Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.44□□□□□ -2.18
RAB40AQ8WXH6 AC006441.5-201ENST00000612680 209 ntBASIC1.44□□□□□ -2.18
RAB40AQ8WXH6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
RAB40AQ8WXH6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 Y_RNA.308-201ENST00000365043 101 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 RNA5SP190-201ENST00000365222 118 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 MT-TT-201ENST00000387460 66 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 Y_RNA.626-201ENST00000411288 95 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 SNORD111.1-201ENST00000516421 86 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 RN7SKP88-201ENST00000516847 250 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 SNORA18.7-201ENST00000516910 131 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 MIR8081-201ENST00000611533 95 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 7SK.8-201ENST00000612110 250 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 7SK.11-201ENST00000615477 250 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 AC015726.2-201ENST00000620112 122 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 7SK.13-201ENST00000622040 250 ntBASIC1.43□□□□□ -2.18
RAB40AQ8WXH6 RNY1-201ENST00000364228 113 ntBASIC1.42□□□□□ -2.18
RAB40AQ8WXH6 MT-TG-201ENST00000387429 68 ntBASIC1.42□□□□□ -2.18
RAB40AQ8WXH6 RNU6-1228P-201ENST00000391014 107 ntBASIC1.42□□□□□ -2.18
RAB40AQ8WXH6 AL606845.1-201ENST00000404881 255 ntBASIC1.42□□□□□ -2.18
RAB40AQ8WXH6 RPL39P39-201ENST00000455840 151 ntBASIC1.42□□□□□ -2.18
RAB40AQ8WXH6 RNY3P16-201ENST00000516338 101 ntBASIC1.42□□□□□ -2.18
RAB40AQ8WXH6 MIR4255-201ENST00000579351 72 ntBASIC1.42□□□□□ -2.18
RAB40AQ8WXH6 AP000942.4-201ENST00000604811 241 ntBASIC1.42□□□□□ -2.18
RAB40AQ8WXH6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
RAB40AQ8WXH6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RAB40AQ8WXH6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RAB40AQ8WXH6 RNU6-103P-201ENST00000363686 107 ntBASIC1.41□□□□□ -2.18
RAB40AQ8WXH6 Y_RNA.199-201ENST00000364014 102 ntBASIC1.41□□□□□ -2.18
RAB40AQ8WXH6 RNU6-493P-201ENST00000391321 108 ntBASIC1.41□□□□□ -2.18
RAB40AQ8WXH6 SCARNA8-201ENST00000515924 131 ntBASIC1.41□□□□□ -2.18
RAB40AQ8WXH6 RNU6-947P-201ENST00000516264 106 ntBASIC1.41□□□□□ -2.18
RAB40AQ8WXH6 RNU6-1299P-201ENST00000516316 100 ntBASIC1.41□□□□□ -2.18
RAB40AQ8WXH6 RNU6-453P-201ENST00000516819 85 ntBASIC1.41□□□□□ -2.18
RAB40AQ8WXH6 SNORA74.3-201ENST00000517108 154 ntBASIC1.41□□□□□ -2.18
RAB40AQ8WXH6 CYP3A52P-201ENST00000563326 91 ntBASIC1.41□□□□□ -2.18
RAB40AQ8WXH6 RNU6-923P-201ENST00000364753 107 ntBASIC1.4□□□□□ -2.19
RAB40AQ8WXH6 Y_RNA.476-201ENST00000384347 108 ntBASIC1.4□□□□□ -2.19
RAB40AQ8WXH6 Y_RNA.486-201ENST00000384398 107 ntBASIC1.4□□□□□ -2.19
RAB40AQ8WXH6 SNORA26-201ENST00000391286 122 ntBASIC1.4□□□□□ -2.19
RAB40AQ8WXH6 MIR548O-201ENST00000408583 114 ntBASIC1.4□□□□□ -2.19
RAB40AQ8WXH6 RNU2-55P-201ENST00000411146 174 ntBASIC1.4□□□□□ -2.19
RAB40AQ8WXH6 SNORD13-201ENST00000459299 104 ntBASIC1.4□□□□□ -2.19
RAB40AQ8WXH6 SNORD123-201ENST00000459473 70 ntBASIC1.4□□□□□ -2.19
RAB40AQ8WXH6 RNA5SP458-201ENST00000516188 119 ntBASIC1.4□□□□□ -2.19
RAB40AQ8WXH6 RNU6-830P-201ENST00000516353 107 ntBASIC1.4□□□□□ -2.19
RAB40AQ8WXH6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.4□□□□□ -2.19
RAB40AQ8WXH6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 RNU6-379P-201ENST00000363813 104 ntBASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 Y_RNA.200-201ENST00000364018 102 ntBASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 Y_RNA.432-201ENST00000384087 111 ntBASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 SNORA67.5-201ENST00000391036 107 ntBASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 RNU2-70P-201ENST00000410718 179 ntBASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 Y_RNA.622-201ENST00000411091 108 ntBASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 RNU1-98P-201ENST00000458992 160 ntBASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 RNU6-365P-201ENST00000517113 106 ntBASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 RNU6-165P-201ENST00000517170 99 ntBASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 AC009779.6-201ENST00000603972 165 ntBASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 MIR8065-201ENST00000620577 100 ntBASIC1.39□□□□□ -2.19
RAB40AQ8WXH6 AL442644.1-201ENST00000454390 3105 ntBASIC1.38□□□□□ -2.19
RAB40AQ8WXH6 Y_RNA.7-201ENST00000362352 102 ntBASIC1.38□□□□□ -2.19
RAB40AQ8WXH6 Y_RNA.83-201ENST00000363005 113 ntBASIC1.38□□□□□ -2.19
RAB40AQ8WXH6 RNU6-728P-201ENST00000365375 104 ntBASIC1.38□□□□□ -2.19
RAB40AQ8WXH6 Y_RNA.515-201ENST00000384535 112 ntBASIC1.38□□□□□ -2.19
RAB40AQ8WXH6 MIR520C-201ENST00000385005 87 ntBASIC1.38□□□□□ -2.19
RAB40AQ8WXH6 SNRPGP13-201ENST00000442212 177 ntBASIC1.38□□□□□ -2.19
RAB40AQ8WXH6 Y_RNA.666-201ENST00000516187 112 ntBASIC1.38□□□□□ -2.19
RAB40AQ8WXH6 RNU7-25P-201ENST00000516544 62 ntBASIC1.38□□□□□ -2.19
RAB40AQ8WXH6 RNU7-43P-201ENST00000516554 64 ntBASIC1.38□□□□□ -2.19
RAB40AQ8WXH6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
RAB40AQ8WXH6 MIR411-201ENST00000362239 96 ntBASIC1.37□□□□□ -2.19
RAB40AQ8WXH6 Y_RNA.140-201ENST00000363474 103 ntBASIC1.37□□□□□ -2.19
RAB40AQ8WXH6 SNORD45.3-201ENST00000363836 72 ntBASIC1.37□□□□□ -2.19
RAB40AQ8WXH6 RNU6-484P-201ENST00000384016 107 ntBASIC1.37□□□□□ -2.19
RAB40AQ8WXH6 Y_RNA.552-201ENST00000384665 112 ntBASIC1.37□□□□□ -2.19
RAB40AQ8WXH6 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
RAB40AQ8WXH6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RAB40AQ8WXH6 MIR4744-201ENST00000581563 82 ntBASIC1.37□□□□□ -2.19
RAB40AQ8WXH6 AP000942.3-201ENST00000603702 160 ntBASIC1.37□□□□□ -2.19
RAB40AQ8WXH6 RNU2-4P-201ENST00000606190 192 ntBASIC1.37□□□□□ -2.19
RAB40AQ8WXH6 AC141273.2-201ENST00000618989 130 ntBASIC1.37□□□□□ -2.19
RAB40AQ8WXH6 Y_RNA.634-201ENST00000364811 113 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 SNORD24-201ENST00000383884 75 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 RNU4-70P-201ENST00000384579 139 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 U8.17-201ENST00000391292 132 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 SNORA79-201ENST00000408376 140 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 SNRPGP8-201ENST00000454064 226 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 RNA5SP153-201ENST00000516498 76 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 RNU6-504P-201ENST00000516568 104 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 RNU6-388P-201ENST00000517012 105 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 RNU6-389P-201ENST00000517048 105 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 MIR4308-201ENST00000580634 81 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 MIR4764-201ENST00000580680 88 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 Z83818.1-201ENST00000603584 150 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.36□□□□□ -2.19
RAB40AQ8WXH6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 310 ms