST00000391171 127 ntBASIC3.44□□□□□ -1.86
TRIM47Q96LD4 UBL5P3-201ENST00000475112 231 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms