Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RNU11-5P-201ENST00000391216 129 ntBASIC1.47□□□□□ -2.17
CLK1P49759 RNU4-43P-201ENST00000410628 137 ntBASIC1.47□□□□□ -2.17
CLK1P49759 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.47□□□□□ -2.17
CLK1P49759 AC245047.3-201ENST00000429428 127 ntBASIC1.47□□□□□ -2.17
CLK1P49759 SNRPGP8-201ENST00000454064 226 ntBASIC1.47□□□□□ -2.17
CLK1P49759 HMGN1P7-201ENST00000491722 313 ntBASIC1.47□□□□□ -2.17
CLK1P49759 AC005840.1-201ENST00000498412 377 ntBASIC1.47□□□□□ -2.17
CLK1P49759 AC015688.6-201ENST00000577737 104 ntBASIC1.47□□□□□ -2.17
CLK1P49759 MIR4431-201ENST00000579990 94 ntBASIC1.47□□□□□ -2.17
CLK1P49759 AL049861.1-201ENST00000603130 150 ntBASIC1.47□□□□□ -2.17
CLK1P49759 MIR8065-201ENST00000620577 100 ntBASIC1.47□□□□□ -2.17
CLK1P49759 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CLK1P49759 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
CLK1P49759 SNORD45.3-201ENST00000363836 72 ntBASIC1.46□□□□□ -2.18
CLK1P49759 Y_RNA.398-201ENST00000383952 99 ntBASIC1.46□□□□□ -2.18
CLK1P49759 RNU6-125P-201ENST00000384505 107 ntBASIC1.46□□□□□ -2.18
CLK1P49759 Y_RNA.580-201ENST00000391004 95 ntBASIC1.46□□□□□ -2.18
CLK1P49759 SNORA67.5-201ENST00000391036 107 ntBASIC1.46□□□□□ -2.18
CLK1P49759 Y_RNA.587-201ENST00000391210 103 ntBASIC1.46□□□□□ -2.18
CLK1P49759 Y_RNA.621-201ENST00000411065 96 ntBASIC1.46□□□□□ -2.18
CLK1P49759 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.46□□□□□ -2.18
CLK1P49759 RNU7-121P-201ENST00000516604 62 ntBASIC1.46□□□□□ -2.18
CLK1P49759 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.46□□□□□ -2.18
CLK1P49759 MIR4709-201ENST00000577272 72 ntBASIC1.46□□□□□ -2.18
CLK1P49759 MIR2681-201ENST00000581814 105 ntBASIC1.46□□□□□ -2.18
CLK1P49759 uc_338.4-201ENST00000616635 176 ntBASIC1.46□□□□□ -2.18
CLK1P49759 MIR8054-201ENST00000620877 86 ntBASIC1.46□□□□□ -2.18
CLK1P49759 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.46□□□□□ -2.18
CLK1P49759 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CLK1P49759 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CLK1P49759 U8.5-201ENST00000364528 136 ntBASIC1.45□□□□□ -2.18
CLK1P49759 SNORA4.2-201ENST00000365313 147 ntBASIC1.45□□□□□ -2.18
CLK1P49759 RNU6-643P-201ENST00000384018 107 ntBASIC1.45□□□□□ -2.18
CLK1P49759 MIR522-201ENST00000385071 87 ntBASIC1.45□□□□□ -2.18
CLK1P49759 Y_RNA.622-201ENST00000411091 108 ntBASIC1.45□□□□□ -2.18
CLK1P49759 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.45□□□□□ -2.18
CLK1P49759 OR9P1P-201ENST00000496431 281 ntBASIC1.45□□□□□ -2.18
CLK1P49759 RNU7-200P-201ENST00000516105 62 ntBASIC1.45□□□□□ -2.18
CLK1P49759 RNU6-548P-201ENST00000517083 115 ntBASIC1.45□□□□□ -2.18
CLK1P49759 MIR4762-201ENST00000585261 75 ntBASIC1.45□□□□□ -2.18
CLK1P49759 RNU6-774P-201ENST00000363238 107 ntBASIC1.44□□□□□ -2.18
CLK1P49759 RNU6-818P-201ENST00000364837 108 ntBASIC1.44□□□□□ -2.18
CLK1P49759 RNU6-1138P-201ENST00000365359 106 ntBASIC1.44□□□□□ -2.18
CLK1P49759 RNU6-728P-201ENST00000365375 104 ntBASIC1.44□□□□□ -2.18
CLK1P49759 RNY1P5-201ENST00000383890 115 ntBASIC1.44□□□□□ -2.18
CLK1P49759 RNU6-746P-201ENST00000384112 109 ntBASIC1.44□□□□□ -2.18
CLK1P49759 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CLK1P49759 RNU6-440P-201ENST00000390882 105 ntBASIC1.44□□□□□ -2.18
CLK1P49759 RNU6-239P-201ENST00000390990 99 ntBASIC1.44□□□□□ -2.18
CLK1P49759 CYCSP49-201ENST00000420810 319 ntBASIC1.44□□□□□ -2.18
CLK1P49759 SNRPGP10-201ENST00000432323 225 ntBASIC1.44□□□□□ -2.18
CLK1P49759 AL121914.1-201ENST00000450188 156 ntBASIC1.44□□□□□ -2.18
CLK1P49759 AL049830.1-201ENST00000468034 425 ntBASIC1.44□□□□□ -2.18
CLK1P49759 RNU7-40P-201ENST00000516397 64 ntBASIC1.44□□□□□ -2.18
CLK1P49759 RNU2-56P-201ENST00000516826 190 ntBASIC1.44□□□□□ -2.18
CLK1P49759 AC008507.4-201ENST00000585464 127 ntBASIC1.44□□□□□ -2.18
CLK1P49759 AC097639.2-201ENST00000603159 172 ntBASIC1.44□□□□□ -2.18
CLK1P49759 MIR8081-201ENST00000611533 95 ntBASIC1.44□□□□□ -2.18
CLK1P49759 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.44□□□□□ -2.18
CLK1P49759 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CLK1P49759 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CLK1P49759 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CLK1P49759 MIRLET7C-201ENST00000362160 84 ntBASIC1.43□□□□□ -2.18
CLK1P49759 Y_RNA.8-201ENST00000362353 102 ntBASIC1.43□□□□□ -2.18
CLK1P49759 Y_RNA.91-201ENST00000363042 107 ntBASIC1.43□□□□□ -2.18
CLK1P49759 RNU6-950P-201ENST00000384651 107 ntBASIC1.43□□□□□ -2.18
CLK1P49759 MIR517C-201ENST00000385103 95 ntBASIC1.43□□□□□ -2.18
CLK1P49759 SNORD72-201ENST00000390994 80 ntBASIC1.43□□□□□ -2.18
CLK1P49759 RNU2-55P-201ENST00000411146 174 ntBASIC1.43□□□□□ -2.18
CLK1P49759 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.43□□□□□ -2.18
CLK1P49759 RNU7-149P-201ENST00000516739 59 ntBASIC1.43□□□□□ -2.18
CLK1P49759 MIR3133-201ENST00000583157 78 ntBASIC1.43□□□□□ -2.18
CLK1P49759 JPX_2.1-201ENST00000614161 69 ntBASIC1.43□□□□□ -2.18
CLK1P49759 AC095038.3-201ENST00000634439 195 ntBASIC1.43□□□□□ -2.18
CLK1P49759 RNA5SP190-201ENST00000365222 118 ntBASIC1.42□□□□□ -2.18
CLK1P49759 SNORD116-18-201ENST00000383961 92 ntBASIC1.42□□□□□ -2.18
CLK1P49759 Y_RNA.432-201ENST00000384087 111 ntBASIC1.42□□□□□ -2.18
CLK1P49759 RNU6-187P-201ENST00000384139 106 ntBASIC1.42□□□□□ -2.18
CLK1P49759 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
CLK1P49759 STAG3L5P-204ENST00000443759 179 ntBASIC1.42□□□□□ -2.18
CLK1P49759 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.42□□□□□ -2.18
CLK1P49759 AC107027.2-201ENST00000512197 115 ntBASIC1.42□□□□□ -2.18
CLK1P49759 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.42□□□□□ -2.18
CLK1P49759 RNU6-197P-201ENST00000516680 100 ntBASIC1.42□□□□□ -2.18
CLK1P49759 Y_RNA.703-201ENST00000516846 111 ntBASIC1.42□□□□□ -2.18
CLK1P49759 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
CLK1P49759 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.42□□□□□ -2.18
CLK1P49759 MIR3658-201ENST00000636291 56 ntBASIC1.42□□□□□ -2.18
CLK1P49759 AL442644.1-201ENST00000454390 3105 ntBASIC1.42□□□□□ -2.18
CLK1P49759 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
CLK1P49759 RNU6-978P-201ENST00000364371 103 ntBASIC1.41□□□□□ -2.18
CLK1P49759 SNORD50B-201ENST00000364995 70 ntBASIC1.41□□□□□ -2.18
CLK1P49759 Y_RNA.357-201ENST00000365487 109 ntBASIC1.41□□□□□ -2.18
CLK1P49759 Y_RNA.486-201ENST00000384398 107 ntBASIC1.41□□□□□ -2.18
CLK1P49759 RNA5SP482-201ENST00000391269 118 ntBASIC1.41□□□□□ -2.18
CLK1P49759 MIR548M-201ENST00000408260 86 ntBASIC1.41□□□□□ -2.18
CLK1P49759 AC006461.1-201ENST00000412637 326 ntBASIC1.41□□□□□ -2.18
CLK1P49759 AC004965.1-201ENST00000413033 213 ntBASIC1.41□□□□□ -2.18
CLK1P49759 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
CLK1P49759 AL591806.2-201ENST00000433122 173 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms