Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNU6-961P-201ENST00000363893 105 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 RNU6-756P-201ENST00000383997 107 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 RNU6-259P-201ENST00000383999 107 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 RNU6-842P-201ENST00000384269 107 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 RNU6-318P-201ENST00000384283 103 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 SNORA40.5-201ENST00000391061 128 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 MTCO3P40-201ENST00000392516 676 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
COL4A5P29400 MIR1257-201ENST00000408490 117 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 RNU2-61P-201ENST00000411069 191 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.29□□□□□ -2.46
COL4A5P29400 AC024067.1-201ENST00000426199 223 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL4A5P29400 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL4A5P29400 RNU7-73P-201ENST00000458743 63 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 AC006362.1-201ENST00000567392 174 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 AC005176.2-201ENST00000596933 147 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 AC006157.1-201ENST00000611750 366 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 AC091304.10-201ENST00000641554 121 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 MIR760-201ENST00000390220 80 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 RNU6-269P-201ENST00000391077 97 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 SNORD115-47-201ENST00000391226 86 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 RNU6-602P-201ENST00000411155 105 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 AC096531.1-201ENST00000419107 107 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 SNRPGP14-201ENST00000435400 219 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 PRDX4P1-201ENST00000507189 574 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 RNU6-835P-201ENST00000516974 104 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 AC133485.4-201ENST00000561835 220 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 AC134878.1-201ENST00000619901 243 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 AC092794.2-201ENST00000620933 563 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 SNORD115-24-201ENST00000363528 82 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 SNORD114-3-201ENST00000364969 75 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 MT-TF-201ENST00000387314 71 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 SNORA69.1-201ENST00000390904 137 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 SNORD93-201ENST00000408813 74 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 FCF1P9-201ENST00000412546 282 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 MTCO1P5-201ENST00000433573 344 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 AC092447.9-201ENST00000603395 144 ntBASIC-0.3□□□□□ -2.46
COL4A5P29400 SNORD14C-201ENST00000365382 88 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 SNORD116-9-201ENST00000384000 95 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 SNORD116-3-201ENST00000384287 95 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 SNORD116-8-201ENST00000384365 95 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 SNORD116-7-201ENST00000384404 95 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 SNORD116-5-201ENST00000384462 95 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 RNU6-601P-201ENST00000384540 107 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 MIR548H2-201ENST00000408874 88 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.31□□□□□ -2.46
COL4A5P29400 AC005042.3-201ENST00000453230 174 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 MIR2053-201ENST00000459295 91 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 RNU7-66P-201ENST00000459469 62 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 RPL39P34-201ENST00000477141 156 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.31□□□□□ -2.46
COL4A5P29400 AP003357.1-201ENST00000604497 148 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.31□□□□□ -2.46
COL4A5P29400 AC098679.4-201ENST00000624241 654 ntBASIC-0.31□□□□□ -2.46
COL4A5P29400 RNU6-740P-201ENST00000364734 105 ntBASIC-0.32□□□□□ -2.46
COL4A5P29400 SNORA24-201ENST00000384096 131 ntBASIC-0.32□□□□□ -2.46
COL4A5P29400 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.32□□□□□ -2.46
COL4A5P29400 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.32□□□□□ -2.46
COL4A5P29400 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.32□□□□□ -2.46
COL4A5P29400 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.32□□□□□ -2.46
COL4A5P29400 RNU7-165P-201ENST00000458864 60 ntBASIC-0.32□□□□□ -2.46
COL4A5P29400 RNU6-307P-201ENST00000516743 106 ntBASIC-0.32□□□□□ -2.46
COL4A5P29400 AC011921.3-201ENST00000605540 361 ntBASIC-0.32□□□□□ -2.46
COL4A5P29400 MIR499B-201ENST00000636498 73 ntBASIC-0.32□□□□□ -2.46
COL4A5P29400 MIR3662-201ENST00000637030 95 ntBASIC-0.32□□□□□ -2.46
COL4A5P29400 MTND5P26-201ENST00000426018 1752 ntBASIC-0.32□□□□□ -2.46
COL4A5P29400 MTND5P32-201ENST00000560711 1802 ntBASIC-0.32□□□□□ -2.46
COL4A5P29400 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 RNU6-306P-201ENST00000384617 107 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 PCNPP3-201ENST00000393579 471 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 AC090844.1-201ENST00000422019 156 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.33□□□□□ -2.46
COL4A5P29400 RNU6-415P-201ENST00000516252 97 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 RNU7-115P-201ENST00000516433 55 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 FTX_2.1-201ENST00000618816 94 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 AL391262.2-201ENST00000622466 494 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
COL4A5P29400 SNORA75.4-201ENST00000391278 119 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 AC074085.1-201ENST00000413598 418 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.33□□□□□ -2.46
COL4A5P29400 RNU7-129P-201ENST00000516128 62 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 AC006600.1-201ENST00000572529 153 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 AC008507.4-201ENST00000585464 127 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 AC018638.8-201ENST00000588755 281 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 MIR6740-201ENST00000618268 113 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 AL391099.1-201ENST00000624635 187 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms