Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 RNU6-275P-201ENST00000364910 107 ntBASIC1.82□□□□□ -2.12
HOXD12P35452 RNU6-728P-201ENST00000365375 104 ntBASIC1.82□□□□□ -2.12
HOXD12P35452 Y_RNA.555-201ENST00000384673 110 ntBASIC1.82□□□□□ -2.12
HOXD12P35452 SNRPGP8-201ENST00000454064 226 ntBASIC1.82□□□□□ -2.12
HOXD12P35452 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.82□□□□□ -2.12
HOXD12P35452 AC074198.2-201ENST00000508153 258 ntBASIC1.82□□□□□ -2.12
HOXD12P35452 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
HOXD12P35452 U8.5-201ENST00000364528 136 ntBASIC1.81□□□□□ -2.12
HOXD12P35452 RNU6-312P-201ENST00000364629 107 ntBASIC1.81□□□□□ -2.12
HOXD12P35452 MIR548I3-201ENST00000408378 149 ntBASIC1.81□□□□□ -2.12
HOXD12P35452 MIR548I1-201ENST00000408810 149 ntBASIC1.81□□□□□ -2.12
HOXD12P35452 AP1B1P2-201ENST00000416196 106 ntBASIC1.81□□□□□ -2.12
HOXD12P35452 SNORD77.4-201ENST00000516158 81 ntBASIC1.81□□□□□ -2.12
HOXD12P35452 RNU7-149P-201ENST00000516739 59 ntBASIC1.81□□□□□ -2.12
HOXD12P35452 MIR4762-201ENST00000585261 75 ntBASIC1.81□□□□□ -2.12
HOXD12P35452 Pinc.1-201ENST00000616452 154 ntBASIC1.81□□□□□ -2.12
HOXD12P35452 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
HOXD12P35452 SNORD50B-201ENST00000364995 70 ntBASIC1.8□□□□□ -2.12
HOXD12P35452 MIR15B-201ENST00000385045 98 ntBASIC1.8□□□□□ -2.12
HOXD12P35452 PCNPP3-201ENST00000393579 471 ntBASIC1.8□□□□□ -2.12
HOXD12P35452 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.8□□□□□ -2.12
HOXD12P35452 CALM2P4-201ENST00000430810 426 ntBASIC1.8□□□□□ -2.12
HOXD12P35452 HSPE1P24-201ENST00000450782 238 ntBASIC1.8□□□□□ -2.12
HOXD12P35452 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.8□□□□□ -2.12
HOXD12P35452 RNA5SP168-201ENST00000516642 112 ntBASIC1.8□□□□□ -2.12
HOXD12P35452 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.8□□□□□ -2.12
HOXD12P35452 MIR502-201ENST00000606349 86 ntBASIC1.8□□□□□ -2.12
HOXD12P35452 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HOXD12P35452 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HOXD12P35452 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HOXD12P35452 Y_RNA.23-201ENST00000362496 106 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 SNORD33-201ENST00000362761 85 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 SNORD45.3-201ENST00000363836 72 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 snoU2-30.1-201ENST00000365012 70 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 RNU6-163P-201ENST00000384396 106 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 MIR499A-201ENST00000384903 122 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 SNORD72-201ENST00000390994 80 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 RNU1-78P-201ENST00000391248 165 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 U8.16-201ENST00000391279 133 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 RNU2-55P-201ENST00000411146 174 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 SEPT7P4-201ENST00000437076 306 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 AC003989.2-201ENST00000440224 169 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 AC005908.1-201ENST00000468701 347 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 RNU6-1299P-201ENST00000516316 100 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 RNU6-1116P-201ENST00000517269 99 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 AC008507.4-201ENST00000585464 127 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 AC087685.1-201ENST00000587507 141 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 AC021506.2-201ENST00000612354 169 ntBASIC1.79□□□□□ -2.12
HOXD12P35452 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HOXD12P35452 MIRLET7C-201ENST00000362160 84 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 Y_RNA.180-201ENST00000363867 113 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 Y_RNA.357-201ENST00000365487 109 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 MIR802-201ENST00000390235 94 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 SNORA79-201ENST00000408376 140 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 RPL30P13-201ENST00000418873 348 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.78□□□□□ -2.12
HOXD12P35452 AC114811.1-201ENST00000507207 168 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 TRMT112P2-201ENST00000512910 132 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 SNORD45.4-201ENST00000516629 73 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 DNAJC19P9-201ENST00000555084 351 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 MIR4431-201ENST00000579990 94 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 AC120024.3-201ENST00000603167 156 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.78□□□□□ -2.12
HOXD12P35452 ICE2P2-201ENST00000483823 2787 ntBASIC1.77□□□□□ -2.13
HOXD12P35452 RNU6-1138P-201ENST00000365359 106 ntBASIC1.77□□□□□ -2.13
HOXD12P35452 Y_RNA.432-201ENST00000384087 111 ntBASIC1.77□□□□□ -2.13
HOXD12P35452 RNU6-424P-201ENST00000384367 105 ntBASIC1.77□□□□□ -2.13
HOXD12P35452 AC099513.1-201ENST00000490423 301 ntBASIC1.77□□□□□ -2.13
HOXD12P35452 RNU7-12P-201ENST00000516030 62 ntBASIC1.77□□□□□ -2.13
HOXD12P35452 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.77□□□□□ -2.13
HOXD12P35452 SNORA77B-201ENST00000578179 125 ntBASIC1.77□□□□□ -2.13
HOXD12P35452 AL512598.1-201ENST00000610158 273 ntBASIC1.77□□□□□ -2.13
HOXD12P35452 MIR8070-201ENST00000616510 88 ntBASIC1.77□□□□□ -2.13
HOXD12P35452 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.77□□□□□ -2.13
HOXD12P35452 SNORD14E-201ENST00000364009 85 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 Y_RNA.242-201ENST00000364473 110 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 RNU6-484P-201ENST00000384016 107 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 Y_RNA.486-201ENST00000384398 107 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 RNU4-62P-201ENST00000410125 130 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 RNU2-70P-201ENST00000410718 179 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 RNU5E-9P-201ENST00000411164 104 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 AC245517.4-201ENST00000448601 281 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 AC005840.1-201ENST00000498412 377 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 CYCTP-201ENST00000504253 315 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 RNU6-970P-201ENST00000516312 107 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 MIR4662B-201ENST00000579498 81 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 AC104465.1-201ENST00000611365 139 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 MIR7111-201ENST00000619751 72 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 MIR8063-201ENST00000621930 81 ntBASIC1.76□□□□□ -2.13
HOXD12P35452 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.76□□□□□ -2.13
HOXD12P35452 Y_RNA.441-201ENST00000384123 112 ntBASIC1.75□□□□□ -2.13
HOXD12P35452 RNU4-43P-201ENST00000410628 137 ntBASIC1.75□□□□□ -2.13
HOXD12P35452 RNU6-1135P-201ENST00000411083 103 ntBASIC1.75□□□□□ -2.13
HOXD12P35452 AC006461.1-201ENST00000412637 326 ntBASIC1.75□□□□□ -2.13
HOXD12P35452 PGBD4P5-201ENST00000445958 426 ntBASIC1.75□□□□□ -2.13
HOXD12P35452 RNU6-197P-201ENST00000516680 100 ntBASIC1.75□□□□□ -2.13
HOXD12P35452 AL513423.1-201ENST00000621695 132 ntBASIC1.75□□□□□ -2.13
HOXD12P35452 AC027279.3-201ENST00000625055 122 ntBASIC1.75□□□□□ -2.13
HOXD12P35452 Y_RNA.91-201ENST00000363042 107 ntBASIC1.74□□□□□ -2.13
HOXD12P35452 Y_RNA.634-201ENST00000364811 113 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 224.2 ms