Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 Y_RNA.71-201ENST00000362892 104 ntBASIC2.52□□□□□ -2.01
RUFY4Q6ZNE9 Y_RNA.127-201ENST00000363386 109 ntBASIC2.52□□□□□ -2.01
RUFY4Q6ZNE9 RNU6-833P-201ENST00000363486 107 ntBASIC2.52□□□□□ -2.01
RUFY4Q6ZNE9 RNU6-163P-201ENST00000384396 106 ntBASIC2.52□□□□□ -2.01
RUFY4Q6ZNE9 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
RUFY4Q6ZNE9 MIR524-201ENST00000385242 87 ntBASIC2.52□□□□□ -2.01
RUFY4Q6ZNE9 HSPE1P9-201ENST00000440046 311 ntBASIC2.52□□□□□ -2.01
RUFY4Q6ZNE9 RNU7-193P-201ENST00000516723 65 ntBASIC2.52□□□□□ -2.01
RUFY4Q6ZNE9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.52□□□□□ -2.01
RUFY4Q6ZNE9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RUFY4Q6ZNE9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 Y_RNA.52-201ENST00000362760 96 ntBASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 RNU6-424P-201ENST00000384367 105 ntBASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 SNORD38C-201ENST00000384381 69 ntBASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 SNORA64-201ENST00000384674 134 ntBASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 CYCSP49-201ENST00000420810 319 ntBASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 RPL23AP42-201ENST00000471152 471 ntBASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 RPL23AP63-201ENST00000498752 471 ntBASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 AC114811.1-201ENST00000507207 168 ntBASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 RNU4-57P-201ENST00000515980 135 ntBASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 RN7SKP179-201ENST00000516126 217 ntBASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 AL442644.1-201ENST00000454390 3105 ntBASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RUFY4Q6ZNE9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 U8.1-201ENST00000362843 134 ntBASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 Y_RNA.218-201ENST00000364218 104 ntBASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 MIR221-201ENST00000385135 110 ntBASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 SNORD77.3-201ENST00000391113 65 ntBASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 AC087499.4-201ENST00000448505 178 ntBASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 RNU6-830P-201ENST00000516353 107 ntBASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 RNU6-548P-201ENST00000517083 115 ntBASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 RNA5SP437-201ENST00000517249 129 ntBASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 RNU2-19P-201ENST00000517288 84 ntBASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 MIR4709-201ENST00000577272 72 ntBASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 AL365222.1-201ENST00000614661 98 ntBASIC2.5□□□□□ -2.01
RUFY4Q6ZNE9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 SNORD115-28-201ENST00000363931 81 ntBASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 SNORA67.3-201ENST00000384366 140 ntBASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 MIR764-201ENST00000390811 85 ntBASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 AF228730.3-201ENST00000436691 102 ntBASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 snoU13.27-201ENST00000459278 104 ntBASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 MIR3121-201ENST00000579680 77 ntBASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 AL353997.5-201ENST00000618886 171 ntBASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 AL513423.1-201ENST00000621695 132 ntBASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.49□□□□□ -2.01
RUFY4Q6ZNE9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 RNA5SP205-201ENST00000364653 136 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 SNORA4.2-201ENST00000365313 147 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 SNORA22C-201ENST00000384614 134 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 Y_RNA.547-201ENST00000384654 119 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 AL023284.1-201ENST00000403956 276 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 RNA5SP100-201ENST00000410903 110 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 RNA5SP59-201ENST00000410922 110 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 Y_RNA.690-201ENST00000516603 95 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 RNA5SP168-201ENST00000516642 112 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 AC090049.2-201ENST00000550377 109 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 MIR5194-201ENST00000582634 120 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 MIR5197-201ENST00000583721 112 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 MIR6766-201ENST00000622641 72 ntBASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.48□□□□□ -2.01
RUFY4Q6ZNE9 RNU6-360P-201ENST00000390944 104 ntBASIC2.47□□□□□ -2.01
RUFY4Q6ZNE9 U8.16-201ENST00000391279 133 ntBASIC2.47□□□□□ -2.01
RUFY4Q6ZNE9 CALM2P4-201ENST00000430810 426 ntBASIC2.47□□□□□ -2.01
RUFY4Q6ZNE9 RNU7-25P-201ENST00000516544 62 ntBASIC2.47□□□□□ -2.01
RUFY4Q6ZNE9 Y_RNA.686-201ENST00000516548 134 ntBASIC2.47□□□□□ -2.01
RUFY4Q6ZNE9 RNU2-60P-201ENST00000517290 128 ntBASIC2.47□□□□□ -2.01
RUFY4Q6ZNE9 IGLV3-17-201ENST00000519099 244 ntBASIC2.47□□□□□ -2.01
RUFY4Q6ZNE9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.47□□□□□ -2.01
RUFY4Q6ZNE9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RUFY4Q6ZNE9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RUFY4Q6ZNE9 AC008555.8-201ENST00000623602 2168 ntBASIC2.46□□□□□ -2.02
RUFY4Q6ZNE9 Y_RNA.280-201ENST00000364765 112 ntBASIC2.46□□□□□ -2.02
RUFY4Q6ZNE9 RNU6-1189P-201ENST00000383958 107 ntBASIC2.46□□□□□ -2.02
RUFY4Q6ZNE9 SNORD23.1-201ENST00000408212 104 ntBASIC2.46□□□□□ -2.02
RUFY4Q6ZNE9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.46□□□□□ -2.02
RUFY4Q6ZNE9 AC055731.1-201ENST00000474387 401 ntBASIC2.46□□□□□ -2.02
RUFY4Q6ZNE9 RNU6-1333P-201ENST00000516162 93 ntBASIC2.46□□□□□ -2.02
RUFY4Q6ZNE9 Y_RNA.676-201ENST00000516393 96 ntBASIC2.46□□□□□ -2.02
RUFY4Q6ZNE9 RNU6-113P-201ENST00000516653 101 ntBASIC2.46□□□□□ -2.02
RUFY4Q6ZNE9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.46□□□□□ -2.02
RUFY4Q6ZNE9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.46□□□□□ -2.02
RUFY4Q6ZNE9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
RUFY4Q6ZNE9 Y_RNA.37-201ENST00000362606 108 ntBASIC2.45□□□□□ -2.02
RUFY4Q6ZNE9 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.45□□□□□ -2.02
RUFY4Q6ZNE9 AL445646.1-201ENST00000431784 216 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms