Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNU6-861P-201ENST00000516745 106 ntBASIC1.83□□□□□ -2.12
COPAP53621 RNU6-250P-201ENST00000516958 103 ntBASIC1.83□□□□□ -2.12
COPAP53621 AC109810.1-201ENST00000534066 224 ntBASIC1.83□□□□□ -2.12
COPAP53621 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.83□□□□□ -2.12
COPAP53621 Pinc.1-201ENST00000616452 154 ntBASIC1.83□□□□□ -2.12
COPAP53621 MIRLET7C-201ENST00000362160 84 ntBASIC1.82□□□□□ -2.12
COPAP53621 SNORA16.1-201ENST00000364597 132 ntBASIC1.82□□□□□ -2.12
COPAP53621 RNU6-275P-201ENST00000364910 107 ntBASIC1.82□□□□□ -2.12
COPAP53621 RNU6-1138P-201ENST00000365359 106 ntBASIC1.82□□□□□ -2.12
COPAP53621 Y_RNA.412-201ENST00000384001 104 ntBASIC1.82□□□□□ -2.12
COPAP53621 MIR194-1-201ENST00000384892 85 ntBASIC1.82□□□□□ -2.12
COPAP53621 AC108667.1-201ENST00000428618 249 ntBASIC1.82□□□□□ -2.12
COPAP53621 RNU6-1219P-201ENST00000516143 112 ntBASIC1.82□□□□□ -2.12
COPAP53621 RNU6-1299P-201ENST00000516316 100 ntBASIC1.82□□□□□ -2.12
COPAP53621 SNORA25.15-201ENST00000516487 89 ntBASIC1.82□□□□□ -2.12
COPAP53621 SNORD45.4-201ENST00000516629 73 ntBASIC1.82□□□□□ -2.12
COPAP53621 SUMO2P16-201ENST00000519475 264 ntBASIC1.82□□□□□ -2.12
COPAP53621 MRPS18CP4-201ENST00000535821 231 ntBASIC1.82□□□□□ -2.12
COPAP53621 MIR4778-201ENST00000577635 80 ntBASIC1.82□□□□□ -2.12
COPAP53621 SNORA77B-201ENST00000578179 125 ntBASIC1.82□□□□□ -2.12
COPAP53621 AC008507.4-201ENST00000585464 127 ntBASIC1.82□□□□□ -2.12
COPAP53621 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.82□□□□□ -2.12
COPAP53621 MIR8081-201ENST00000611533 95 ntBASIC1.82□□□□□ -2.12
COPAP53621 FTX_2.1-201ENST00000618816 94 ntBASIC1.82□□□□□ -2.12
COPAP53621 AC027279.3-201ENST00000625055 122 ntBASIC1.82□□□□□ -2.12
COPAP53621 U6.106-201ENST00000636360 105 ntBASIC1.82□□□□□ -2.12
COPAP53621 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
COPAP53621 SNORD50B-201ENST00000364995 70 ntBASIC1.81□□□□□ -2.12
COPAP53621 RNU6-442P-201ENST00000383968 104 ntBASIC1.81□□□□□ -2.12
COPAP53621 Y_RNA.432-201ENST00000384087 111 ntBASIC1.81□□□□□ -2.12
COPAP53621 MIR15B-201ENST00000385045 98 ntBASIC1.81□□□□□ -2.12
COPAP53621 SNORA26-201ENST00000391286 122 ntBASIC1.81□□□□□ -2.12
COPAP53621 MIR891A-201ENST00000401237 79 ntBASIC1.81□□□□□ -2.12
COPAP53621 AL161935.2-201ENST00000414627 60 ntBASIC1.81□□□□□ -2.12
COPAP53621 AC114811.1-201ENST00000507207 168 ntBASIC1.81□□□□□ -2.12
COPAP53621 RNU6-970P-201ENST00000516312 107 ntBASIC1.81□□□□□ -2.12
COPAP53621 ICE2P2-201ENST00000483823 2787 ntBASIC1.81□□□□□ -2.12
COPAP53621 SNORD45.3-201ENST00000363836 72 ntBASIC1.8□□□□□ -2.12
COPAP53621 RNU6-682P-201ENST00000363843 106 ntBASIC1.8□□□□□ -2.12
COPAP53621 RNU6-457P-201ENST00000363999 107 ntBASIC1.8□□□□□ -2.12
COPAP53621 Y_RNA.240-201ENST00000364469 95 ntBASIC1.8□□□□□ -2.12
COPAP53621 RNU6-312P-201ENST00000364629 107 ntBASIC1.8□□□□□ -2.12
COPAP53621 Y_RNA.336-201ENST00000365307 109 ntBASIC1.8□□□□□ -2.12
COPAP53621 RNA5SP259-201ENST00000365541 109 ntBASIC1.8□□□□□ -2.12
COPAP53621 MIR513A1-201ENST00000385138 129 ntBASIC1.8□□□□□ -2.12
COPAP53621 SNORD72-201ENST00000390994 80 ntBASIC1.8□□□□□ -2.12
COPAP53621 RNU2-70P-201ENST00000410718 179 ntBASIC1.8□□□□□ -2.12
COPAP53621 AC093850.1-201ENST00000454121 251 ntBASIC1.8□□□□□ -2.12
COPAP53621 AC005908.1-201ENST00000468701 347 ntBASIC1.8□□□□□ -2.12
COPAP53621 MIR4255-201ENST00000579351 72 ntBASIC1.8□□□□□ -2.12
COPAP53621 MIR4422-201ENST00000581938 83 ntBASIC1.8□□□□□ -2.12
COPAP53621 MIR8063-201ENST00000621930 81 ntBASIC1.8□□□□□ -2.12
COPAP53621 Y_RNA.23-201ENST00000362496 106 ntBASIC1.79□□□□□ -2.12
COPAP53621 RNU6-833P-201ENST00000363486 107 ntBASIC1.79□□□□□ -2.12
COPAP53621 HSPE1P24-201ENST00000450782 238 ntBASIC1.79□□□□□ -2.12
COPAP53621 SNRPGP8-201ENST00000454064 226 ntBASIC1.79□□□□□ -2.12
COPAP53621 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
COPAP53621 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.12
COPAP53621 Y_RNA.150-201ENST00000363562 102 ntBASIC1.78□□□□□ -2.12
COPAP53621 Y_RNA.357-201ENST00000365487 109 ntBASIC1.78□□□□□ -2.12
COPAP53621 Y_RNA.555-201ENST00000384673 110 ntBASIC1.78□□□□□ -2.12
COPAP53621 RNU6-561P-201ENST00000516222 102 ntBASIC1.78□□□□□ -2.12
COPAP53621 MIR4419B-201ENST00000577260 68 ntBASIC1.78□□□□□ -2.12
COPAP53621 Y_RNA.338-201ENST00000365320 114 ntBASIC1.77□□□□□ -2.13
COPAP53621 RNU6-484P-201ENST00000384016 107 ntBASIC1.77□□□□□ -2.13
COPAP53621 RNU4-43P-201ENST00000410628 137 ntBASIC1.77□□□□□ -2.13
COPAP53621 RN7SKP51-201ENST00000410781 304 ntBASIC1.77□□□□□ -2.13
COPAP53621 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.77□□□□□ -2.13
COPAP53621 RNA5SP153-201ENST00000516498 76 ntBASIC1.77□□□□□ -2.13
COPAP53621 RNU6-365P-201ENST00000517113 106 ntBASIC1.77□□□□□ -2.13
COPAP53621 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.77□□□□□ -2.13
COPAP53621 MIR4431-201ENST00000579990 94 ntBASIC1.77□□□□□ -2.13
COPAP53621 MIR3618-201ENST00000580330 88 ntBASIC1.77□□□□□ -2.13
COPAP53621 AC106754.2-201ENST00000623006 233 ntBASIC1.77□□□□□ -2.13
COPAP53621 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.77□□□□□ -2.13
COPAP53621 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
COPAP53621 RNU6-199P-201ENST00000362954 107 ntBASIC1.76□□□□□ -2.13
COPAP53621 SNORD48-201ENST00000364953 64 ntBASIC1.76□□□□□ -2.13
COPAP53621 RNU6-886P-201ENST00000384319 105 ntBASIC1.76□□□□□ -2.13
COPAP53621 SNORD38C-201ENST00000384381 69 ntBASIC1.76□□□□□ -2.13
COPAP53621 Y_RNA.486-201ENST00000384398 107 ntBASIC1.76□□□□□ -2.13
COPAP53621 MIR452-201ENST00000385020 85 ntBASIC1.76□□□□□ -2.13
COPAP53621 MT-TR-201ENST00000387439 65 ntBASIC1.76□□□□□ -2.13
COPAP53621 SEPT7P4-201ENST00000437076 306 ntBASIC1.76□□□□□ -2.13
COPAP53621 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.76□□□□□ -2.13
COPAP53621 RNU6-197P-201ENST00000516680 100 ntBASIC1.76□□□□□ -2.13
COPAP53621 AL160236.1-201ENST00000556317 195 ntBASIC1.76□□□□□ -2.13
COPAP53621 MIR4498-201ENST00000577599 66 ntBASIC1.76□□□□□ -2.13
COPAP53621 AC015688.6-201ENST00000577737 104 ntBASIC1.76□□□□□ -2.13
COPAP53621 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.76□□□□□ -2.13
COPAP53621 Y_RNA.634-201ENST00000364811 113 ntBASIC1.75□□□□□ -2.13
COPAP53621 RNU6-643P-201ENST00000384018 107 ntBASIC1.75□□□□□ -2.13
COPAP53621 RNU6-209P-201ENST00000384118 107 ntBASIC1.75□□□□□ -2.13
COPAP53621 AC006461.1-201ENST00000412637 326 ntBASIC1.75□□□□□ -2.13
COPAP53621 AC005840.1-201ENST00000498412 377 ntBASIC1.75□□□□□ -2.13
COPAP53621 AC107027.2-201ENST00000512197 115 ntBASIC1.75□□□□□ -2.13
COPAP53621 Y_RNA.676-201ENST00000516393 96 ntBASIC1.75□□□□□ -2.13
COPAP53621 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.74□□□□□ -2.13
COPAP53621 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.74□□□□□ -2.13
COPAP53621 RNU1-78P-201ENST00000391248 165 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms