Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 MIR3937-201ENST00000580135 106 ntBASIC1.52□□□□□ -2.17
CENPAP49450 MIR4744-201ENST00000581563 82 ntBASIC1.52□□□□□ -2.17
CENPAP49450 FAM106DP-201ENST00000586416 501 ntBASIC1.52□□□□□ -2.17
CENPAP49450 AL365434.2-201ENST00000607979 234 ntBASIC1.52□□□□□ -2.17
CENPAP49450 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.52□□□□□ -2.17
CENPAP49450 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
CENPAP49450 SNORD33-201ENST00000362761 85 ntBASIC1.51□□□□□ -2.17
CENPAP49450 Y_RNA.182-201ENST00000363880 111 ntBASIC1.51□□□□□ -2.17
CENPAP49450 Y_RNA.238-201ENST00000364441 102 ntBASIC1.51□□□□□ -2.17
CENPAP49450 RNU6-1138P-201ENST00000365359 106 ntBASIC1.51□□□□□ -2.17
CENPAP49450 RNY3P5-201ENST00000384127 102 ntBASIC1.51□□□□□ -2.17
CENPAP49450 Y_RNA.571-201ENST00000384753 98 ntBASIC1.51□□□□□ -2.17
CENPAP49450 RNU1-78P-201ENST00000391248 165 ntBASIC1.51□□□□□ -2.17
CENPAP49450 SNORA26.9-201ENST00000391322 122 ntBASIC1.51□□□□□ -2.17
CENPAP49450 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.51□□□□□ -2.17
CENPAP49450 AL138752.1-201ENST00000452964 351 ntBASIC1.51□□□□□ -2.17
CENPAP49450 AC092991.1-201ENST00000477176 376 ntBASIC1.51□□□□□ -2.17
CENPAP49450 RNU6-322P-201ENST00000516010 103 ntBASIC1.51□□□□□ -2.17
CENPAP49450 RNU6-1299P-201ENST00000516316 100 ntBASIC1.51□□□□□ -2.17
CENPAP49450 MIR4662B-201ENST00000579498 81 ntBASIC1.51□□□□□ -2.17
CENPAP49450 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
CENPAP49450 RNU6-47P-201ENST00000383866 107 ntBASIC1.5□□□□□ -2.17
CENPAP49450 RNU6-1065P-201ENST00000384513 106 ntBASIC1.5□□□□□ -2.17
CENPAP49450 U8.13-201ENST00000390842 128 ntBASIC1.5□□□□□ -2.17
CENPAP49450 RNU2-70P-201ENST00000410718 179 ntBASIC1.5□□□□□ -2.17
CENPAP49450 SNX2P2-201ENST00000424553 323 ntBASIC1.5□□□□□ -2.17
CENPAP49450 MTND5P15-201ENST00000434246 349 ntBASIC1.5□□□□□ -2.17
CENPAP49450 AC015922.2-201ENST00000435593 184 ntBASIC1.5□□□□□ -2.17
CENPAP49450 AL121914.1-201ENST00000450188 156 ntBASIC1.5□□□□□ -2.17
CENPAP49450 Y_RNA.644-201ENST00000459006 113 ntBASIC1.5□□□□□ -2.17
CENPAP49450 Y_RNA.674-201ENST00000516362 113 ntBASIC1.5□□□□□ -2.17
CENPAP49450 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CENPAP49450 Y_RNA.121-201ENST00000363309 113 ntBASIC1.49□□□□□ -2.17
CENPAP49450 RNU6-268P-201ENST00000364174 107 ntBASIC1.49□□□□□ -2.17
CENPAP49450 RNU6-728P-201ENST00000365375 104 ntBASIC1.49□□□□□ -2.17
CENPAP49450 SNORA2.2-201ENST00000365473 135 ntBASIC1.49□□□□□ -2.17
CENPAP49450 Y_RNA.432-201ENST00000384087 111 ntBASIC1.49□□□□□ -2.17
CENPAP49450 Y_RNA.486-201ENST00000384398 107 ntBASIC1.49□□□□□ -2.17
CENPAP49450 MIR526A1-201ENST00000384897 85 ntBASIC1.49□□□□□ -2.17
CENPAP49450 MIR150-201ENST00000385048 84 ntBASIC1.49□□□□□ -2.17
CENPAP49450 MIR136-201ENST00000385207 82 ntBASIC1.49□□□□□ -2.17
CENPAP49450 SNORA79-201ENST00000408376 140 ntBASIC1.49□□□□□ -2.17
CENPAP49450 SNRPGP8-201ENST00000454064 226 ntBASIC1.49□□□□□ -2.17
CENPAP49450 RNU6-917P-201ENST00000516294 104 ntBASIC1.49□□□□□ -2.17
CENPAP49450 RNU6-922P-201ENST00000516753 99 ntBASIC1.49□□□□□ -2.17
CENPAP49450 AL160236.1-201ENST00000556317 195 ntBASIC1.49□□□□□ -2.17
CENPAP49450 AP001485.1-201ENST00000604799 199 ntBASIC1.49□□□□□ -2.17
CENPAP49450 MIR502-201ENST00000606349 86 ntBASIC1.49□□□□□ -2.17
CENPAP49450 AL353997.5-201ENST00000618886 171 ntBASIC1.49□□□□□ -2.17
CENPAP49450 SNORD26-201ENST00000384147 75 ntBASIC1.48□□□□□ -2.17
CENPAP49450 RNU6-578P-201ENST00000390980 103 ntBASIC1.48□□□□□ -2.17
CENPAP49450 RNU6-918P-201ENST00000391219 106 ntBASIC1.48□□□□□ -2.17
CENPAP49450 AL451046.2-201ENST00000403074 277 ntBASIC1.48□□□□□ -2.17
CENPAP49450 RNU2-55P-201ENST00000411146 174 ntBASIC1.48□□□□□ -2.17
CENPAP49450 RPS27P16-201ENST00000425758 201 ntBASIC1.48□□□□□ -2.17
CENPAP49450 AC245517.4-201ENST00000448601 281 ntBASIC1.48□□□□□ -2.17
CENPAP49450 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
CENPAP49450 RNU6-561P-201ENST00000516222 102 ntBASIC1.48□□□□□ -2.17
CENPAP49450 RNU6-126P-201ENST00000516685 103 ntBASIC1.48□□□□□ -2.17
CENPAP49450 RNU6-295P-201ENST00000516901 104 ntBASIC1.48□□□□□ -2.17
CENPAP49450 RNU6-548P-201ENST00000517083 115 ntBASIC1.48□□□□□ -2.17
CENPAP49450 RNU6-365P-201ENST00000517113 106 ntBASIC1.48□□□□□ -2.17
CENPAP49450 AC090142.3-201ENST00000519012 385 ntBASIC1.48□□□□□ -2.17
CENPAP49450 AC090049.2-201ENST00000550377 109 ntBASIC1.48□□□□□ -2.17
CENPAP49450 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.48□□□□□ -2.17
CENPAP49450 AC015726.2-201ENST00000620112 122 ntBASIC1.48□□□□□ -2.17
CENPAP49450 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CENPAP49450 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
CENPAP49450 SNORD45.3-201ENST00000363836 72 ntBASIC1.47□□□□□ -2.17
CENPAP49450 SNORA26-201ENST00000391286 122 ntBASIC1.47□□□□□ -2.17
CENPAP49450 Y_RNA.666-201ENST00000516187 112 ntBASIC1.47□□□□□ -2.17
CENPAP49450 AC109810.1-201ENST00000534066 224 ntBASIC1.47□□□□□ -2.17
CENPAP49450 AP002392.1-201ENST00000537692 208 ntBASIC1.47□□□□□ -2.17
CENPAP49450 AC108706.1-201ENST00000611053 297 ntBASIC1.47□□□□□ -2.17
CENPAP49450 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
CENPAP49450 Y_RNA.29-201ENST00000362570 113 ntBASIC1.46□□□□□ -2.18
CENPAP49450 MIR15B-201ENST00000385045 98 ntBASIC1.46□□□□□ -2.18
CENPAP49450 AC027119.1-201ENST00000440877 241 ntBASIC1.46□□□□□ -2.18
CENPAP49450 RNA5SP458-201ENST00000516188 119 ntBASIC1.46□□□□□ -2.18
CENPAP49450 SNORA25.15-201ENST00000516487 89 ntBASIC1.46□□□□□ -2.18
CENPAP49450 AC022559.1-201ENST00000520905 205 ntBASIC1.46□□□□□ -2.18
CENPAP49450 AL513534.2-201ENST00000603836 250 ntBASIC1.46□□□□□ -2.18
CENPAP49450 AC006441.5-201ENST00000612680 209 ntBASIC1.46□□□□□ -2.18
CENPAP49450 RNU6-484P-201ENST00000384016 107 ntBASIC1.45□□□□□ -2.18
CENPAP49450 MIR653-201ENST00000385279 96 ntBASIC1.45□□□□□ -2.18
CENPAP49450 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.45□□□□□ -2.18
CENPAP49450 MIR548O-201ENST00000408583 114 ntBASIC1.45□□□□□ -2.18
CENPAP49450 SNRPGP14-201ENST00000435400 219 ntBASIC1.45□□□□□ -2.18
CENPAP49450 SNRPGP13-201ENST00000442212 177 ntBASIC1.45□□□□□ -2.18
CENPAP49450 RNA5SP445-201ENST00000515889 115 ntBASIC1.45□□□□□ -2.18
CENPAP49450 SNORA18.7-201ENST00000516910 131 ntBASIC1.45□□□□□ -2.18
CENPAP49450 RNU6-250P-201ENST00000516958 103 ntBASIC1.45□□□□□ -2.18
CENPAP49450 SNORA81.3-201ENST00000517283 198 ntBASIC1.45□□□□□ -2.18
CENPAP49450 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CENPAP49450 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CENPAP49450 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CENPAP49450 Y_RNA.91-201ENST00000363042 107 ntBASIC1.44□□□□□ -2.18
CENPAP49450 RNA5SP99-201ENST00000364020 114 ntBASIC1.44□□□□□ -2.18
CENPAP49450 Y_RNA.233-201ENST00000364407 101 ntBASIC1.44□□□□□ -2.18
CENPAP49450 Y_RNA.634-201ENST00000364811 113 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 242.6 ms