Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC022217.4-201ENST00000604389 163 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VRK3Q8IV63 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VRK3Q8IV63 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.13□□□□□ -2.07
VRK3Q8IV63 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VRK3Q8IV63 ZNF720P1-201ENST00000562403 1939 ntBASIC2.13□□□□□ -2.07
VRK3Q8IV63 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
VRK3Q8IV63 Y_RNA.547-201ENST00000384654 119 ntBASIC2.13□□□□□ -2.07
VRK3Q8IV63 RNA5SP323-201ENST00000391094 133 ntBASIC2.13□□□□□ -2.07
VRK3Q8IV63 AC011753.1-201ENST00000451001 220 ntBASIC2.13□□□□□ -2.07
VRK3Q8IV63 MIR3169-201ENST00000578032 83 ntBASIC2.13□□□□□ -2.07
VRK3Q8IV63 MIR3945-201ENST00000581853 98 ntBASIC2.13□□□□□ -2.07
VRK3Q8IV63 RNU6-94P-201ENST00000607728 107 ntBASIC2.13□□□□□ -2.07
VRK3Q8IV63 AC064859.1-201ENST00000624741 174 ntBASIC2.13□□□□□ -2.07
VRK3Q8IV63 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
VRK3Q8IV63 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
VRK3Q8IV63 RNU6-349P-201ENST00000362402 107 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 Y_RNA.37-201ENST00000362606 108 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 RNU6-862P-201ENST00000362804 105 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 Y_RNA.198-201ENST00000364013 98 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 Y_RNA.336-201ENST00000365307 109 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 Y_RNA.369-201ENST00000365568 117 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 RNU6-1189P-201ENST00000383958 107 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 RNU6-442P-201ENST00000383968 104 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 Y_RNA.549-201ENST00000384657 102 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 SNORD12C-201ENST00000386307 89 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 AL023284.1-201ENST00000403956 276 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 RNU6-938P-201ENST00000411285 103 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 AC009238.1-201ENST00000442165 424 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 AC009237.6-201ENST00000446969 424 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 AC104435.1-201ENST00000483483 166 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 SNORA72.7-201ENST00000516349 94 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 RNA5SP200-201ENST00000516360 103 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 MIR5582-201ENST00000579697 68 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 AC022513.1-201ENST00000624512 117 ntBASIC2.12□□□□□ -2.07
VRK3Q8IV63 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
VRK3Q8IV63 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VRK3Q8IV63 SNORD115-28-201ENST00000363931 81 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 SNORD14E-201ENST00000364009 85 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 Y_RNA.323-201ENST00000365157 109 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 RNA5SP482-201ENST00000391269 118 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 TRBV12-1-201ENST00000479785 344 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 RNU7-25P-201ENST00000516544 62 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 SCARNA16.3-201ENST00000516595 184 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 RNU7-28P-201ENST00000516759 62 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.11□□□□□ -2.07
VRK3Q8IV63 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 AC104984.5-201ENST00000586878 94 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 AC006254.2-201ENST00000603259 279 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 AL449363.1-201ENST00000617815 186 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 AC106754.2-201ENST00000623006 233 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 AC005336.3-201ENST00000623833 2679 ntBASIC2.11□□□□□ -2.07
VRK3Q8IV63 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VRK3Q8IV63 SNORD68-201ENST00000363214 84 ntBASIC2.1□□□□□ -2.07
VRK3Q8IV63 snoU2-30.1-201ENST00000365012 70 ntBASIC2.1□□□□□ -2.07
VRK3Q8IV63 SNORA2.2-201ENST00000365473 135 ntBASIC2.1□□□□□ -2.07
VRK3Q8IV63 Y_RNA.440-201ENST00000384120 114 ntBASIC2.1□□□□□ -2.07
VRK3Q8IV63 RN7SKP223-201ENST00000410582 62 ntBASIC2.1□□□□□ -2.07
VRK3Q8IV63 RNU6-240P-201ENST00000516098 97 ntBASIC2.1□□□□□ -2.07
VRK3Q8IV63 SNORD45.4-201ENST00000516629 73 ntBASIC2.1□□□□□ -2.07
VRK3Q8IV63 MIR6715A-201ENST00000615929 79 ntBASIC2.1□□□□□ -2.07
VRK3Q8IV63 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.1□□□□□ -2.07
VRK3Q8IV63 MIR6873-201ENST00000622788 63 ntBASIC2.1□□□□□ -2.07
VRK3Q8IV63 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
VRK3Q8IV63 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VRK3Q8IV63 ZNF658B-202ENST00000615961 3375 ntBASIC2.1□□□□□ -2.07
VRK3Q8IV63 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VRK3Q8IV63 RNU6-766P-201ENST00000362478 107 ntBASIC2.09□□□□□ -2.07
VRK3Q8IV63 Y_RNA.163-201ENST00000363702 113 ntBASIC2.09□□□□□ -2.07
VRK3Q8IV63 Y_RNA.328-201ENST00000365208 113 ntBASIC2.09□□□□□ -2.07
VRK3Q8IV63 RNU6-1014P-201ENST00000383940 103 ntBASIC2.09□□□□□ -2.07
VRK3Q8IV63 SNORA67.3-201ENST00000384366 140 ntBASIC2.09□□□□□ -2.07
VRK3Q8IV63 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
VRK3Q8IV63 AL356320.1-201ENST00000429616 163 ntBASIC2.09□□□□□ -2.07
VRK3Q8IV63 AL606517.2-201ENST00000442855 241 ntBASIC2.09□□□□□ -2.07
VRK3Q8IV63 Y_RNA.677-201ENST00000516401 85 ntBASIC2.09□□□□□ -2.07
VRK3Q8IV63 SNORD36C-201ENST00000516733 66 ntBASIC2.09□□□□□ -2.07
VRK3Q8IV63 AL035470.1-201ENST00000622571 220 ntBASIC2.09□□□□□ -2.07
VRK3Q8IV63 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.09□□□□□ -2.07
VRK3Q8IV63 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VRK3Q8IV63 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
VRK3Q8IV63 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.09□□□□□ -2.08
VRK3Q8IV63 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
VRK3Q8IV63 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VRK3Q8IV63 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
VRK3Q8IV63 RNY4P6-201ENST00000363667 96 ntBASIC2.08□□□□□ -2.08
VRK3Q8IV63 Y_RNA.348-201ENST00000365403 103 ntBASIC2.08□□□□□ -2.08
VRK3Q8IV63 RNU6-905P-201ENST00000384434 107 ntBASIC2.08□□□□□ -2.08
VRK3Q8IV63 MIR802-201ENST00000390235 94 ntBASIC2.08□□□□□ -2.08
VRK3Q8IV63 SNORA11.4-201ENST00000408823 129 ntBASIC2.08□□□□□ -2.08
VRK3Q8IV63 AL445646.1-201ENST00000431784 216 ntBASIC2.08□□□□□ -2.08
VRK3Q8IV63 AC087499.4-201ENST00000448505 178 ntBASIC2.08□□□□□ -2.08
VRK3Q8IV63 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.08□□□□□ -2.08
VRK3Q8IV63 RNU6-537P-201ENST00000517277 103 ntBASIC2.08□□□□□ -2.08
VRK3Q8IV63 MIR1273D-201ENST00000577266 86 ntBASIC2.08□□□□□ -2.08
VRK3Q8IV63 MIR6132-201ENST00000622083 109 ntBASIC2.08□□□□□ -2.08
VRK3Q8IV63 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
VRK3Q8IV63 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
VRK3Q8IV63 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms