Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MIR517C-201ENST00000385103 95 ntBASIC1.37□□□□□ -2.19
CLDN20P56880 SNORD72-201ENST00000390994 80 ntBASIC1.37□□□□□ -2.19
CLDN20P56880 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
CLDN20P56880 Y_RNA.587-201ENST00000391210 103 ntBASIC1.37□□□□□ -2.19
CLDN20P56880 RNU4-62P-201ENST00000410125 130 ntBASIC1.37□□□□□ -2.19
CLDN20P56880 SNRPGP14-201ENST00000435400 219 ntBASIC1.37□□□□□ -2.19
CLDN20P56880 AC015922.2-201ENST00000435593 184 ntBASIC1.37□□□□□ -2.19
CLDN20P56880 RNU6-126P-201ENST00000516685 103 ntBASIC1.37□□□□□ -2.19
CLDN20P56880 AC141273.2-201ENST00000618989 130 ntBASIC1.37□□□□□ -2.19
CLDN20P56880 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CLDN20P56880 Y_RNA.199-201ENST00000364014 102 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 Y_RNA.200-201ENST00000364018 102 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 Y_RNA.308-201ENST00000365043 101 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 SNORD38C-201ENST00000384381 69 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 MIR15B-201ENST00000385045 98 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 MIR136-201ENST00000385207 82 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 RNU6-1228P-201ENST00000391014 107 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 AL451046.2-201ENST00000403074 277 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 RPS27P16-201ENST00000425758 201 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 RNA5SP458-201ENST00000516188 119 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 AC090142.3-201ENST00000519012 385 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 FAM106DP-201ENST00000586416 501 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 AC006441.5-201ENST00000612680 209 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 AP000648.3-201ENST00000623539 4507 ntBASIC1.36□□□□□ -2.19
CLDN20P56880 RNU6-103P-201ENST00000363686 107 ntBASIC1.35□□□□□ -2.19
CLDN20P56880 RNU6-268P-201ENST00000364174 107 ntBASIC1.35□□□□□ -2.19
CLDN20P56880 Y_RNA.515-201ENST00000384535 112 ntBASIC1.35□□□□□ -2.19
CLDN20P56880 Y_RNA.552-201ENST00000384665 112 ntBASIC1.35□□□□□ -2.19
CLDN20P56880 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
CLDN20P56880 RNU2-55P-201ENST00000411146 174 ntBASIC1.35□□□□□ -2.19
CLDN20P56880 RPL30P7-201ENST00000479312 323 ntBASIC1.35□□□□□ -2.19
CLDN20P56880 SCARNA8-201ENST00000515924 131 ntBASIC1.35□□□□□ -2.19
CLDN20P56880 RNY3P16-201ENST00000516338 101 ntBASIC1.35□□□□□ -2.19
CLDN20P56880 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLDN20P56880 Pinc.1-201ENST00000616452 154 ntBASIC1.35□□□□□ -2.19
CLDN20P56880 AL121890.5-201ENST00000620848 304 ntBASIC1.35□□□□□ -2.19
CLDN20P56880 AL442644.1-201ENST00000454390 3105 ntBASIC1.34□□□□□ -2.19
CLDN20P56880 MIR516B2-201ENST00000385190 85 ntBASIC1.34□□□□□ -2.19
CLDN20P56880 SNORD41-201ENST00000386967 70 ntBASIC1.34□□□□□ -2.19
CLDN20P56880 MT-TT-201ENST00000387460 66 ntBASIC1.34□□□□□ -2.19
CLDN20P56880 AL606845.1-201ENST00000404881 255 ntBASIC1.34□□□□□ -2.19
CLDN20P56880 AL354695.1-201ENST00000427935 228 ntBASIC1.34□□□□□ -2.19
CLDN20P56880 AL603825.1-201ENST00000438481 80 ntBASIC1.34□□□□□ -2.19
CLDN20P56880 RNU6-922P-201ENST00000516753 99 ntBASIC1.34□□□□□ -2.19
CLDN20P56880 RNU6-453P-201ENST00000516819 85 ntBASIC1.34□□□□□ -2.19
CLDN20P56880 SNORA31.24-201ENST00000517232 57 ntBASIC1.34□□□□□ -2.19
CLDN20P56880 AL357312.1-201ENST00000603879 298 ntBASIC1.34□□□□□ -2.19
CLDN20P56880 GHRLOS.1-201ENST00000610995 70 ntBASIC1.34□□□□□ -2.19
CLDN20P56880 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CLDN20P56880 MIR411-201ENST00000362239 96 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 Y_RNA.83-201ENST00000363005 113 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 SNORA26-201ENST00000391286 122 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 RNU6-493P-201ENST00000391321 108 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 BTF3P4-201ENST00000418852 495 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 RNU1-98P-201ENST00000458992 160 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 AC023790.1-201ENST00000482174 347 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 RNU6-830P-201ENST00000516353 107 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 RNU6-388P-201ENST00000517012 105 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 RNU6-389P-201ENST00000517048 105 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 AL512310.8-201ENST00000550183 120 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.33□□□□□ -2.2
CLDN20P56880 AC130289.1-201ENST00000577321 73 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 Z83818.1-201ENST00000603584 150 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 AC078938.1-201ENST00000620993 318 ntBASIC1.33□□□□□ -2.2
CLDN20P56880 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CLDN20P56880 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CLDN20P56880 MIR378A-201ENST00000362177 66 ntBASIC1.32□□□□□ -2.2
CLDN20P56880 Y_RNA.7-201ENST00000362352 102 ntBASIC1.32□□□□□ -2.2
CLDN20P56880 Y_RNA.121-201ENST00000363309 113 ntBASIC1.32□□□□□ -2.2
CLDN20P56880 RNU6-1299P-201ENST00000516316 100 ntBASIC1.32□□□□□ -2.2
CLDN20P56880 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
CLDN20P56880 MIR3664-201ENST00000579074 99 ntBASIC1.32□□□□□ -2.2
CLDN20P56880 Y_RNA.238-201ENST00000364441 102 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 RNU6-923P-201ENST00000364753 107 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 RNU6-728P-201ENST00000365375 104 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 RNU6-484P-201ENST00000384016 107 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 Y_RNA.432-201ENST00000384087 111 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 Y_RNA.486-201ENST00000384398 107 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 RNU7-95P-201ENST00000459222 64 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 SNORA74.3-201ENST00000517108 154 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 RNU6-365P-201ENST00000517113 106 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 DNAJC19P9-201ENST00000555084 351 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 MIR4308-201ENST00000580634 81 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 MIR4744-201ENST00000581563 82 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 AL512598.1-201ENST00000610158 273 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
CLDN20P56880 Y_RNA.571-201ENST00000384753 98 ntBASIC1.3□□□□□ -2.2
CLDN20P56880 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CLDN20P56880 Y_RNA.622-201ENST00000411091 108 ntBASIC1.3□□□□□ -2.2
CLDN20P56880 AP1B1P2-201ENST00000416196 106 ntBASIC1.3□□□□□ -2.2
CLDN20P56880 SNRPGP8-201ENST00000454064 226 ntBASIC1.3□□□□□ -2.2
CLDN20P56880 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDN20P56880 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.3□□□□□ -2.2
CLDN20P56880 RNA5SP153-201ENST00000516498 76 ntBASIC1.3□□□□□ -2.2
CLDN20P56880 AL160236.1-201ENST00000556317 195 ntBASIC1.3□□□□□ -2.2
CLDN20P56880 RNU2-4P-201ENST00000606190 192 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 244.5 ms