Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AC022695.1-201ENST00000522089 237 ntBASIC5.19□□□□□ -1.58
NCBP3Q53F19 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NCBP3Q53F19 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.19□□□□□ -1.58
NCBP3Q53F19 AL356274.2-201ENST00000624379 3752 ntBASIC5.18□□□□□ -1.58
NCBP3Q53F19 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NCBP3Q53F19 SNORD56.5-201ENST00000364281 72 ntBASIC5.18□□□□□ -1.58
NCBP3Q53F19 Y_RNA.264-201ENST00000364665 102 ntBASIC5.18□□□□□ -1.58
NCBP3Q53F19 MIR29C-201ENST00000385231 88 ntBASIC5.18□□□□□ -1.58
NCBP3Q53F19 SNORA48.7-201ENST00000391302 135 ntBASIC5.18□□□□□ -1.58
NCBP3Q53F19 AC019129.1-201ENST00000403786 261 ntBASIC5.18□□□□□ -1.58
NCBP3Q53F19 UBBP3-201ENST00000445497 241 ntBASIC5.18□□□□□ -1.58
NCBP3Q53F19 AC005908.1-201ENST00000468701 347 ntBASIC5.18□□□□□ -1.58
NCBP3Q53F19 RNU7-43P-201ENST00000516554 64 ntBASIC5.18□□□□□ -1.58
NCBP3Q53F19 MIR92B-201ENST00000607575 96 ntBASIC5.18□□□□□ -1.58
NCBP3Q53F19 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NCBP3Q53F19 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NCBP3Q53F19 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NCBP3Q53F19 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NCBP3Q53F19 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NCBP3Q53F19 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NCBP3Q53F19 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
NCBP3Q53F19 SPRR2C-201ENST00000290702 219 ntBASIC5.17□□□□□ -1.58
NCBP3Q53F19 RNU6-208P-201ENST00000362431 107 ntBASIC5.17□□□□□ -1.58
NCBP3Q53F19 MIR597-201ENST00000384968 97 ntBASIC5.17□□□□□ -1.58
NCBP3Q53F19 MIR4764-201ENST00000580680 88 ntBASIC5.17□□□□□ -1.58
NCBP3Q53F19 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.17□□□□□ -1.58
NCBP3Q53F19 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
NCBP3Q53F19 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.17□□□□□ -1.58
NCBP3Q53F19 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NCBP3Q53F19 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NCBP3Q53F19 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
NCBP3Q53F19 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
NCBP3Q53F19 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NCBP3Q53F19 MIR134-201ENST00000385258 73 ntBASIC5.16□□□□□ -1.58
NCBP3Q53F19 RNA5SP39-201ENST00000411245 120 ntBASIC5.16□□□□□ -1.58
NCBP3Q53F19 AC015818.7-201ENST00000428754 109 ntBASIC5.16□□□□□ -1.58
NCBP3Q53F19 AC091153.1-201ENST00000466297 402 ntBASIC5.16□□□□□ -1.58
NCBP3Q53F19 RNU6-303P-201ENST00000517091 106 ntBASIC5.16□□□□□ -1.58
NCBP3Q53F19 AC091167.4-201ENST00000605079 184 ntBASIC5.16□□□□□ -1.58
NCBP3Q53F19 SCARNA4.1-201ENST00000628597 123 ntBASIC5.16□□□□□ -1.58
NCBP3Q53F19 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.16□□□□□ -1.58
NCBP3Q53F19 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
NCBP3Q53F19 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
NCBP3Q53F19 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
NCBP3Q53F19 BX276092.1-201ENST00000427368 251 ntBASIC5.15□□□□□ -1.59
NCBP3Q53F19 SNORA31.26-201ENST00000517250 137 ntBASIC5.15□□□□□ -1.59
NCBP3Q53F19 RNA5SP179-201ENST00000517284 121 ntBASIC5.15□□□□□ -1.59
NCBP3Q53F19 MIR4709-201ENST00000577272 72 ntBASIC5.15□□□□□ -1.59
NCBP3Q53F19 AL662814.1-201ENST00000617364 121 ntBASIC5.15□□□□□ -1.59
NCBP3Q53F19 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC5.15□□□□□ -1.59
NCBP3Q53F19 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
NCBP3Q53F19 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NCBP3Q53F19 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NCBP3Q53F19 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NCBP3Q53F19 RNA5SP72-201ENST00000364442 117 ntBASIC5.14□□□□□ -1.59
NCBP3Q53F19 RNU6-132P-201ENST00000383863 107 ntBASIC5.14□□□□□ -1.59
NCBP3Q53F19 MIR520H-201ENST00000385126 88 ntBASIC5.14□□□□□ -1.59
NCBP3Q53F19 RNU11-3P-201ENST00000391111 133 ntBASIC5.14□□□□□ -1.59
NCBP3Q53F19 RNU4ATAC9P-201ENST00000517146 126 ntBASIC5.14□□□□□ -1.59
NCBP3Q53F19 AC138749.4-201ENST00000563970 127 ntBASIC5.14□□□□□ -1.59
NCBP3Q53F19 AC104996.3-201ENST00000590718 94 ntBASIC5.14□□□□□ -1.59
NCBP3Q53F19 AC067747.1-201ENST00000608026 250 ntBASIC5.14□□□□□ -1.59
NCBP3Q53F19 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NCBP3Q53F19 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
NCBP3Q53F19 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC5.13□□□□□ -1.59
NCBP3Q53F19 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC5.13□□□□□ -1.59
NCBP3Q53F19 AC027290.2-201ENST00000623210 18662 ntBASIC5.13□□□□□ -1.59
NCBP3Q53F19 RNU1-18P-201ENST00000363062 164 ntBASIC5.13□□□□□ -1.59
NCBP3Q53F19 RNU6-571P-201ENST00000384128 107 ntBASIC5.13□□□□□ -1.59
NCBP3Q53F19 RNU6-296P-201ENST00000384608 107 ntBASIC5.13□□□□□ -1.59
NCBP3Q53F19 AL117339.2-201ENST00000430475 180 ntBASIC5.13□□□□□ -1.59
NCBP3Q53F19 RNU6-56P-201ENST00000516986 93 ntBASIC5.13□□□□□ -1.59
NCBP3Q53F19 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.13□□□□□ -1.59
NCBP3Q53F19 AL360157.1-201ENST00000565962 87 ntBASIC5.13□□□□□ -1.59
NCBP3Q53F19 MIR3064-201ENST00000581130 66 ntBASIC5.13□□□□□ -1.59
NCBP3Q53F19 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NCBP3Q53F19 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NCBP3Q53F19 MIR423-201ENST00000362201 94 ntBASIC5.12□□□□□ -1.59
NCBP3Q53F19 RNU6-949P-201ENST00000384040 107 ntBASIC5.12□□□□□ -1.59
NCBP3Q53F19 MIR520C-201ENST00000385005 87 ntBASIC5.12□□□□□ -1.59
NCBP3Q53F19 MIR154-201ENST00000385243 84 ntBASIC5.12□□□□□ -1.59
NCBP3Q53F19 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NCBP3Q53F19 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NCBP3Q53F19 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC5.12□□□□□ -1.59
NCBP3Q53F19 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NCBP3Q53F19 MIR372-201ENST00000362225 67 ntBASIC5.11□□□□□ -1.59
NCBP3Q53F19 RNU6-1241P-201ENST00000384536 107 ntBASIC5.11□□□□□ -1.59
NCBP3Q53F19 MIR520A-201ENST00000384862 85 ntBASIC5.11□□□□□ -1.59
NCBP3Q53F19 AC074348.1-201ENST00000426503 132 ntBASIC5.11□□□□□ -1.59
NCBP3Q53F19 SNORA84-201ENST00000459229 133 ntBASIC5.11□□□□□ -1.59
NCBP3Q53F19 RNA5SP164-201ENST00000516533 110 ntBASIC5.11□□□□□ -1.59
NCBP3Q53F19 RNA5SP437-201ENST00000517249 129 ntBASIC5.11□□□□□ -1.59
NCBP3Q53F19 AC023632.4-201ENST00000517783 191 ntBASIC5.11□□□□□ -1.59
NCBP3Q53F19 U6.109-201ENST00000636749 87 ntBASIC5.11□□□□□ -1.59
NCBP3Q53F19 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCBP3Q53F19 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCBP3Q53F19 AP006437.1-201ENST00000641440 3685 ntBASIC5.11□□□□□ -1.59
NCBP3Q53F19 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NCBP3Q53F19 RNU6-471P-201ENST00000383944 106 ntBASIC5.1□□□□□ -1.59
NCBP3Q53F19 Y_RNA.491-201ENST00000384417 107 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms