Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC024995.1-201ENST00000523014 93 ntBASIC3.43□□□□□ -1.86
CSB-PGBD3P0DP91 AC134878.1-201ENST00000619901 243 ntBASIC3.43□□□□□ -1.86
CSB-PGBD3P0DP91 MIR6079-201ENST00000635807 62 ntBASIC3.43□□□□□ -1.86
CSB-PGBD3P0DP91 AC018630.2-201ENST00000534866 2403 ntBASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 MIR302B-201ENST00000362188 73 ntBASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 RNU6-1189P-201ENST00000383958 107 ntBASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 MIR548D2-201ENST00000384955 97 ntBASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 RNA5SP425-201ENST00000410336 112 ntBASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 PGBD4P5-201ENST00000445958 426 ntBASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 RNU7-164P-201ENST00000459221 62 ntBASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 AC026421.1-201ENST00000519101 163 ntBASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CSB-PGBD3P0DP91 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 ZNF720P1-201ENST00000562403 1939 ntBASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 Y_RNA.265-201ENST00000364677 108 ntBASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 MIR759-201ENST00000390224 91 ntBASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 U8.17-201ENST00000391292 132 ntBASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 FTH1P12-201ENST00000432137 551 ntBASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 AP004217.1-201ENST00000480579 346 ntBASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 SNORA9.3-201ENST00000516383 129 ntBASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 RNU7-25P-201ENST00000516544 62 ntBASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 SNORD36C-201ENST00000516733 66 ntBASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 RNA5SP137-201ENST00000516833 135 ntBASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 RNU6-341P-201ENST00000516973 96 ntBASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 MIR2052-201ENST00000636055 55 ntBASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CSB-PGBD3P0DP91 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.4□□□□□ -1.86
CSB-PGBD3P0DP91 SNORA63D-201ENST00000364359 132 ntBASIC3.4□□□□□ -1.87
CSB-PGBD3P0DP91 RNU6-1134P-201ENST00000365156 101 ntBASIC3.4□□□□□ -1.87
CSB-PGBD3P0DP91 Y_RNA.410-201ENST00000383992 113 ntBASIC3.4□□□□□ -1.87
CSB-PGBD3P0DP91 SNORD78.1-201ENST00000390866 65 ntBASIC3.4□□□□□ -1.87
CSB-PGBD3P0DP91 BX510359.4-201ENST00000423750 193 ntBASIC3.4□□□□□ -1.87
CSB-PGBD3P0DP91 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.4□□□□□ -1.87
CSB-PGBD3P0DP91 AC099677.2-201ENST00000436385 175 ntBASIC3.4□□□□□ -1.87
CSB-PGBD3P0DP91 RNA5SP57-201ENST00000459463 123 ntBASIC3.4□□□□□ -1.87
CSB-PGBD3P0DP91 AC087685.1-201ENST00000587507 141 ntBASIC3.4□□□□□ -1.87
CSB-PGBD3P0DP91 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CSB-PGBD3P0DP91 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CSB-PGBD3P0DP91 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CSB-PGBD3P0DP91 SNORA1B-201ENST00000362535 133 ntBASIC3.39□□□□□ -1.87
CSB-PGBD3P0DP91 Y_RNA.93-201ENST00000363066 109 ntBASIC3.39□□□□□ -1.87
CSB-PGBD3P0DP91 AL163195.1-201ENST00000496941 348 ntBASIC3.39□□□□□ -1.87
CSB-PGBD3P0DP91 AC005786.1-201ENST00000588553 154 ntBASIC3.39□□□□□ -1.87
CSB-PGBD3P0DP91 AC002984.1-201ENST00000591692 448 ntBASIC3.39□□□□□ -1.87
CSB-PGBD3P0DP91 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.39□□□□□ -1.87
CSB-PGBD3P0DP91 AL162726.3-218ENST00000636401 95 ntBASIC3.39□□□□□ -1.87
CSB-PGBD3P0DP91 AP006437.1-201ENST00000641440 3685 ntBASIC3.39□□□□□ -1.87
CSB-PGBD3P0DP91 Y_RNA.37-201ENST00000362606 108 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 Y_RNA.107-201ENST00000363190 121 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 Y_RNA.219-201ENST00000364232 113 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 RNY1P6-201ENST00000384193 109 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 RPL21P3-201ENST00000395517 478 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 SNORA11.4-201ENST00000408823 129 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 Y_RNA.593-201ENST00000410292 98 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 RNU6-938P-201ENST00000411285 103 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 RNU6-893P-201ENST00000458841 100 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 RNU7-94P-201ENST00000459576 63 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 MIR4648-201ENST00000580107 72 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 AC006441.5-201ENST00000612680 209 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 AC093831.2-201ENST00000624393 3427 ntBASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CSB-PGBD3P0DP91 AC008264.2-201ENST00000610193 3731 ntBASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 U8.9-201ENST00000365667 134 ntBASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 Y_RNA.466-201ENST00000384294 113 ntBASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 Y_RNA.547-201ENST00000384654 119 ntBASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 RN7SKP223-201ENST00000410582 62 ntBASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 AC109327.2-201ENST00000448339 378 ntBASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 RPL39P25-201ENST00000449384 154 ntBASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 RNU2-35P-201ENST00000516446 142 ntBASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 HSPE1P19-201ENST00000603327 295 ntBASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 AC022513.1-201ENST00000624512 117 ntBASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSB-PGBD3P0DP91 SNORD115-28-201ENST00000363931 81 ntBASIC3.36□□□□□ -1.87
CSB-PGBD3P0DP91 Y_RNA.440-201ENST00000384120 114 ntBASIC3.36□□□□□ -1.87
CSB-PGBD3P0DP91 SNRPGP14-201ENST00000435400 219 ntBASIC3.36□□□□□ -1.87
CSB-PGBD3P0DP91 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.36□□□□□ -1.87
CSB-PGBD3P0DP91 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.36□□□□□ -1.87
CSB-PGBD3P0DP91 AL358944.1-201ENST00000528537 144 ntBASIC3.36□□□□□ -1.87
CSB-PGBD3P0DP91 MIR4506-201ENST00000584693 77 ntBASIC3.36□□□□□ -1.87
CSB-PGBD3P0DP91 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.36□□□□□ -1.87
CSB-PGBD3P0DP91 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CSB-PGBD3P0DP91 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 RNU6-268P-201ENST00000364174 107 ntBASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 Y_RNA.242-201ENST00000364473 110 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms