Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 MIR516B2-201ENST00000385190 85 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 RNU6-972P-201ENST00000391208 107 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 RNU6-887P-201ENST00000410660 100 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 RNA5SP217-201ENST00000515959 91 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 Y_RNA.659-201ENST00000515994 113 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 RNU1-95P-201ENST00000516357 160 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 RNU1-128P-201ENST00000516704 160 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 YPEL5P3-201ENST00000547227 352 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.55□□□□□ -2
CDPF1Q6NVV7 MIR5187-201ENST00000583479 76 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 MIR4439-201ENST00000583746 80 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 SNORA62.6-201ENST00000606322 83 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 U3.45-201ENST00000607547 219 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 AC022202.1-201ENST00000613515 211 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 AL121772.2-201ENST00000614331 297 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 MIR6717-201ENST00000622747 73 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 AC009093.8-201ENST00000641769 292 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CDPF1Q6NVV7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CDPF1Q6NVV7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CDPF1Q6NVV7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CDPF1Q6NVV7 RNU6-1313P-201ENST00000362622 102 ntBASIC2.54□□□□□ -2
CDPF1Q6NVV7 Y_RNA.190-201ENST00000363964 101 ntBASIC2.54□□□□□ -2
CDPF1Q6NVV7 MIR34B-201ENST00000385076 84 ntBASIC2.54□□□□□ -2
CDPF1Q6NVV7 MIR1255A-201ENST00000408338 113 ntBASIC2.54□□□□□ -2
CDPF1Q6NVV7 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
CDPF1Q6NVV7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.54□□□□□ -2
CDPF1Q6NVV7 RNU7-73P-201ENST00000458743 63 ntBASIC2.54□□□□□ -2
CDPF1Q6NVV7 SNORD105B-201ENST00000458770 79 ntBASIC2.54□□□□□ -2
CDPF1Q6NVV7 AP004217.1-201ENST00000480579 346 ntBASIC2.54□□□□□ -2
CDPF1Q6NVV7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.54□□□□□ -2
CDPF1Q6NVV7 AC096720.1-201ENST00000604441 183 ntBASIC2.54□□□□□ -2
CDPF1Q6NVV7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.54□□□□□ -2
CDPF1Q6NVV7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CDPF1Q6NVV7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.54□□□□□ -2
CDPF1Q6NVV7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
CDPF1Q6NVV7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
CDPF1Q6NVV7 RNA5SP124-201ENST00000362739 110 ntBASIC2.53□□□□□ -2
CDPF1Q6NVV7 RNU6-525P-201ENST00000363685 104 ntBASIC2.53□□□□□ -2
CDPF1Q6NVV7 SNORD115-35-201ENST00000365122 82 ntBASIC2.53□□□□□ -2
CDPF1Q6NVV7 MIR483-201ENST00000385070 76 ntBASIC2.53□□□□□ -2
CDPF1Q6NVV7 RNA5SP225-201ENST00000410874 135 ntBASIC2.53□□□□□ -2
CDPF1Q6NVV7 RPS29P4-201ENST00000414733 161 ntBASIC2.53□□□□□ -2
CDPF1Q6NVV7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.53□□□□□ -2
CDPF1Q6NVV7 MIR3126-201ENST00000577443 74 ntBASIC2.53□□□□□ -2
CDPF1Q6NVV7 AL020996.3-201ENST00000606617 222 ntBASIC2.53□□□□□ -2
CDPF1Q6NVV7 AL512310.12-203ENST00000640543 90 ntBASIC2.53□□□□□ -2
CDPF1Q6NVV7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDPF1Q6NVV7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CDPF1Q6NVV7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CDPF1Q6NVV7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CDPF1Q6NVV7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.53□□□□□ -2.01
CDPF1Q6NVV7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 Y_RNA.73-201ENST00000362910 113 ntBASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 SNORA1.1-201ENST00000364671 133 ntBASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 RNU6-497P-201ENST00000365316 104 ntBASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 RNU6-979P-201ENST00000383896 107 ntBASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 Y_RNA.467-201ENST00000384297 102 ntBASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 RNU6-402P-201ENST00000410678 103 ntBASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 RNU2-40P-201ENST00000410833 196 ntBASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 RNU7-34P-201ENST00000459394 64 ntBASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 MIR4791-201ENST00000607666 84 ntBASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDPF1Q6NVV7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 RNU1-148P-201ENST00000384472 162 ntBASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 RNA5SP424-201ENST00000390988 115 ntBASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 RNU11-3P-201ENST00000391111 133 ntBASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 HMGN2P35-201ENST00000412164 270 ntBASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 AC108729.3-201ENST00000513484 108 ntBASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 RNU2-27P-201ENST00000516185 142 ntBASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 RNA5SP137-201ENST00000516833 135 ntBASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 MIR548AR-201ENST00000582191 57 ntBASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 MIR7851-201ENST00000610611 160 ntBASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 AC243994.1-201ENST00000618627 109 ntBASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDPF1Q6NVV7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 RNU6-219P-201ENST00000364728 107 ntBASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 Y_RNA.333-201ENST00000365274 102 ntBASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 MIR597-201ENST00000384968 97 ntBASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 MIR218-2-201ENST00000385006 110 ntBASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 RNU6-913P-201ENST00000390913 95 ntBASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 RNU6-1190P-201ENST00000410811 104 ntBASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 RPL32P35-201ENST00000415214 394 ntBASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 AL035423.1-201ENST00000420331 213 ntBASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 AC115115.1-201ENST00000449927 248 ntBASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 MIR5588-201ENST00000581890 63 ntBASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDPF1Q6NVV7 RNU1-70P-201ENST00000362618 164 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms