Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RNU1-14P-201ENST00000362759 152 ntBASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 RNA5SP366-201ENST00000365454 123 ntBASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 SNORD101-201ENST00000384027 73 ntBASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 MIR588-201ENST00000384900 83 ntBASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 AL138878.1-201ENST00000405131 347 ntBASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 RNA5SP137-201ENST00000516833 135 ntBASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 CYCSP29-201ENST00000533731 318 ntBASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 AC006064.5-201ENST00000541782 248 ntBASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 MIR4696-201ENST00000581431 70 ntBASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 MIR383-201ENST00000362257 73 ntBASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 RNA5SP192-201ENST00000364404 120 ntBASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 AC244023.1-201ENST00000426884 112 ntBASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 MTND4LP1-201ENST00000446263 157 ntBASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 RNA5SP445-201ENST00000515889 115 ntBASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 MIR4709-201ENST00000577272 72 ntBASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 AC026271.5-201ENST00000577873 130 ntBASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 AC242498.1-201ENST00000604134 111 ntBASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 MIR3653-201ENST00000625572 110 ntBASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
MS4A3Q96HJ5 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
MS4A3Q96HJ5 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
MS4A3Q96HJ5 RNU6-53P-201ENST00000365367 106 ntBASIC3.69□□□□□ -1.82
MS4A3Q96HJ5 Y_RNA.375-201ENST00000365625 101 ntBASIC3.69□□□□□ -1.82
MS4A3Q96HJ5 RNU1-89P-201ENST00000384592 164 ntBASIC3.69□□□□□ -1.82
MS4A3Q96HJ5 MIR29C-201ENST00000385231 88 ntBASIC3.69□□□□□ -1.82
MS4A3Q96HJ5 RPS29P19-201ENST00000479709 171 ntBASIC3.69□□□□□ -1.82
MS4A3Q96HJ5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.69□□□□□ -1.82
MS4A3Q96HJ5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
MS4A3Q96HJ5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 RNU4-58P-201ENST00000363192 141 ntBASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 RNU6-654P-201ENST00000364373 107 ntBASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 MIR519A1-201ENST00000385257 85 ntBASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 RNU6-274P-201ENST00000459566 107 ntBASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 SNORA31.9-201ENST00000516429 84 ntBASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 RNA5SP73-201ENST00000516744 108 ntBASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 MIR4474-201ENST00000579189 78 ntBASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 uc_338.32-201ENST00000615087 172 ntBASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
MS4A3Q96HJ5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 MIR424-201ENST00000362227 98 ntBASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 RNU6-668P-201ENST00000364180 107 ntBASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 SNORA37-201ENST00000384504 129 ntBASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 SNORA3C-201ENST00000408792 125 ntBASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 RN7SL860P-201ENST00000473738 223 ntBASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 AC099513.1-201ENST00000490423 301 ntBASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 SUB1P4-201ENST00000566062 339 ntBASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 MIR4644-201ENST00000579929 84 ntBASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 MIR6716-201ENST00000613413 80 ntBASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.67□□□□□ -1.82
MS4A3Q96HJ5 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 AC016717.2-201ENST00000609089 5141 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 MAPK10-322ENST00000641485 4530 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 MIR423-201ENST00000362201 94 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 MIR30D-201ENST00000362283 70 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 RNU6-461P-201ENST00000364195 107 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 SNORD113-4-201ENST00000364802 75 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 Z98941.1-201ENST00000407764 100 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 AL606490.4-201ENST00000423117 127 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 RN7SL385P-201ENST00000468873 276 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 RNU6-531P-201ENST00000516694 104 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 SNORD59.2-201ENST00000516873 68 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 RNA5SP143-201ENST00000516936 115 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 AL356274.2-201ENST00000624379 3752 ntBASIC3.66□□□□□ -1.82
MS4A3Q96HJ5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
MS4A3Q96HJ5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.65□□□□□ -1.82
MS4A3Q96HJ5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.65□□□□□ -1.82
MS4A3Q96HJ5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
MS4A3Q96HJ5 MIR520A-201ENST00000384862 85 ntBASIC3.65□□□□□ -1.83
MS4A3Q96HJ5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
MS4A3Q96HJ5 RNU4-88P-201ENST00000411220 86 ntBASIC3.65□□□□□ -1.83
MS4A3Q96HJ5 AL356095.1-201ENST00000417217 199 ntBASIC3.65□□□□□ -1.83
MS4A3Q96HJ5 AC009474.2-201ENST00000451383 136 ntBASIC3.65□□□□□ -1.83
MS4A3Q96HJ5 RNU7-195P-201ENST00000458793 62 ntBASIC3.65□□□□□ -1.83
MS4A3Q96HJ5 RNU6-982P-201ENST00000516216 102 ntBASIC3.65□□□□□ -1.83
MS4A3Q96HJ5 SNORA9.3-201ENST00000516383 129 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms