Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 AC007012.1-201ENST00000567192 175 ntBASIC2□□□□□ -2.09
CCKBRP32239 U2.20-201ENST00000613956 192 ntBASIC2□□□□□ -2.09
CCKBRP32239 AP001318.4-201ENST00000616637 121 ntBASIC2□□□□□ -2.09
CCKBRP32239 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCKBRP32239 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
CCKBRP32239 AL596028.1-201ENST00000326971 197 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 Y_RNA.85-201ENST00000363014 111 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 Y_RNA.328-201ENST00000365208 113 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 RNU1-148P-201ENST00000384472 162 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 MIR624-201ENST00000385217 97 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 SNORD12C-201ENST00000386307 89 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CCKBRP32239 SNORA12.1-201ENST00000390873 148 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 SNORD72-201ENST00000390994 80 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 RNA5SP127-201ENST00000411051 133 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 RNA5SP270-201ENST00000411361 118 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.99□□□□□ -2.09
CCKBRP32239 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.99□□□□□ -2.09
CCKBRP32239 RPS27P22-201ENST00000478056 241 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 RNU7-193P-201ENST00000516723 65 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 RNU6-365P-201ENST00000517113 106 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 MIR3126-201ENST00000577443 74 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 MIR3129-201ENST00000581095 76 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 MIR6840-201ENST00000611937 71 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 U4atac.1-201ENST00000618345 95 ntBASIC1.99□□□□□ -2.09
CCKBRP32239 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCKBRP32239 MIR340-201ENST00000362125 95 ntBASIC1.98□□□□□ -2.09
CCKBRP32239 RNU6-766P-201ENST00000362478 107 ntBASIC1.98□□□□□ -2.09
CCKBRP32239 MIR488-201ENST00000365739 83 ntBASIC1.98□□□□□ -2.09
CCKBRP32239 RNU6-756P-201ENST00000383997 107 ntBASIC1.98□□□□□ -2.09
CCKBRP32239 AC019129.1-201ENST00000403786 261 ntBASIC1.98□□□□□ -2.09
CCKBRP32239 AF228730.3-201ENST00000436691 102 ntBASIC1.98□□□□□ -2.09
CCKBRP32239 AC104435.1-201ENST00000483483 166 ntBASIC1.98□□□□□ -2.09
CCKBRP32239 NDUFA4P2-201ENST00000489989 244 ntBASIC1.98□□□□□ -2.09
CCKBRP32239 RNA5SP182-201ENST00000516064 82 ntBASIC1.98□□□□□ -2.09
CCKBRP32239 RNA5SP458-201ENST00000516188 119 ntBASIC1.98□□□□□ -2.09
CCKBRP32239 AL365205.2-201ENST00000594586 68 ntBASIC1.98□□□□□ -2.09
CCKBRP32239 AL035470.1-201ENST00000622571 220 ntBASIC1.98□□□□□ -2.09
CCKBRP32239 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CCKBRP32239 AC245060.5-201ENST00000610778 3293 ntBASIC1.97□□□□□ -2.09
CCKBRP32239 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CCKBRP32239 RNU1-22P-201ENST00000363334 158 ntBASIC1.97□□□□□ -2.09
CCKBRP32239 Y_RNA.163-201ENST00000363702 113 ntBASIC1.97□□□□□ -2.09
CCKBRP32239 Y_RNA.332-201ENST00000365271 113 ntBASIC1.97□□□□□ -2.09
CCKBRP32239 RNU6-1138P-201ENST00000365359 106 ntBASIC1.97□□□□□ -2.09
CCKBRP32239 Y_RNA.366-201ENST00000365540 102 ntBASIC1.97□□□□□ -2.09
CCKBRP32239 SNORA26.2-201ENST00000390922 122 ntBASIC1.97□□□□□ -2.09
CCKBRP32239 AC123900.1-201ENST00000420390 96 ntBASIC1.97□□□□□ -2.09
CCKBRP32239 OR9P1P-201ENST00000496431 281 ntBASIC1.97□□□□□ -2.09
CCKBRP32239 AC011604.1-201ENST00000545978 196 ntBASIC1.97□□□□□ -2.09
CCKBRP32239 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.97□□□□□ -2.09
CCKBRP32239 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.96□□□□□ -2.1
CCKBRP32239 SNORD114-6-201ENST00000364393 72 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 SNORA51.5-201ENST00000384126 131 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 SNORD61-201ENST00000384252 73 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 RNU6-1235P-201ENST00000384559 107 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 MIR583-201ENST00000384846 75 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 RNU6-498P-201ENST00000459468 107 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 RNU6-109P-201ENST00000516364 107 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 RNU6-948P-201ENST00000516374 107 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 RNU6-412P-201ENST00000516434 106 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 RNU6-184P-201ENST00000516514 107 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 AC062037.1-201ENST00000605302 128 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 MIR6845-201ENST00000613182 61 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 MIR376A2-201ENST00000636782 80 ntBASIC1.96□□□□□ -2.1
CCKBRP32239 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.96□□□□□ -2.1
CCKBRP32239 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
CCKBRP32239 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCKBRP32239 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCKBRP32239 RNU6-1240P-201ENST00000365155 104 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 RNU6-1014P-201ENST00000383940 103 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 RNY1P7-201ENST00000384743 110 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 MIR570-201ENST00000384917 97 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 RNU6-440P-201ENST00000390882 105 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 SNORA19.1-201ENST00000410656 129 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 MRPS17P9-201ENST00000511924 393 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 AC097462.1-201ENST00000514125 324 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 RNU7-172P-201ENST00000517125 64 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 RNU6-1270P-201ENST00000517128 108 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 MIR2681-201ENST00000581814 105 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCKBRP32239 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.95□□□□□ -2.1
CCKBRP32239 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.95□□□□□ -2.1
CCKBRP32239 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CCKBRP32239 SNORA63.5-201ENST00000363548 123 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 MT-TI-201ENST00000387365 69 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 AC060773.1-201ENST00000421698 310 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 MTATP6P21-201ENST00000440681 189 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 AC023449.1-201ENST00000454464 154 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 RPL39P34-201ENST00000477141 156 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 RPS27P21-201ENST00000486977 252 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 Y_RNA.666-201ENST00000516187 112 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 RNU6-1149P-201ENST00000516810 97 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 SCARNA15-202ENST00000516881 127 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 MIR4438-201ENST00000585271 93 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 U6.73-201ENST00000619194 103 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 AC006435.5-201ENST00000624486 112 ntBASIC1.94□□□□□ -2.1
CCKBRP32239 RNA5SP173-201ENST00000364857 136 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 251.9 ms