Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SNORD77B-201ENST00000391112 67 ntBASIC3.06□□□□□ -1.92
TRIM11Q96F44 SNORA48.7-201ENST00000391302 135 ntBASIC3.06□□□□□ -1.92
TRIM11Q96F44 SNORD88.1-201ENST00000408684 91 ntBASIC3.06□□□□□ -1.92
TRIM11Q96F44 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM11Q96F44 POLR2J4-204ENST00000418424 324 ntBASIC3.06□□□□□ -1.92
TRIM11Q96F44 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.06□□□□□ -1.92
TRIM11Q96F44 RNU6-1041P-201ENST00000516254 102 ntBASIC3.06□□□□□ -1.92
TRIM11Q96F44 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.06□□□□□ -1.92
TRIM11Q96F44 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM11Q96F44 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
TRIM11Q96F44 RNU6-1313P-201ENST00000362622 102 ntBASIC3.05□□□□□ -1.92
TRIM11Q96F44 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM11Q96F44 SNORA31.4-201ENST00000516049 129 ntBASIC3.05□□□□□ -1.92
TRIM11Q96F44 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.05□□□□□ -1.92
TRIM11Q96F44 CTSLP2-204ENST00000629029 392 ntBASIC3.05□□□□□ -1.92
TRIM11Q96F44 MIR6733-201ENST00000635723 61 ntBASIC3.05□□□□□ -1.92
TRIM11Q96F44 AC073346.2-201ENST00000624724 2058 ntBASIC3.05□□□□□ -1.92
TRIM11Q96F44 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM11Q96F44 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM11Q96F44 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM11Q96F44 Y_RNA.191-201ENST00000363972 113 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 SNORA1.1-201ENST00000364671 133 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 Y_RNA.316-201ENST00000365118 111 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 RNU6-616P-201ENST00000384353 107 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 SNORA8-201ENST00000384574 139 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 MIR515-2-201ENST00000384883 83 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 MIR515-1-201ENST00000384884 83 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 AC022018.1-201ENST00000430685 241 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 MICF-203ENST00000432679 129 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 RPS29P6-201ENST00000438196 145 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 RNU7-113P-201ENST00000459273 62 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 SNORA9.3-201ENST00000516383 129 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 AC024995.1-201ENST00000523014 93 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.04□□□□□ -1.92
TRIM11Q96F44 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM11Q96F44 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM11Q96F44 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM11Q96F44 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TRIM11Q96F44 AC092881.1-201ENST00000638218 2733 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 RNU6-633P-201ENST00000362612 103 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 SNORD115-2-201ENST00000362842 82 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 RNA5SP374-201ENST00000362939 125 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 Y_RNA.94-201ENST00000363068 106 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 Y_RNA.241-201ENST00000364470 117 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 SNORD115-20-201ENST00000365099 82 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 RNA5SP482-201ENST00000391269 118 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 MIR889-201ENST00000401280 79 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 AC092427.1-202ENST00000430569 476 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.03□□□□□ -1.92
TRIM11Q96F44 RPPH1-2P-201ENST00000516688 293 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 MIR4446-201ENST00000578505 67 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 MIR3605-201ENST00000583214 100 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 ZNF861P-201ENST00000588126 639 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 ELOCP29-201ENST00000588193 334 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 MIR5739-201ENST00000619803 80 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 AL512310.12-203ENST00000640543 90 ntBASIC3.03□□□□□ -1.92
TRIM11Q96F44 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM11Q96F44 MIR26A1-201ENST00000362205 77 ntBASIC3.02□□□□□ -1.93
TRIM11Q96F44 MIR422A-201ENST00000362286 90 ntBASIC3.02□□□□□ -1.93
TRIM11Q96F44 MIR95-201ENST00000385072 81 ntBASIC3.02□□□□□ -1.93
TRIM11Q96F44 RN7SKP27-201ENST00000410684 333 ntBASIC3.02□□□□□ -1.93
TRIM11Q96F44 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM11Q96F44 MIR3944-201ENST00000581277 108 ntBASIC3.02□□□□□ -1.93
TRIM11Q96F44 MIR7157-201ENST00000635801 60 ntBASIC3.02□□□□□ -1.93
TRIM11Q96F44 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TRIM11Q96F44 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM11Q96F44 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.02□□□□□ -1.93
TRIM11Q96F44 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
TRIM11Q96F44 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-34-201ENST00000362441 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-12-201ENST00000362583 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-29-201ENST00000362834 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-9-201ENST00000362912 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-21-201ENST00000362963 81 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-14-201ENST00000363090 81 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-41-201ENST00000363608 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-11-201ENST00000363616 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-5-201ENST00000363633 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-39-201ENST00000363694 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-4-201ENST00000363810 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-6-201ENST00000363942 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 RNA5SP387-201ENST00000364226 106 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-42-201ENST00000364273 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-15-201ENST00000364809 81 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-26-201ENST00000365067 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-10-201ENST00000365073 81 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-43-201ENST00000365503 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SNORD115-36-201ENST00000365629 82 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 BX510359.1-201ENST00000456973 237 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 AC108729.3-201ENST00000513484 108 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SCARNA13-201ENST00000516672 275 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 RN7SKP57-201ENST00000517248 293 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 RPL12P50-201ENST00000603116 116 ntBASIC3.01□□□□□ -1.93
TRIM11Q96F44 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
TRIM11Q96F44 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM11Q96F44 RNU1-23P-201ENST00000363361 144 ntBASIC3□□□□□ -1.93
TRIM11Q96F44 Y_RNA.171-201ENST00000363760 102 ntBASIC3□□□□□ -1.93
TRIM11Q96F44 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3□□□□□ -1.93
TRIM11Q96F44 Z92545.1-201ENST00000411782 234 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms