Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 AL021368.2-201ENST00000606125 5352 ntBASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.49□□□□□ -1.85
SCUBE3Q8IX30 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SCUBE3Q8IX30 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SCUBE3Q8IX30 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SCUBE3Q8IX30 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SCUBE3Q8IX30 Y_RNA.370-201ENST00000365589 108 ntBASIC3.49□□□□□ -1.85
SCUBE3Q8IX30 SNORA32-201ENST00000384072 121 ntBASIC3.49□□□□□ -1.85
SCUBE3Q8IX30 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SCUBE3Q8IX30 RNU7-67P-201ENST00000459003 62 ntBASIC3.49□□□□□ -1.85
SCUBE3Q8IX30 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.49□□□□□ -1.85
SCUBE3Q8IX30 MIR6717-201ENST00000622747 73 ntBASIC3.49□□□□□ -1.85
SCUBE3Q8IX30 RNU1-70P-201ENST00000362618 164 ntBASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 MIR184-201ENST00000384962 84 ntBASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 SNORA26.7-201ENST00000391288 122 ntBASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 AL445685.2-201ENST00000422551 342 ntBASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 RNU7-2P-201ENST00000516096 62 ntBASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 uc_338.1-201ENST00000612113 180 ntBASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 AC245060.5-201ENST00000610778 3293 ntBASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.48□□□□□ -1.85
SCUBE3Q8IX30 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SCUBE3Q8IX30 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SCUBE3Q8IX30 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SCUBE3Q8IX30 RNA5SP493-201ENST00000364115 91 ntBASIC3.47□□□□□ -1.85
SCUBE3Q8IX30 COTL1P1-201ENST00000422309 375 ntBASIC3.47□□□□□ -1.85
SCUBE3Q8IX30 AL355596.1-201ENST00000565399 3996 ntBASIC3.47□□□□□ -1.85
SCUBE3Q8IX30 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SCUBE3Q8IX30 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SCUBE3Q8IX30 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.46□□□□□ -1.85
SCUBE3Q8IX30 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 RNU6-833P-201ENST00000363486 107 ntBASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 CD24P4-201ENST00000382840 243 ntBASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 RNU6-301P-201ENST00000384277 107 ntBASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 SNORA11.4-201ENST00000408823 129 ntBASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 AL161932.1-201ENST00000437408 146 ntBASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 S100A11P2-201ENST00000467589 312 ntBASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 AC093729.1-201ENST00000513074 128 ntBASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 MIR7112-201ENST00000616126 65 ntBASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 SNORA50A-202ENST00000629536 136 ntBASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.46□□□□□ -1.86
SCUBE3Q8IX30 AC007336.1-201ENST00000576365 3828 ntBASIC3.45□□□□□ -1.86
SCUBE3Q8IX30 RNU6-457P-201ENST00000363999 107 ntBASIC3.45□□□□□ -1.86
SCUBE3Q8IX30 RNU6-524P-201ENST00000384270 107 ntBASIC3.45□□□□□ -1.86
SCUBE3Q8IX30 Y_RNA.565-201ENST00000384719 101 ntBASIC3.45□□□□□ -1.86
SCUBE3Q8IX30 MIR1262-201ENST00000408276 93 ntBASIC3.45□□□□□ -1.86
SCUBE3Q8IX30 AC003685.2-201ENST00000422795 395 ntBASIC3.45□□□□□ -1.86
SCUBE3Q8IX30 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.45□□□□□ -1.86
SCUBE3Q8IX30 MIR4712-201ENST00000583750 82 ntBASIC3.45□□□□□ -1.86
SCUBE3Q8IX30 SNORD3E-202ENST00000627253 216 ntBASIC3.45□□□□□ -1.86
SCUBE3Q8IX30 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.45□□□□□ -1.86
SCUBE3Q8IX30 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SCUBE3Q8IX30 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SCUBE3Q8IX30 SNORD115-27-201ENST00000364430 82 ntBASIC3.44□□□□□ -1.86
SCUBE3Q8IX30 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.44□□□□□ -1.86
SCUBE3Q8IX30 RPS29P28-201ENST00000446439 141 ntBASIC3.44□□□□□ -1.86
SCUBE3Q8IX30 RPS29P29-201ENST00000456396 171 ntBASIC3.44□□□□□ -1.86
SCUBE3Q8IX30 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.44□□□□□ -1.86
SCUBE3Q8IX30 AC104984.5-201ENST00000586878 94 ntBASIC3.44□□□□□ -1.86
SCUBE3Q8IX30 MIR4791-201ENST00000607666 84 ntBASIC3.44□□□□□ -1.86
SCUBE3Q8IX30 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SCUBE3Q8IX30 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.44□□□□□ -1.86
SCUBE3Q8IX30 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SCUBE3Q8IX30 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.43□□□□□ -1.86
SCUBE3Q8IX30 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SCUBE3Q8IX30 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SCUBE3Q8IX30 Y_RNA.567-201ENST00000384736 106 ntBASIC3.43□□□□□ -1.86
SCUBE3Q8IX30 RNU6-826P-201ENST00000516827 104 ntBASIC3.43□□□□□ -1.86
SCUBE3Q8IX30 MIR3169-201ENST00000578032 83 ntBASIC3.43□□□□□ -1.86
SCUBE3Q8IX30 AC145423.2-201ENST00000610631 239 ntBASIC3.43□□□□□ -1.86
SCUBE3Q8IX30 AC006386.2-201ENST00000624491 75 ntBASIC3.43□□□□□ -1.86
SCUBE3Q8IX30 AC012005.1-201ENST00000624575 75 ntBASIC3.43□□□□□ -1.86
SCUBE3Q8IX30 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
SCUBE3Q8IX30 RNU6-1244P-201ENST00000363614 108 ntBASIC3.42□□□□□ -1.86
SCUBE3Q8IX30 RNU6-1229P-201ENST00000364295 107 ntBASIC3.42□□□□□ -1.86
SCUBE3Q8IX30 SNORA24-201ENST00000384096 131 ntBASIC3.42□□□□□ -1.86
SCUBE3Q8IX30 MIR519C-201ENST00000385053 87 ntBASIC3.42□□□□□ -1.86
SCUBE3Q8IX30 MIR591-201ENST00000385290 95 ntBASIC3.42□□□□□ -1.86
SCUBE3Q8IX30 CST9LP2-201ENST00000437612 320 ntBASIC3.42□□□□□ -1.86
SCUBE3Q8IX30 SNORA31.10-201ENST00000516482 106 ntBASIC3.42□□□□□ -1.86
SCUBE3Q8IX30 SEPT14P17-201ENST00000617978 177 ntBASIC3.42□□□□□ -1.86
SCUBE3Q8IX30 MIR7153-201ENST00000637758 57 ntBASIC3.42□□□□□ -1.86
SCUBE3Q8IX30 AL365361.1-201ENST00000566942 3481 ntBASIC3.42□□□□□ -1.86
SCUBE3Q8IX30 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SCUBE3Q8IX30 AC005336.3-201ENST00000623833 2679 ntBASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 U8.16-201ENST00000391279 133 ntBASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 RNA5SP229-201ENST00000410809 99 ntBASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 RNU6-1190P-201ENST00000410811 104 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms