Protein–RNA interactions for Protein: P10600

TGFB3, Transforming growth factor beta-3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3P10600 MIR4438-201ENST00000585271 93 ntBASIC1.93□□□□□ -2.1
TGFB3P10600 RPL17P51-201ENST00000605218 238 ntBASIC1.93□□□□□ -2.1
TGFB3P10600 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.93□□□□□ -2.1
TGFB3P10600 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
TGFB3P10600 SNORD114-7-201ENST00000362520 77 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 SNORA63.4-201ENST00000362763 126 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 RNU6-199P-201ENST00000362954 107 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 Y_RNA.140-201ENST00000363474 103 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 RNU6-674P-201ENST00000363831 107 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 Y_RNA.332-201ENST00000365271 113 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 SNORA40.5-201ENST00000391061 128 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 SNORA17.3-201ENST00000391159 129 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 AL117342.1-201ENST00000404861 406 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 FTH1P12-201ENST00000432137 551 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 HMGN2P34-201ENST00000437647 269 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 RNU6-970P-201ENST00000516312 107 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 MIR3618-201ENST00000580330 88 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 MIR4422-201ENST00000581938 83 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.92□□□□□ -2.1
TGFB3P10600 MIR8074-201ENST00000615081 81 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 MIR376A2-201ENST00000636782 80 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 MIR6844-201ENST00000637122 62 ntBASIC1.92□□□□□ -2.1
TGFB3P10600 RNU6-1240P-201ENST00000365155 104 ntBASIC1.91□□□□□ -2.1
TGFB3P10600 Y_RNA.521-201ENST00000384560 114 ntBASIC1.91□□□□□ -2.1
TGFB3P10600 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TGFB3P10600 AC008267.6-201ENST00000441664 139 ntBASIC1.91□□□□□ -2.1
TGFB3P10600 RPL36AP21-201ENST00000490372 323 ntBASIC1.91□□□□□ -2.1
TGFB3P10600 RNU4-57P-201ENST00000515980 135 ntBASIC1.91□□□□□ -2.1
TGFB3P10600 RNU6-948P-201ENST00000516374 107 ntBASIC1.91□□□□□ -2.1
TGFB3P10600 RNU6-856P-201ENST00000516959 98 ntBASIC1.91□□□□□ -2.1
TGFB3P10600 AC073413.2-201ENST00000604332 360 ntBASIC1.91□□□□□ -2.1
TGFB3P10600 AC022513.1-201ENST00000624512 117 ntBASIC1.91□□□□□ -2.1
TGFB3P10600 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.91□□□□□ -2.1
TGFB3P10600 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.9□□□□□ -2.1
TGFB3P10600 RNU6-457P-201ENST00000363999 107 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 Y_RNA.203-201ENST00000364106 102 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 Y_RNA.280-201ENST00000364765 112 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 Y_RNA.486-201ENST00000384398 107 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 SNORD72-201ENST00000390994 80 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 AL606517.2-201ENST00000442855 241 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 RNU6-1041P-201ENST00000516254 102 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 RNU6-1291P-201ENST00000516591 104 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 RNU7-172P-201ENST00000517125 64 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 IGKV1-22-201ENST00000524313 326 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 AC007751.1-201ENST00000529260 376 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 AC011604.1-201ENST00000545978 196 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.9□□□□□ -2.11
TGFB3P10600 MIR378D2-201ENST00000580636 98 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 AC091178.2-201ENST00000584401 117 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 AC011603.4-201ENST00000611325 277 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 MIR6129-201ENST00000616087 109 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 U6.73-201ENST00000619194 103 ntBASIC1.9□□□□□ -2.11
TGFB3P10600 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TGFB3P10600 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
TGFB3P10600 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
TGFB3P10600 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TGFB3P10600 Y_RNA.66-201ENST00000362862 102 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 RNA5SP493-201ENST00000364115 91 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 SNORA25.7-201ENST00000364375 127 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 RNU6-309P-201ENST00000364573 106 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 Y_RNA.634-201ENST00000364811 113 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 RNU6-1325P-201ENST00000364905 105 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 SNORD50B-201ENST00000364995 70 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 RNU6-438P-201ENST00000365561 103 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 SNORA1-201ENST00000384107 130 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 RNU6-80P-201ENST00000384195 107 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 SNORA72-201ENST00000384339 132 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 MIR562-201ENST00000384894 95 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 SNORA12.1-201ENST00000390873 148 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 Y_RNA.629-201ENST00000411368 105 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.89□□□□□ -2.11
TGFB3P10600 MLLT10P1-201ENST00000418346 262 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 AC123900.1-201ENST00000420390 96 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 AL035461.1-201ENST00000421490 332 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 SNRPGP10-201ENST00000432323 225 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 AC074290.1-201ENST00000448883 135 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 RPS27P1-201ENST00000450552 247 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 SNORD77.4-201ENST00000516158 81 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 RNU6-197P-201ENST00000516680 100 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 RNU6-1096P-201ENST00000517089 102 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 MIR5688-201ENST00000580619 83 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 AL159152.1-201ENST00000635019 2587 ntBASIC1.89□□□□□ -2.11
TGFB3P10600 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.88□□□□□ -2.11
TGFB3P10600 RNU6-271P-201ENST00000363858 105 ntBASIC1.88□□□□□ -2.11
TGFB3P10600 RNU6-597P-201ENST00000365620 102 ntBASIC1.88□□□□□ -2.11
TGFB3P10600 RNU6-1186P-201ENST00000410429 97 ntBASIC1.88□□□□□ -2.11
TGFB3P10600 RNU6-781P-201ENST00000516377 101 ntBASIC1.88□□□□□ -2.11
TGFB3P10600 RNU7-149P-201ENST00000516739 59 ntBASIC1.88□□□□□ -2.11
TGFB3P10600 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.88□□□□□ -2.11
TGFB3P10600 AP001328.1-201ENST00000528550 176 ntBASIC1.88□□□□□ -2.11
TGFB3P10600 uc_338.4-201ENST00000616635 176 ntBASIC1.88□□□□□ -2.11
TGFB3P10600 AP001340.1-201ENST00000624405 217 ntBASIC1.88□□□□□ -2.11
TGFB3P10600 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TGFB3P10600 MIR126-201ENST00000362291 85 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 RNU6-414P-201ENST00000363705 104 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 RNU4-13P-201ENST00000364019 141 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 RNU1-96P-201ENST00000364163 162 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 RNU6-153P-201ENST00000364422 104 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms